EWM23909.1, cds6772 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|585105191|gb|EWM23909.1| (neuro-oncological ventral antigen 2 [Nannochloropsis gaditana]) HSP 1 Score: 1311.98 bits (3394), Expect = 0.000e+0 Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 0
Query: 1 MAEPTSAETSMNHAPPVFRAEGGDTPTETSRNGKGAPGDNPEADSEFDTHRGGSNASLAFGSELHQGENDEEAVKSPSSAAVAAPTASGKSRPPALSDNLLHSSLANISIHSSPAHDHGMLPGASGHRGGATDVPSAVKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRAVSLRAGEEGGVEDVSSKEAYREAGTRDGPGAGGSGRPVPAKEVPGASSPPSPSSPSPSLPTSADSFSDGDESNSHGPRSEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGPLPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGPASTRGHALNLSLSGSEGQRGHLSRSQGLGHSQARQSQLHSHGPAPIPLSAPLSASHPLSYMHPPPDRGPPHPPLPPFPPQHPSALHSARQAPPRHHGSGPPSGHSSPSLMPQHLLYTGHAPPSYQHMAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAVQQASMGPLQGSY 660
MAEPTSAETSMNHAPPVFRAEGGDTPTETSRNGKGAPGDNPEADSEFDTHRGGSNASLAFGSELHQGENDEEAVKSPSSAAVAAPTASGKSRPPALSDNLLHSSLANISIHSSPAHDHGMLPGASGHRGGATDVPSAVKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRAVSLRAGEEGGVEDVSSKEAYREAGTRDGPGAGGSGRPVPAKEVPGASSPPSPSSPSPSLPTSADSFSDGDESNSHGPRSEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGPLPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGPASTRGHALNLSLSGSEGQRGHLSRSQGLGHSQARQSQLHSHGPAPIPLSAPLSASHPLSYMHPPPDRGPPHPPLPPFPPQHPSALHSARQAPPRHHGSGPPSGHSSPSLMPQHLLYTGHAPPSYQHMAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAVQQASMGPLQGSY
Sbjct: 1 MAEPTSAETSMNHAPPVFRAEGGDTPTETSRNGKGAPGDNPEADSEFDTHRGGSNASLAFGSELHQGENDEEAVKSPSSAAVAAPTASGKSRPPALSDNLLHSSLANISIHSSPAHDHGMLPGASGHRGGATDVPSAVKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRAVSLRAGEEGGVEDVSSKEAYREAGTRDGPGAGGSGRPVPAKEVPGASSPPSPSSPSPSLPTSADSFSDGDESNSHGPRSEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGPLPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGPASTRGHALNLSLSGSEGQRGHLSRSQGLGHSQARQSQLHSHGPAPIPLSAPLSASHPLSYMHPPPDRGPPHPPLPPFPPQHPSALHSARQAPPRHHGSGPPSGHSSPSLMPQHLLYTGHAPPSYQHMAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAVQQASMGPLQGSY 660
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|553178840|ref|XP_005852612.1| (rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >gi|553194859|ref|XP_005856042.1| rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >gi|422293017|gb|EKU20318.1| rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >gi|422295921|gb|EKU23220.1| rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 473.396 bits (1217), Expect = 8.298e-162 Identity = 243/247 (98.38%), Postives = 243/247 (98.38%), Query Frame = 0
Query: 226 AGEEGGVEDVSSKEAYREAGTRDGPGAGGSGRPVPAKEVPGASSPPSPSSPSPSLPTSADSFSDGDESNSHGPRSEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGPLPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGPASTRGHALNLSLSGSEGQRGHLSRSQGLGHSQARQSQ 472
AGEEGGVEDVSSKEAYREAGTRDG GAGGSGRPVPAKEVPGASSPPSPSSPSPSLPTSADSFSDGDESNSHG SEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAG LPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGPASTRGHALNLSLSGSEGQRGHLSRSQGLGHSQARQSQ
Sbjct: 1 AGEEGGVEDVSSKEAYREAGTRDGLGAGGSGRPVPAKEVPGASSPPSPSSPSPSLPTSADSFSDGDESNSHG--SEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGALPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGPASTRGHALNLSLSGSEGQRGHLSRSQGLGHSQARQSQ 245
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|1169033805|ref|XP_020469147.1| (RNA-binding protein Nova-1 isoform X2 [Monopterus albus]) HSP 1 Score: 107.457 bits (267), Expect = 4.099e-21 Identity = 103/349 (29.51%), Postives = 166/349 (47.56%), Query Frame = 0
Query: 315 KLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGPLPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHP--------AFDLPTYQTQSFADTQMLFS----PQGPASTRGHALNLSLS---GSEGQRGHLSRSQGLGHSQARQSQLHSHGPAPIPLSAPLSASHPLSYMHPPPDRGPPHPPLPPFPPQHPSALHSARQAPPRHHGSGPPSGHSSPSLMPQHLLYTGHAPPSYQHMAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAV 648
KL++ + GL+IG+ G+T+KA+ E++G +QL+ K E G+ ERVVTI+G + V +++K+ E+P+ + N+ SYS V + +P A LP + +++L P +S G+ L L+++ + G+ + + GLG + A S + A ++AS R P + HP+ G G G S SL G+ S MA + LA + D A V+ + VP+ L+G+ILG+ G TL + Q +GARI ISK+GEF PGT+NR VTI G T+ A+ +++ +
Sbjct: 107 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPE--GINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI--SYSNVSGPVANSNPTGSPYANTAEVLPNAAAAAATASRLLTGMGAFPTAMSSFSGNDL-LAITSALNTLASYGYNTNTLGLGLNPAAASGVL----------AAVAASAKPGGAGGGKPRVPSYASDASSSAGHPAT------------GLG---GFSLGSLAAATGASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 425 HSP 2 Score: 65.4698 bits (158), Expect = 1.351e-7 Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 138 VKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAE 193
+K+L+ + AG ++GKGG TI LQ+ETGA IKLS+++D++PGT +RV LI G E
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE 63
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|1169033803|ref|XP_020469146.1| (RNA-binding protein Nova-1 isoform X1 [Monopterus albus]) HSP 1 Score: 79.337 bits (194), Expect = 6.711e-12 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0
Query: 562 MAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAV 648
MA + LA + D A V+ + VP+ L+G+ILG+ G TL + Q +GARI ISK+GEF PGT+NR VTI G T+ A+ +++ +
