jgi.p|Nanoce1779_2|672269, mRNA_6820 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|672269
Unique Name	mRNA_6820
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5074
Alignment location	scaffold_17:182451..187524 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	672355
Track	FilteredModels2
ProteinId	672269

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_17	supercontig	scaffold_17:182451..187524 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|672269	gene_6820	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|672269	mRNA_6820-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6820	CDS_6820	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_17:182451..187524+
coding sequence from alignment at scaffold_17:182451..187524+

mRNA sequence

>mRNA_6820 ID=mRNA_6820|Name=jgi.p|Nanoce1779_2|672269|organism=Nannochloropsis oceanica|type=mRNA|length=5074bp
ACAGCGTGACGACGCGATGCCGGGCTTCACGGTGGGTTGTCCGCAGCGGC
TGGCGGTGCGGCAGGGGGACAGCGTCCGGCACACGACCAGTGTCCTCGGC
ATGGCCTCCGATCCGACGGGACAGTACTTCGCCATCTTGACGCGGCACGA
CTTGCAAGTCTGGAGCGGGGGGCACCACCAACTGCTGCTTGGGTGGTCCA
CCACAAATAACAATGCAACGGCAGCTGCTTCAGAAGGCCAAAGTGACACC
GATGAGGCCGGTTTGCAAGAAGACGAAGAGGAATACGTCAAACCTGCTGT
CACTTGGAGCCGGAGCGGGCAAGAAATTTGTGCCTTGCGTTTAGACGGCG
TGGTTGTCTTTTTCCGGTTGCATTTCTTGGATAGCAGTCCTTTAATTAAT
GGGATTCCGTTGCCTGAATGGATGGACATGACGCCAGGGGGTGGTATGTC
CTCTGTGCTGGACGCGCCGCACGCTGTGGAAGTCTTGCCGTTACGGCGTC
TCGACCTAGGGAGAGGCAATCGAGCCACTTGCCTCTCTGCAGGGCTCTGG
TCACAGCATCTACTTTTGGGCAAGGGTCTGGAAATGGCCGTGTTGGACGT
GTCATGGAGTGGAAACGTTCAAAGAGAATACCAACTCAGCAGTAGCAGCA
ACAACAACAGCAGCAGCATCAGCAGAAATAACAGCGTCTCTAATTCACCG
AGCCCACCACCGATTCTCCTCCACATTTGCTACAGCGACACCTCCCATCT
GTTCGGCGCCATCTTATCTGATGGCCGAGCCGTTGTCTCCAACATCCCCA
GCAGCAGCTTCACTGTCAAGACTGTGCCCGTCCCATATAACCTCGTCCTC
TCTTCATCCCACCCCCACGAACAAGGACAAGACGCTTTCGATATCGCTGA
ATCAATGGCATTCAGCCCTGTAGACTCTGTCTTAGCAGTAGGATATGGCG
ATGGTTCCGTCTCGATTATTCGAGTCCTTTCCTCTAAAACGTACACCGAC
AGCCCTCGTCGTCCTCGCCCTTCCTCCAGCTCCTCCTCCAGCTCCTCCTC
CTCTTCCTCCTCCCCCTCTCCCTGCCAATTCGCACCCTCTTCATGGCAGC
CACTTTATCCAAGCGGGAATGCATCAGACATCACTCTCATTATTTCCCGT
CGACTGTCCCTCGCCTCGCTGGGATTTGAGATGCGGCATGTTGGCGCGGT
AATGACTCTGGGGTACAGTCCTGATGGCAGCTCATTGGCAGTAGCACATA
GCTGGTCTTGCTCGCTCAATGTCTGGGATACGTCGCAATGGTGTCGGCCC
ATGACCACTTTTCCGCGGGTGCCGCACACGCCTACCGCAGGTGGGAGGGG
AGAATGGACAGGAGGAGGGGCAGGAGCAGCAGGAGCAGCAGGGGGGGAGG
GAGGGCCGGTGTCAGTGATGGCAGCGGTTGCGTGTTTGTTGTGGACCCAG
