jgi.p|Nanoce1779_2|547470, gene_9852 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|547470
Unique Namegene_9852
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_45:49140..51320 +

Link to JBrowse

Properties
Property NameValue
TranscriptId547556
ProteinId547470
Product nameLung seven transmembrane receptor-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_45supercontigscaffold_45:49140..51320 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL065ncniL065Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G01240NO28G01240Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|547470mRNA_9852-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|547470mRNA_9852Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|547470

>mRNA_9852-protein ID=mRNA_9852-protein|Name=jgi.p|Nanoce1779_2|547470|organism=Nannochloropsis oceanica|type=polypeptide|length=531bp
MQPLPSILCPLLLLLTIAFLPLVSYAFKYQINDKYAETAKWSFTETYMYG
SGKGPLAWKDGDASVHLNLSLRISTYADEEYVNVSVLFYHEEDRSKSIGG
SASSEEGETAENEAGGAIFVPDADLCSLEFPPEASDRSLHTFAAHKVDEV
SGEGQEWEALVHADYKVLQSGVQNVLFQVCPSLMSLSSVALAGEISFKNP
YGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGV
LVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRAL
LLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGG
SGGRTEKGGDGSNRMLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETY
KLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEV
LNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSEEGREGGGGDEEGIEFSIG
SQFSITDEDEDEDEGGNGDLRVERRDARFS*
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Synonyms
Publications