jgi.p|Nanoce1779_2|593628, gene_6061 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|593628
Unique Namegene_6061
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:434492..437046 +

Link to JBrowse

Properties
Property NameValue
TranscriptId593714
ProteinId593628
Product nameWD40-repeat-containing domain protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:434492..437046 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01790NO16G01790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593628mRNA_6061-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593628mRNA_6061Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|593628

>mRNA_6061-protein ID=mRNA_6061-protein|Name=jgi.p|Nanoce1779_2|593628|organism=Nannochloropsis oceanica|type=polypeptide|length=682bp
MVHPLTSPKRLHEFVAHTVQVNAVTIAPSHRLVATGGDDNVVNVWRVDNA
SNIASLAGHTSPVMCLTIDPASERFVAAGSEGGGIKVFDMASGKLVRSLT
GHAAGVTCLNYDAAAGMLISGSLDASFKIWDVRTKKCVMHHKGHSTDVTD
AQFSPDGRWCCSSGKDGVMNLWDLRDRETIYSFELETKQGKPSPILHFNF
HPALPMLATSTGDRSLRLFHTDNFKLLASSSFPGETSPASAMAFDGHGHL
CTATTNRLRVLKGDTLEVMGDAGAGAIDAPWGNKVAMLSCHDGQLLAMGV
RHNVVSLYTTQMDSPAAAETAVPAAAGSTARAALAAMEEETPLPQDMAFT
PSRITRSVTRRASLLSPPPALSADTGAVSASVAISAVAPAEEIGGGRLAP
SQHPSKKCAASTVSSTSNNKSKQHQHDKENQSSTSTSNTISSTTTSSSRQ
AAGAPGGAKTSSTTTLTSQKKEEKVPLDPQARLSRADDEIIAGTMLHRKV
LMGALSARLTHLQRLRDLWKKGRVKETFLLLYRLHEATPEDQGRLTVLAD
FLRAIDLIECAKECGPVTLEVSTPLLPVLASLLALDFEGHVLAGLKTMTS
LLVLCGGDVREILRAPVGAGVDLSREERVEKCRVFHLAMQEAQERVQKLG
GKEGGRVFKRSSPVHMAVEKAQRELTGFLNA*
back to top
Synonyms
Publications