CAGGGGTATCGGTTGTTGGTTGCGCACAATGAAGTGCGACAAGAAGATTT
GCTCTTTCAGGACCAAATCGAGGAAGGAAAACGGAGGGAAGGAAGGAGAT
GGAGAAGGTGTATCCTCCGAAGAGAACGCGCCAGTGCCAGCATCGTCCGC
TACGAAATGCTCAAGTGGGCTCGTCACGCCCCCCTCGCCGATACCCCCCT
TTGTCTTCAAGGGGTCAATACAATAGCCTTCATTGAACAACGGCCGTGGA
ATCCCCGCCTTCTTTGTTGGGCGCATGTCACCATTCCTCCCGCATACAGT
GTGAATGTCCCAGTCCAGCTCGTCGCCCAGTCCCCCTCCGGCGAGCACCT
CGCAGTAGCAGGCAAGGGAGGCCTCGCGCTCTACAATCGTCCCCAACGTC
GTTGGCGCCTATTTGGCAACGTGCACCAAGAAAGGGATTTGCATGTTGCT
GGGCTGACATGGTGGGGGGAAGAGGCTGTTGTAGTAGTAGCCAAGCAGCG
GGGAAGGACGACCTTCGAGATTCTTTTGTACCCAATGCACCACCTCGATA
ATGCCGCCCTCCTCTCAGAACCCGTCGCCCTCCCTCCCGGTACCCGACCC
CTTTTTCTTGAATGTGTTGAAGACAGACACGGCACTGCCTATCGGAGCCG
AAGTCAAAGGAGGGCCCCGAACAGCACCAGTGGCAAGAGCAGCAGGAGCA
GCAGGAGCAGCAGTGTGCCGTCATCTTTTAAAGACGAGCAAAGATGTGGG
ACGTCCTTGTCCGTCTCTGGGGCAAGTATTCATAGTAGTGGTAATGATAT
CAGCGGCAACGGGGGCTCCAAGCACGCGACCTCGACGTCGTTAGATGCGG
TGTATTGGATTCGGTCTGCAGTGTTGATGGTGGGAGATGCAAATTTCCTC
TTGTTCTATCGCCTAGTACGAGACCATAGCCCTAAAGGAGTCTCCGTGTC
ATTTATTCGTGACTTAAAAATACCACTCCATTCAGGCGGAGCAACAACTG
CTGCTCCTGCTCCTGCTACCGCTGCTGCTGCCACTGCTGTTACAACCTCC
CTTACTCCAGGCCCCGTCCAAGCCCTGGGCAGGGGCGAAACCCCCCGGCG
GATCATCCTCCTCCCCAACGTCAGCCCTCGAGCCGTGGCTGTCCTCTCCT
CCACGGGAAGTCTTTACCAAGTCGAAATCAAATCAGCCGTCACAACACTC
ATTGCCAAGGGCGTCAGTAGCTTGTGGGAGCTCGTTCTCCCCACAGAAGA
GAAAGCCATGCACCCCTGCTATGTTCTCTACTGTGGTGAACAGGGGTTTT
CCCTCTGGCTTCCCTCTCTTACCCTCAGCGAGCCCAAATCCCTCCTACTC
ACCCGAGAAGCCTGCCAGCTACCTTTCCTTGATCCTACCTTCAATCCCGA
CGTGGAAGGAGTGATAATGGGCATCCATGGCCCTACCTCCTCTCTTATTT
TCCTGACGCAGTCCTGCATTCAACCGCAAGCTTCGCTAAAGTATGCGGCC
TCGAATGGAGGGCCGCCTATTCCTCCACGTTTTGAAGTAGGTCTACAACG
GCGGCCAATTTATCAGATAGCATTTCGTTTTTTGTTGTTTTTGCAGAGTA
TGTTGTTAGAGAGAAAGGAGGGAGGAAGTAAAGCCGAGAGAAACGGGGGA
GGAGGAGAAGGGAAGATTGGGGGTTTCAAGGTATCTCTATCTGCGTCGTC
ATCGACGGAGGAATGCCGCAACAGCGACATGAGGAATGGCGTGGAGGCAA
AGTTGTCTTTTTCCAACAACACCGCTACCAGTGCTGCTGCTATTGCTGCT
GCTTCTACTGACACCCGCACCAGCAGCAATGCAGCAGCCAACGCAGTCGG
TGGTGTAGTGGCTGGTGTGTTTGATGAACTTTATTCTCAACCCGAGACTC
GTATCCAGCTTGCGGATGCTCTGGATTTTCTCCTTCGTTCGTGCATTGAA
GCACTGGCCAAGGCTCACCCGCGATCAAAGAAACAGGGTTTGGGACTATC
CTCCACCAGCACCACCAACCTTCGAATCGCTGAATTCACTGCAGGCATCT
CTTCTTATTTCACCTCTTTTTCGGCCAGCACGGAACAAGTCAAGGCCGCT
CTTGCCCTCTGTCGACGGGAGGCGGGGCTAGATTTATTTTATGAGGTCAT
CGTCCGAGTCGCGCGGAAAATTGAACCCTCTCGCCTCAAATACATTTTCC
CCTTACCTGATCTCGACGAACAAGGCTTTGGGGATACGCCGGTGACTTTA
TTTGAGAAATGCCTGGCAACAAAAAAGATGCATACGGCATTGCTTTACTT