Sbjct: 396 MASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 482 HSP 2 Score: 65.855 bits (159), Expect = 1.464e-7 Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 138 VKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAE 193
+K+L+ + AG ++GKGG TI LQ+ETGA IKLS+++D++PGT +RV LI G E
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE 120
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|1174650402|ref|XP_020563699.1| (RNA-binding protein Nova-1-like [Oryzias latipes]) HSP 1 Score: 76.2554 bits (186), Expect = 6.348e-11 Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 0
Query: 562 MAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAV 648
+A + LA + + A V+ + VP+ L+G+ILG+ G TL + Q +GARI ISK+GEF PGT+NR VTI G T+ A+ +++ +
Sbjct: 418 VASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRI 504 HSP 2 Score: 65.4698 bits (158), Expect = 1.559e-7 Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 138 VKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAE 193
+K+L+ + AG ++GKGG TI LQ+ETGA IKLS+++D++PGT +RV LI G E
Sbjct: 82 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE 137
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|113677906|ref|NP_001038254.1| (neuro-oncological ventral antigen 1 [Danio rerio] >gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio] >gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]) HSP 1 Score: 75.8702 bits (185), Expect = 8.702e-11 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0
Query: 553 GHAPPSYQHMAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAV 648
G+ PS +A + L + + V+ + VP+ L+G+ILG+ G TL + Q +GARI ISK+GEF PGT+NR VTI G T+ A+ +++ +
Sbjct: 385 GYLNPSSPLVASSLLGTEKLAEGGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 480 HSP 2 Score: 65.4698 bits (158), Expect = 1.662e-7 Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 138 VKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAE 193
+K+L+ + AG ++GKGG TI LQ+ETGA IKLS+++D++PGT +RV LI G E
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE 114
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|528479837|ref|XP_005165375.1| (neuro-oncological ventral antigen 1 isoform X1 [Danio rerio]) HSP 1 Score: 75.485 bits (184), Expect = 1.023e-10 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0
Query: 553 GHAPPSYQHMAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAV 648
G+ PS +A + L + + V+ + VP+ L+G+ILG+ G TL + Q +GARI ISK+GEF PGT+NR VTI G T+ A+ +++ +
Sbjct: 334 GYLNPSSPLVASSLLGTEKLAEGGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 429 HSP 2 Score: 65.0846 bits (157), Expect = 2.085e-7 Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 138 VKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAE 193
+K+L+ + AG ++GKGG TI LQ+ETGA IKLS+++D++PGT +RV LI G E
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE 63
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|1042345644|ref|XP_017315388.1| (PREDICTED: RNA-binding protein Nova-1-like isoform X1 [Ictalurus punctatus]) HSP 1 Score: 73.9442 bits (180), Expect = 3.692e-10 Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 0
Query: 562 MAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAV 648
+A + L + + VL + VP+ L+G+ILG+ G TL + Q +GARI ISK+GEF PGT+NR VTI G T+ A+ +++ +
Sbjct: 405 VASSLLGTEKLAEGGKEVLEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 491 HSP 2 Score: 65.4698 bits (158), Expect = 1.546e-7 Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 138 VKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAE 193
+K+L+ + AG ++GKGG TI LQ+ETGA IKLS+++D++PGT +RV LI G E
Sbjct: 70 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE 125
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|1042345646|ref|XP_017315389.1| (PREDICTED: RNA-binding protein Nova-1-like isoform X2 [Ictalurus punctatus]) HSP 1 Score: 73.559 bits (179), Expect = 3.792e-10 Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 0
Query: 562 MAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAV 648
+A + L + + VL + VP+ L+G+ILG+ G TL + Q +GARI ISK+GEF PGT+NR VTI G T+ A+ +++ +
Sbjct: 343 VASSLLGTEKLAEGGKEVLEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 429 HSP 2 Score: 65.0846 bits (157), Expect = 1.704e-7 Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 138 VKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAE 193
+K+L+ + AG ++GKGG TI LQ+ETGA IKLS+++D++PGT +RV LI G E
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE 63
BLAST of EWM23909.1 vs. NCBI_GenBank
Match: gi|1099182085|ref|XP_018870197.1| (PREDICTED: RNA-binding protein Nova-2 [Gorilla gorilla gorilla]) HSP 1 Score: 71.633 bits (174), Expect = 1.038e-9 Identity = 38/84 (45.24%), Postives = 57/84 (67.86%), Query Frame = 0
Query: 566 FL-AMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAV 648
FL A + A ++A ++ + VP+ L+G+ILG+ G TL + Q +GARI ISK+GEF PGT+NR VTI G T+ A+ +++ V
Sbjct: 264 FLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 347 The following BLAST results are available for this feature:
BLAST of EWM23909.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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