Mbb1, gene1781 (gene) Nannochloropsis gaditana

Overview
NameMbb1
Unique Namegene1781
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:321770..326168 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g160
Gene biotypeprotein_coding
GeneMbb1
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:321770..326168 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04340NO04G04340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1864rna1864-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1865rna1865-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1864rna1864Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1865rna1865Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1864

>rna1864-protein ID=rna1864-protein|Name=rna1864|organism=Nannochloropsis gaditana|type=polypeptide|length=711bp
MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRP
LHQGAFLSPRTPFRWGSKSRSNSDSTQTKPSEDAFCSTCNFMAASVSFSP
TLVLPASRTDDVTSPHAAPADPPADFAPPISPPGTNLMKGGKGSIGNSKN
SNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPL
SSLERAKARMPRLEERVAEEVEGSVGETGWGNQDEDEGAGTVRMGYREGD
VAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERML
EEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRC
MELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGV
FQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQ
TAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAW
AVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSL
FRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQ
AFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGESG
LLLSSPYLSCIALGWWEEFHVPLLGRSFSGSLLFVEYKIEWHEQRGVSVR
QGKDIADFLTG
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protein sequence of rna1865

>rna1865-protein ID=rna1865-protein|Name=rna1865|organism=Nannochloropsis gaditana|type=polypeptide|length=887bp
MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRP
LHQGAFLSPRTPFRWGSKSRSNSDSTQTKPSEDAFCSTCNFMAASVSFSP
TLVLPASRTDDVTSPHAAPADPPADFAPPISPPGTNLMKGGKGSIGNSKN
SNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPL
SSLERAKARMPRLEERVAEEVEGSVGETGWGNQDEDEGAGTVRMGYREGD
VAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERML
EEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRC
MELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGV
FQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQ
TAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAW
AVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSL
FRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQ
AFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFE
LARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEA
EIYWTQYEVMERRFGHVEHAMRIEQRRHLAFGGKSGGGPHGGGGGTRDAK
QGGRGVEGYDKGSRMMGLFDSFQEVYALPRGTMEEEKGRGRIWGPLGGKD
RAKRSVGWRADGQSKGREADEEQEEAEHSREQPQRGRIGGSATGVFPPPS
PRRSREDAPVFDTFLEGGFTREGETGQLHGNVTLGIA
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Synonyms
Publications