ACCATTGATTGACCCCCCGGGGAGGGACGGAGGCAGGGGAGGAGGAGGGG
GGCTGCTTTTCCCATCGACTGATCGACGGGCGCGGCTGTTGGCGAACTGG
GAGGAAATGCAAGATTTGAAGTTGGTCCATGGATTGGCTTTACGTCTGCT
GTGGGAGGCGCTGAGGAGGGGGAAGAAGGAGTGGCAGATGCTGAAGCAAC
TGTGGCGGTTCATTCAGAAGAGAGAAGAGGCTCTGAAGCTGTATGACCAG
GAAGCGCGGTTTTTGAGCGAGGCTGGAGGGGGAGGGAGAGGATGCGAGGC
AGTAAATGGTTCGGAGGGAGGCAGTAGGTCACTGGTGGATTTGTTGTACC
GCGCGACTTTCGGGGTATTGGGCGCGCCGTCGGGGGCGGGTAGCGATGTA
GGAGGAGGTGGTGGCCAAAACGAGAAAGGTCTGTCGTCAGCGCCAGCCTC
GCGTGCAGGGAGTGTAAACCCGATTTCGCGTCCGCTGAATGAGTTTCTGG
AACATTTACCTGGGACGGTTGCTTCCGTTGGTGCCGCGAGGGGAGGAGGA
GGAGGAAGAGGGTATGGATGGATGTCTGAGCCAGATGCGCCTGAATCAAA
TCCTTCCTCTTCGTCTTCCTCGTCCTTGGCAGATTTCGACTTATTGCAAC
ACGCGGGATCGGGGACGGAAGTCTTGACCCTGTTTGCATCTATGTGCCTG
GCCACGCTTCGCTTGCGAGAGCTAGTTGACTCGTTGCTGCTCCTCGGTGG
AGGCGACCTCCGCCGGGTCCCCTTTCCCTCCCTCCAGCCCTGGATGAGCC
CGGGCACCACGAGCTTCAGCAGCAGTGCCAGTACCACTAACAGTACTGGC
AGCAGGAATGACGCCAGAAAGTGGCAACAGCACGCTTGGACATCCTCGCA
GTGGCCCTGGGCCCGCTTTGAGGCACCGTCGGAGGTTGTGTTGGATACCT
TCCTTGCGATCCGCGAGCAATTTGCCACTGCCTCCCCTTCCGGAGCAGCA
GCAGCAGCGACAGCTGCAACGACGGCTACTGAAGAAACAGGAAGGAGAAA
GAAGGCGTGTACGGTGGAGGAAAGGTTGTCGATTTTGGGTAGGATATGCG
TGGAGTTGAGAGATTATGAGTGTCTGTTGGCTGTGGGGACTTTCTCGAAG
GATGTGACGACGGTGACCGCGGCATTAAAGAGGAGCAAGTTGCGGATTGC
AGAGTATAGGACGATATTTTTGGACGAGGGGATGGAGGCGGGCGGCGTGG
CGGTAAAGGACTTTGTAGAGAAATCTACGACCCCCCTATTGGTGGTGGGG
ACGGTAGTGGGGCGGTCGTCGTGA

protein sequence of jgi.p|Nanoce1779_2|672269

>mRNA_6820-protein ID=mRNA_6820-protein|Name=jgi.p|Nanoce1779_2|672269|organism=Nannochloropsis oceanica|type=polypeptide|length=1686bp
MPGFTVGCPQRLAVRQGDSVRHTTSVLGMASDPTGQYFAILTRHDLQVWS
GGHHQLLLGWSTTNNNATAAASEGQSDTDEAGLQEDEEEYVKPAVTWSRS
GQEICALRLDGVVVFFRLHFLDSSPLINGIPLPEWMDMTPGGGMSSVLDA
PHAVEVLPLRRLDLGRGNRATCLSAGLWSQHLLLGKGLEMAVLDVSWSGN
VQREYQLSSSSNNNSSSISRNNSVSNSPSPPPILLHICYSDTSHLFGAIL
SDGRAVVSNIPSSSFTVKTVPVPYNLVLSSSHPHEQGQDAFDIAESMAFS
PVDSVLAVGYGDGSVSIIRVLSSKTYTDSPRRPRPSSSSSSSSSSSSSSP
SPCQFAPSSWQPLYPSGNASDITLIISRRLSLASLGFEMRHVGAVMTLGY
SPDGSSLAVAHSWSCSLNVWDTSQWCRPMTTFPRVPHTPTAGGRGEWTGG
GAGAAGAAGGEGGPVSVMAAVACLLWTQQGYRLLVAHNEVRQEDLLFQDQ
IEEGKRREGRRWRRCILRRERASASIVRYEMLKWARHAPLADTPLCLQGV
NTIAFIEQRPWNPRLLCWAHVTIPPAYSVNVPVQLVAQSPSGEHLAVAGK
GGLALYNRPQRRWRLFGNVHQERDLHVAGLTWWGEEAVVVVAKQRGRTTF
EILLYPMHHLDNAALLSEPVALPPGTRPLFLECVEDRHGTAYRSRSQRRA
PNSTSGKSSRSSRSSSVPSSFKDEQRCGTSLSVSGASIHSSGNDISGNGG
SKHATSTSLDAVYWIRSAVLMVGDANFLLFYRLVRDHSPKGVSVSFIRDL
KIPLHSGGATTAAPAPATAAAATAVTTSLTPGPVQALGRGETPRRIILLP
