Naga_100197g10, gene2662 (gene) Nannochloropsis gaditana

Overview
NameNaga_100197g10
Unique Namegene2662
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1189768..1193499 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100197g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1189768..1193499 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G04970NO05G04970Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2782rna2782-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2782rna2782Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2782

>rna2782-protein ID=rna2782-protein|Name=rna2782|organism=Nannochloropsis gaditana|type=polypeptide|length=589bp
MGGTEEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHT
GFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETA
PEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFV
RFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMG
MHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGD
IIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPA
RAEGRRMGGMGGGMEGGMGMAGYPAMYATVGPGAGGGGYYPPTSHLHPPH
PQHPPTHSPQAPPTQSGYHYAPGPIPYPPSSSSYLPPYHPQQPSPAQAAS
LYHPSQGGGGTHPYTHLSYSYQSHLHAPPHSLPPLAPGQDRGGYPPGGFS
PQGSPDGREGGREGLPTLYYGDPGHSQPHRPPGPGGRKVGRIGGGRDGGM
TALTARLDGLDMSGNTGGGEGFAKGGLPPGGPGGVRGGYGGGGGGGSRKG
SYRMQQGGYGYSLHGGGGGGGRGGGAGGEGGYGGMYPPR
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Synonyms
Publications