jgi.p|Nanoce1779_2|274293, gene_9171 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|274293
Unique Namegene_9171
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_36:127310..130145 +

Link to JBrowse

Properties
Property NameValue
TranscriptId274379
ProteinId274293
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:127310..130145 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL054ncniL054Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G00690NO28G00690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|274293mRNA_9171-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|274293mRNA_9171Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|274293

>mRNA_9171-protein ID=mRNA_9171-protein|Name=jgi.p|Nanoce1779_2|274293|organism=Nannochloropsis oceanica|type=polypeptide|length=756bp
MSAAAFSSPPSSLPPTSRERQSPRPTRPPPLHRLLLRVTCVELGSSGSGN
HDDHSLNDFEHDEPPPLPPPPPTSRSSTPPSTPRSSSWSSRTSSAFSQQH
QQHRRQRTSSRERQGGDQRVRDVVALKETTASAVVRGLVEGEMPCVSNEV
VARYALVMMYPIREEDGSLTHILRTLRGEEKPLEVVEKALEEAEGGMGDK
DEDEGEWEREERVCDIALDGEQSIRASESVPAPSSPTVSLGTNRKDSTAR
TLPTPKAKAKVECKGAFTRTQLLDEGLLFWLLKDLRGPPLEFEGYVSGAE
TSDDEVPSSSSFLSPSSSFPPSSDVVGPVFYSGYLLKQSSRDPCLWRRRW
CVLGENKIWYTKVKHREGRAGGWEGGRAGGGRRGKVAFLSLVGLQVLESS
RSSSSSSSSSYSVLTTGAGAEAGGAAGAAAVVPFGIELHTAHGVQVFRAA
ERREQAGWVDAIRRRVVLSEENEWMAMAELVVGEEERARGRRYERCVEQV
WKEGGRGEVKDEDEEENEGSEDLVGGKDGKEEMDFEEDSPAKGAQARKKG
SSSSSSSSSSSPDSRSISKSRRQARIRRLLCGGGGKMREGGRGLGEKLAF
VLAVQDYRELCRLESDPLLAPPERKWAVAQAVYDEFLRGAGGKGGREEEV
AGVLEEHAARLRARREGRGARGGMDGGGKGPGTSKPLDVPRLLRRQGKGS
LSSSSPPPPSDLKEIDGSTGPLPCPPKELFDDVILSWGGAQLNDRKKGGT
KGTLG*
back to top
Synonyms
Publications