NVSPRAVAVLSSTGSLYQVEIKSAVTTLIAKGVSSLWELVLPTEEKAMHP
CYVLYCGEQGFSLWLPSLTLSEPKSLLLTREACQLPFLDPTFNPDVEGVI
MGIHGPTSSLIFLTQSCIQPQASLKYAASNGGPPIPPRFEVGLQRRPIYQ
IAFRFLLFLQSMLLERKEGGSKAERNGGGGEGKIGGFKVSLSASSSTEEC
RNSDMRNGVEAKLSFSNNTATSAAAIAAASTDTRTSSNAAANAVGGVVAG
VFDELYSQPETRIQLADALDFLLRSCIEALAKAHPRSKKQGLGLSSTSTT
NLRIAEFTAGISSYFTSFSASTEQVKAALALCRREAGLDLFYEVIVRVAR
KIEPSRLKYIFPLPDLDEQGFGDTPVTLFEKCLATKKMHTALLYLPLIDP
PGRDGGRGGGGGLLFPSTDRRARLLANWEEMQDLKLVHGLALRLLWEALR
RGKKEWQMLKQLWRFIQKREEALKLYDQEARFLSEAGGGGRGCEAVNGSE
GGSRSLVDLLYRATFGVLGAPSGAGSDVGGGGGQNEKGLSSAPASRAGSV
NPISRPLNEFLEHLPGTVASVGAARGGGGGRGYGWMSEPDAPESNPSSSS
SSSLADFDLLQHAGSGTEVLTLFASMCLATLRLRELVDSLLLLGGGDLRR
VPFPSLQPWMSPGTTSFSSSASTTNSTGSRNDARKWQQHAWTSSQWPWAR
FEAPSEVVLDTFLAIREQFATASPSGAAAAATAATTATEETGRRKKACTV
EERLSILGRICVELRDYECLLAVGTFSKDVTTVTAALKRSKLRIAEYRTI
FLDEGMEAGGVAVKDFVEKSTTPLLVVGTVVGRSS*

mRNA from alignment at scaffold_17:182451..187524+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6820 ID=mRNA_6820|Name=jgi.p|Nanoce1779_2|672269|organism=Nannochloropsis oceanica|type=mRNA|length=5074bp|location=Sequence derived from alignment at scaffold_17:182451..187524+ (Nannochloropsis oceanica)
ACAGCGTGACGACGCGATGCCGGGCTTCACGGTGGGTTGTCCGCAGCGGC
TGGCGGTGCGGCAGGGGGACAGCGTCCGGCACACGACCAGTGTCCTCGGC
ATGGCCTCCGATCCGACGGGACAGTACTTCGCCATCTTGACGCGGCACGA
CTTGCAAGTCTGGAGCGGGGGGCACCACCAACTGCTGCTTGGGTGGTCCA
CCACAAATAACAATGCAACGGCAGCTGCTTCAGAAGGCCAAAGTGACACC
GATGAGGCCGGTTTGCAAGAAGACGAAGAGGAATACGTCAAACCTGCTGT
CACTTGGAGCCGGAGCGGGCAAGAAATTTGTGCCTTGCGTTTAGACGGCG
TGGTTGTCTTTTTCCGGTTGCATTTCTTGGATAGCAGTCCTTTAATTAAT
GGGATTCCGTTGCCTGAATGGATGGACATGACGCCAGGGGGTGGTATGTC
CTCTGTGCTGGACGCGCCGCACGCTGTGGAAGTCTTGCCGTTACGGCGTC
TCGACCTAGGGAGAGGCAATCGAGCCACTTGCCTCTCTGCAGGGCTCTGG
TCACAGCATCTACTTTTGGGCAAGGGTCTGGAAATGGCCGTGTTGGACGT
GTCATGGAGTGGAAACGTTCAAAGAGAATACCAACTCAGCAGTAGCAGCA
ACAACAACAGCAGCAGCATCAGCAGAAATAACAGCGTCTCTAATTCACCG
AGCCCACCACCGATTCTCCTCCACATTTGCTACAGCGACACCTCCCATCT
GTTCGGCGCCATCTTATCTGATGGCCGAGCCGTTGTCTCCAACATCCCCA
GCAGCAGCTTCACTGTCAAGACTGTGCCCGTCCCATATAACCTCGTCCTC
TCTTCATCCCACCCCCACGAACAAGGACAAGACGCTTTCGATATCGCTGA
ATCAATGGCATTCAGCCCTGTAGACTCTGTCTTAGCAGTAGGATATGGCG
ATGGTTCCGTCTCGATTATTCGAGTCCTTTCCTCTAAAACGTACACCGAC
AGCCCTCGTCGTCCTCGCCCTTCCTCCAGCTCCTCCTCCAGCTCCTCCTC
CTCTTCCTCCTCCCCCTCTCCCTGCCAATTCGCACCCTCTTCATGGCAGC
CACTTTATCCAAGCGGGAATGCATCAGACATCACTCTCATTATTTCCCGT
CGACTGTCCCTCGCCTCGCTGGGATTTGAGATGCGGCATGTTGGCGCGGT
AATGACTCTGGGGTACAGTCCTGATGGCAGCTCATTGGCAGTAGCACATA
GCTGGTCTTGCTCGCTCAATGTCTGGGATACGTCGCAATGGTGTCGGCCC
ATGACCACTTTTCCGCGGGTGCCGCACACGCCTACCGCAGGTGGGAGGGG
AGAATGGACAGGAGGAGGGGCAGGAGCAGCAGGAGCAGCAGGGGGGGAGG
GAGGGCCGGTGTCAGTGATGGCAGCGGTTGCGTGTTTGTTGTGGACCCAG
CAGGGGTATCGGTTGTTGGTTGCGCACAATGAAGTGCGACAAGAAGATTT
GCTCTTTCAGGACCAAATCGAGGAAGGAAAACGGAGGGAAGGAAGGAGAT
GGAGAAGGTGTATCCTCCGAAGAGAACGCGCCAGTGCCAGCATCGTCCGC
TACGAAATGCTCAAGTGGGCTCGTCACGCCCCCCTCGCCGATACCCCCCT
TTGTCTTCAAGGGGTCAATACAATAGCCTTCATTGAACAACGGCCGTGGA
ATCCCCGCCTTCTTTGTTGGGCGCATGTCACCATTCCTCCCGCATACAGT
GTGAATGTCCCAGTCCAGCTCGTCGCCCAGTCCCCCTCCGGCGAGCACCT
CGCAGTAGCAGGCAAGGGAGGCCTCGCGCTCTACAATCGTCCCCAACGTC
GTTGGCGCCTATTTGGCAACGTGCACCAAGAAAGGGATTTGCATGTTGCT
GGGCTGACATGGTGGGGGGAAGAGGCTGTTGTAGTAGTAGCCAAGCAGCG
GGGAAGGACGACCTTCGAGATTCTTTTGTACCCAATGCACCACCTCGATA
ATGCCGCCCTCCTCTCAGAACCCGTCGCCCTCCCTCCCGGTACCCGACCC
CTTTTTCTTGAATGTGTTGAAGACAGACACGGCACTGCCTATCGGAGCCG
AAGTCAAAGGAGGGCCCCGAACAGCACCAGTGGCAAGAGCAGCAGGAGCA
GCAGGAGCAGCAGTGTGCCGTCATCTTTTAAAGACGAGCAAAGATGTGGG
ACGTCCTTGTCCGTCTCTGGGGCAAGTATTCATAGTAGTGGTAATGATAT
CAGCGGCAACGGGGGCTCCAAGCACGCGACCTCGACGTCGTTAGATGCGG
TGTATTGGATTCGGTCTGCAGTGTTGATGGTGGGAGATGCAAATTTCCTC
TTGTTCTATCGCCTAGTACGAGACCATAGCCCTAAAGGAGTCTCCGTGTC
ATTTATTCGTGACTTAAAAATACCACTCCATTCAGGCGGAGCAACAACTG
CTGCTCCTGCTCCTGCTACCGCTGCTGCTGCCACTGCTGTTACAACCTCC
CTTACTCCAGGCCCCGTCCAAGCCCTGGGCAGGGGCGAAACCCCCCGGCG
GATCATCCTCCTCCCCAACGTCAGCCCTCGAGCCGTGGCTGTCCTCTCCT
CCACGGGAAGTCTTTACCAAGTCGAAATCAAATCAGCCGTCACAACACTC
ATTGCCAAGGGCGTCAGTAGCTTGTGGGAGCTCGTTCTCCCCACAGAAGA
GAAAGCCATGCACCCCTGCTATGTTCTCTACTGTGGTGAACAGGGGTTTT
CCCTCTGGCTTCCCTCTCTTACCCTCAGCGAGCCCAAATCCCTCCTACTC
ACCCGAGAAGCCTGCCAGCTACCTTTCCTTGATCCTACCTTCAATCCCGA
CGTGGAAGGAGTGATAATGGGCATCCATGGCCCTACCTCCTCTCTTATTT
TCCTGACGCAGTCCTGCATTCAACCGCAAGCTTCGCTAAAGTATGCGGCC
TCGAATGGAGGGCCGCCTATTCCTCCACGTTTTGAAGTAGGTCTACAACG
GCGGCCAATTTATCAGATAGCATTTCGTTTTTTGTTGTTTTTGCAGAGTA
TGTTGTTAGAGAGAAAGGAGGGAGGAAGTAAAGCCGAGAGAAACGGGGGA
GGAGGAGAAGGGAAGATTGGGGGTTTCAAGGTATCTCTATCTGCGTCGTC
ATCGACGGAGGAATGCCGCAACAGCGACATGAGGAATGGCGTGGAGGCAA
AGTTGTCTTTTTCCAACAACACCGCTACCAGTGCTGCTGCTATTGCTGCT
GCTTCTACTGACACCCGCACCAGCAGCAATGCAGCAGCCAACGCAGTCGG
TGGTGTAGTGGCTGGTGTGTTTGATGAACTTTATTCTCAACCCGAGACTC
GTATCCAGCTTGCGGATGCTCTGGATTTTCTCCTTCGTTCGTGCATTGAA
GCACTGGCCAAGGCTCACCCGCGATCAAAGAAACAGGGTTTGGGACTATC
CTCCACCAGCACCACCAACCTTCGAATCGCTGAATTCACTGCAGGCATCT
CTTCTTATTTCACCTCTTTTTCGGCCAGCACGGAACAAGTCAAGGCCGCT
CTTGCCCTCTGTCGACGGGAGGCGGGGCTAGATTTATTTTATGAGGTCAT
CGTCCGAGTCGCGCGGAAAATTGAACCCTCTCGCCTCAAATACATTTTCC
CCTTACCTGATCTCGACGAACAAGGCTTTGGGGATACGCCGGTGACTTTA
TTTGAGAAATGCCTGGCAACAAAAAAGATGCATACGGCATTGCTTTACTT
ACCATTGATTGACCCCCCGGGGAGGGACGGAGGCAGGGGAGGAGGAGGGG
GGCTGCTTTTCCCATCGACTGATCGACGGGCGCGGCTGTTGGCGAACTGG
GAGGAAATGCAAGATTTGAAGTTGGTCCATGGATTGGCTTTACGTCTGCT
GTGGGAGGCGCTGAGGAGGGGGAAGAAGGAGTGGCAGATGCTGAAGCAAC
TGTGGCGGTTCATTCAGAAGAGAGAAGAGGCTCTGAAGCTGTATGACCAG
GAAGCGCGGTTTTTGAGCGAGGCTGGAGGGGGAGGGAGAGGATGCGAGGC
AGTAAATGGTTCGGAGGGAGGCAGTAGGTCACTGGTGGATTTGTTGTACC
GCGCGACTTTCGGGGTATTGGGCGCGCCGTCGGGGGCGGGTAGCGATGTA
GGAGGAGGTGGTGGCCAAAACGAGAAAGGTCTGTCGTCAGCGCCAGCCTC
GCGTGCAGGGAGTGTAAACCCGATTTCGCGTCCGCTGAATGAGTTTCTGG
AACATTTACCTGGGACGGTTGCTTCCGTTGGTGCCGCGAGGGGAGGAGGA
GGAGGAAGAGGGTATGGATGGATGTCTGAGCCAGATGCGCCTGAATCAAA
TCCTTCCTCTTCGTCTTCCTCGTCCTTGGCAGATTTCGACTTATTGCAAC
ACGCGGGATCGGGGACGGAAGTCTTGACCCTGTTTGCATCTATGTGCCTG
GCCACGCTTCGCTTGCGAGAGCTAGTTGACTCGTTGCTGCTCCTCGGTGG
AGGCGACCTCCGCCGGGTCCCCTTTCCCTCCCTCCAGCCCTGGATGAGCC
CGGGCACCACGAGCTTCAGCAGCAGTGCCAGTACCACTAACAGTACTGGC
AGCAGGAATGACGCCAGAAAGTGGCAACAGCACGCTTGGACATCCTCGCA
GTGGCCCTGGGCCCGCTTTGAGGCACCGTCGGAGGTTGTGTTGGATACCT
TCCTTGCGATCCGCGAGCAATTTGCCACTGCCTCCCCTTCCGGAGCAGCA
GCAGCAGCGACAGCTGCAACGACGGCTACTGAAGAAACAGGAAGGAGAAA
GAAGGCGTGTACGGTGGAGGAAAGGTTGTCGATTTTGGGTAGGATATGCG
TGGAGTTGAGAGATTATGAGTGTCTGTTGGCTGTGGGGACTTTCTCGAAG
GATGTGACGACGGTGACCGCGGCATTAAAGAGGAGCAAGTTGCGGATTGC
AGAGTATAGGACGATATTTTTGGACGAGGGGATGGAGGCGGGCGGCGTGG
CGGTAAAGGACTTTGTAGAGAAATCTACGACCCCCCTATTGGTGGTGGGG
ACGGTAGTGGGGCGGTCGTCGTGA

Coding sequence (CDS) from alignment at scaffold_17:182451..187524+

>mRNA_6820 ID=mRNA_6820|Name=jgi.p|Nanoce1779_2|672269|organism=Nannochloropsis oceanica|type=CDS|length=5058bp|location=Sequence derived from alignment at scaffold_17:182451..187524+ (Nannochloropsis oceanica)
ATGCCGGGCTTCACGGTGGGTTGTCCGCAGCGGCTGGCGGTGCGGCAGGG
GGACAGCGTCCGGCACACGACCAGTGTCCTCGGCATGGCCTCCGATCCGA
CGGGACAGTACTTCGCCATCTTGACGCGGCACGACTTGCAAGTCTGGAGC
GGGGGGCACCACCAACTGCTGCTTGGGTGGTCCACCACAAATAACAATGC
AACGGCAGCTGCTTCAGAAGGCCAAAGTGACACCGATGAGGCCGGTTTGC
AAGAAGACGAAGAGGAATACGTCAAACCTGCTGTCACTTGGAGCCGGAGC
GGGCAAGAAATTTGTGCCTTGCGTTTAGACGGCGTGGTTGTCTTTTTCCG
GTTGCATTTCTTGGATAGCAGTCCTTTAATTAATGGGATTCCGTTGCCTG
AATGGATGGACATGACGCCAGGGGGTGGTATGTCCTCTGTGCTGGACGCG
CCGCACGCTGTGGAAGTCTTGCCGTTACGGCGTCTCGACCTAGGGAGAGG
CAATCGAGCCACTTGCCTCTCTGCAGGGCTCTGGTCACAGCATCTACTTT
TGGGCAAGGGTCTGGAAATGGCCGTGTTGGACGTGTCATGGAGTGGAAAC
GTTCAAAGAGAATACCAACTCAGCAGTAGCAGCAACAACAACAGCAGCAG
CATCAGCAGAAATAACAGCGTCTCTAATTCACCGAGCCCACCACCGATTC
TCCTCCACATTTGCTACAGCGACACCTCCCATCTGTTCGGCGCCATCTTA
TCTGATGGCCGAGCCGTTGTCTCCAACATCCCCAGCAGCAGCTTCACTGT
CAAGACTGTGCCCGTCCCATATAACCTCGTCCTCTCTTCATCCCACCCCC
ACGAACAAGGACAAGACGCTTTCGATATCGCTGAATCAATGGCATTCAGC
CCTGTAGACTCTGTCTTAGCAGTAGGATATGGCGATGGTTCCGTCTCGAT
TATTCGAGTCCTTTCCTCTAAAACGTACACCGACAGCCCTCGTCGTCCTC
GCCCTTCCTCCAGCTCCTCCTCCAGCTCCTCCTCCTCTTCCTCCTCCCCC
TCTCCCTGCCAATTCGCACCCTCTTCATGGCAGCCACTTTATCCAAGCGG
GAATGCATCAGACATCACTCTCATTATTTCCCGTCGACTGTCCCTCGCCT
CGCTGGGATTTGAGATGCGGCATGTTGGCGCGGTAATGACTCTGGGGTAC
AGTCCTGATGGCAGCTCATTGGCAGTAGCACATAGCTGGTCTTGCTCGCT
CAATGTCTGGGATACGTCGCAATGGTGTCGGCCCATGACCACTTTTCCGC
GGGTGCCGCACACGCCTACCGCAGGTGGGAGGGGAGAATGGACAGGAGGA
GGGGCAGGAGCAGCAGGAGCAGCAGGGGGGGAGGGAGGGCCGGTGTCAGT
GATGGCAGCGGTTGCGTGTTTGTTGTGGACCCAGCAGGGGTATCGGTTGT
TGGTTGCGCACAATGAAGTGCGACAAGAAGATTTGCTCTTTCAGGACCAA
ATCGAGGAAGGAAAACGGAGGGAAGGAAGGAGATGGAGAAGGTGTATCCT
CCGAAGAGAACGCGCCAGTGCCAGCATCGTCCGCTACGAAATGCTCAAGT
GGGCTCGTCACGCCCCCCTCGCCGATACCCCCCTTTGTCTTCAAGGGGTC
AATACAATAGCCTTCATTGAACAACGGCCGTGGAATCCCCGCCTTCTTTG
TTGGGCGCATGTCACCATTCCTCCCGCATACAGTGTGAATGTCCCAGTCC
AGCTCGTCGCCCAGTCCCCCTCCGGCGAGCACCTCGCAGTAGCAGGCAAG
GGAGGCCTCGCGCTCTACAATCGTCCCCAACGTCGTTGGCGCCTATTTGG
CAACGTGCACCAAGAAAGGGATTTGCATGTTGCTGGGCTGACATGGTGGG
GGGAAGAGGCTGTTGTAGTAGTAGCCAAGCAGCGGGGAAGGACGACCTTC
GAGATTCTTTTGTACCCAATGCACCACCTCGATAATGCCGCCCTCCTCTC
AGAACCCGTCGCCCTCCCTCCCGGTACCCGACCCCTTTTTCTTGAATGTG
TTGAAGACAGACACGGCACTGCCTATCGGAGCCGAAGTCAAAGGAGGGCC
CCGAACAGCACCAGTGGCAAGAGCAGCAGGAGCAGCAGGAGCAGCAGTGT
GCCGTCATCTTTTAAAGACGAGCAAAGATGTGGGACGTCCTTGTCCGTCT
CTGGGGCAAGTATTCATAGTAGTGGTAATGATATCAGCGGCAACGGGGGC
TCCAAGCACGCGACCTCGACGTCGTTAGATGCGGTGTATTGGATTCGGTC
TGCAGTGTTGATGGTGGGAGATGCAAATTTCCTCTTGTTCTATCGCCTAG
TACGAGACCATAGCCCTAAAGGAGTCTCCGTGTCATTTATTCGTGACTTA
AAAATACCACTCCATTCAGGCGGAGCAACAACTGCTGCTCCTGCTCCTGC
TACCGCTGCTGCTGCCACTGCTGTTACAACCTCCCTTACTCCAGGCCCCG
TCCAAGCCCTGGGCAGGGGCGAAACCCCCCGGCGGATCATCCTCCTCCCC
AACGTCAGCCCTCGAGCCGTGGCTGTCCTCTCCTCCACGGGAAGTCTTTA
CCAAGTCGAAATCAAATCAGCCGTCACAACACTCATTGCCAAGGGCGTCA
GTAGCTTGTGGGAGCTCGTTCTCCCCACAGAAGAGAAAGCCATGCACCCC
TGCTATGTTCTCTACTGTGGTGAACAGGGGTTTTCCCTCTGGCTTCCCTC
TCTTACCCTCAGCGAGCCCAAATCCCTCCTACTCACCCGAGAAGCCTGCC
AGCTACCTTTCCTTGATCCTACCTTCAATCCCGACGTGGAAGGAGTGATA
ATGGGCATCCATGGCCCTACCTCCTCTCTTATTTTCCTGACGCAGTCCTG
CATTCAACCGCAAGCTTCGCTAAAGTATGCGGCCTCGAATGGAGGGCCGC
CTATTCCTCCACGTTTTGAAGTAGGTCTACAACGGCGGCCAATTTATCAG
ATAGCATTTCGTTTTTTGTTGTTTTTGCAGAGTATGTTGTTAGAGAGAAA
GGAGGGAGGAAGTAAAGCCGAGAGAAACGGGGGAGGAGGAGAAGGGAAGA
TTGGGGGTTTCAAGGTATCTCTATCTGCGTCGTCATCGACGGAGGAATGC
CGCAACAGCGACATGAGGAATGGCGTGGAGGCAAAGTTGTCTTTTTCCAA
CAACACCGCTACCAGTGCTGCTGCTATTGCTGCTGCTTCTACTGACACCC
GCACCAGCAGCAATGCAGCAGCCAACGCAGTCGGTGGTGTAGTGGCTGGT
GTGTTTGATGAACTTTATTCTCAACCCGAGACTCGTATCCAGCTTGCGGA
TGCTCTGGATTTTCTCCTTCGTTCGTGCATTGAAGCACTGGCCAAGGCTC
ACCCGCGATCAAAGAAACAGGGTTTGGGACTATCCTCCACCAGCACCACC
AACCTTCGAATCGCTGAATTCACTGCAGGCATCTCTTCTTATTTCACCTC
TTTTTCGGCCAGCACGGAACAAGTCAAGGCCGCTCTTGCCCTCTGTCGAC
GGGAGGCGGGGCTAGATTTATTTTATGAGGTCATCGTCCGAGTCGCGCGG
AAAATTGAACCCTCTCGCCTCAAATACATTTTCCCCTTACCTGATCTCGA
CGAACAAGGCTTTGGGGATACGCCGGTGACTTTATTTGAGAAATGCCTGG
CAACAAAAAAGATGCATACGGCATTGCTTTACTTACCATTGATTGACCCC
CCGGGGAGGGACGGAGGCAGGGGAGGAGGAGGGGGGCTGCTTTTCCCATC
GACTGATCGACGGGCGCGGCTGTTGGCGAACTGGGAGGAAATGCAAGATT
TGAAGTTGGTCCATGGATTGGCTTTACGTCTGCTGTGGGAGGCGCTGAGG
AGGGGGAAGAAGGAGTGGCAGATGCTGAAGCAACTGTGGCGGTTCATTCA
GAAGAGAGAAGAGGCTCTGAAGCTGTATGACCAGGAAGCGCGGTTTTTGA
GCGAGGCTGGAGGGGGAGGGAGAGGATGCGAGGCAGTAAATGGTTCGGAG
GGAGGCAGTAGGTCACTGGTGGATTTGTTGTACCGCGCGACTTTCGGGGT
ATTGGGCGCGCCGTCGGGGGCGGGTAGCGATGTAGGAGGAGGTGGTGGCC
AAAACGAGAAAGGTCTGTCGTCAGCGCCAGCCTCGCGTGCAGGGAGTGTA
AACCCGATTTCGCGTCCGCTGAATGAGTTTCTGGAACATTTACCTGGGAC
GGTTGCTTCCGTTGGTGCCGCGAGGGGAGGAGGAGGAGGAAGAGGGTATG
GATGGATGTCTGAGCCAGATGCGCCTGAATCAAATCCTTCCTCTTCGTCT
TCCTCGTCCTTGGCAGATTTCGACTTATTGCAACACGCGGGATCGGGGAC
GGAAGTCTTGACCCTGTTTGCATCTATGTGCCTGGCCACGCTTCGCTTGC
GAGAGCTAGTTGACTCGTTGCTGCTCCTCGGTGGAGGCGACCTCCGCCGG
GTCCCCTTTCCCTCCCTCCAGCCCTGGATGAGCCCGGGCACCACGAGCTT
CAGCAGCAGTGCCAGTACCACTAACAGTACTGGCAGCAGGAATGACGCCA
GAAAGTGGCAACAGCACGCTTGGACATCCTCGCAGTGGCCCTGGGCCCGC
TTTGAGGCACCGTCGGAGGTTGTGTTGGATACCTTCCTTGCGATCCGCGA
GCAATTTGCCACTGCCTCCCCTTCCGGAGCAGCAGCAGCAGCGACAGCTG
CAACGACGGCTACTGAAGAAACAGGAAGGAGAAAGAAGGCGTGTACGGTG
GAGGAAAGGTTGTCGATTTTGGGTAGGATATGCGTGGAGTTGAGAGATTA
TGAGTGTCTGTTGGCTGTGGGGACTTTCTCGAAGGATGTGACGACGGTGA
CCGCGGCATTAAAGAGGAGCAAGTTGCGGATTGCAGAGTATAGGACGATA
TTTTTGGACGAGGGGATGGAGGCGGGCGGCGTGGCGGTAAAGGACTTTGT
AGAGAAATCTACGACCCCCCTATTGGTGGTGGGGACGGTAGTGGGGCGGT
CGTCGTGA

Synonyms

Publications