NO28G01240, NO28G01240 (gene) Nannochloropsis oceanica

Overview
NameNO28G01240
Unique NameNO28G01240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2917
Alignment locationchr28:385292..388208 +

Link to JBrowse

Properties
Property NameValue
DescriptionGpr7 transmembrane protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:385292..388208 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR009637TM_rcpt_euk
Homology
BLAST of NO28G01240 vs. NCBI_GenBank
Match: EWM20871.1 (gpr7 transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 477.6 bits (1228), Expect = 4.900e-131
Identity = 236/328 (71.95%), Postives = 275/328 (83.84%), Query Frame = 0
Query:   21 PLVSYAFKYQINDKYAETAKWSFTETYMYGSGKGPLAWKDGDASVHLNLSLRISTYADEEYVNVSVLFYHEEDRSKSIGGSASSEEGETAENEAGGAIFVPDADLCSLEFPPEASDRSLHTFAAHKVDEVSGEG---QEWEALVHADYKVLQSGVQNVLFQVCPSLMSLSSVALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEA 346
            PLV ++FKYQI+++YAETAKWS+TETYMYGSG+GPLAW +GDASVHLNLSLR+ST  +E+YVNVSVLFYH+++         +               +VPD+DLC+LEFPP ASDR++HT  AHKV+   GEG    EW A V ADYKVL+SGVQNVLFQ+CP L+S+S V LAGE+SF+NPYG+LPGRFYGYLPFEGARFFAFL FF++YLG+V KHR HLLRLHYAIL VLV+ATAE+LSWFLAFSHMN++GTPYCCPFPAVV+SAMVFEL+QKT SRALLLLICLGYGIARPSL KGEW SL TL+LLYLGAT+LDEASEI EA
Sbjct:   16 PLVVHSFKYQIDERYAETAKWSYTETYMYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKE---------AGXXXXXXXXXXXXXXYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPLVSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASEIAEA 334          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: CBJ28368.1 (G-protein coupled receptor [Ectocarpus siliculosus])

HSP 1 Score: 292.0 bits (746), Expect = 3.800e-75
Identity = 184/494 (37.25%), Postives = 280/494 (56.68%), Query Frame = 0
Query:   26 AFKYQINDKYAETAKWSFTETYMYGSGKGPLAWKDGDASVHLNLSLRISTYADEE--YVNVSVLFYHEEDRSKSIGGSASSEEGETAENEAGGAIFVPDADLCSLEF-PPEA-SDRSLHTFAAHKVDEVSGE----GQEWEALVHADYKVLQSGVQNVLFQVCPSLMSLSSVALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNRMLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSR-IGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSEEGREGGGGDE-EGIEF--SIGSQFSITD 508
            +FKY ++D   E A+ S++E +MYGS  GP+    G + +H +L +      +      N+S++FY        +                       + ++C     PP A +D  + +F A +  +   E    GQ + A V A  ++ +SG+Q+   QVCP+ +    +  AG + F+NPYGYLPG  YG LPFE  R  A +A  + +   ++ HR  +L +H  I+GV+V++T EA +W+ A+S++N+ G PYCCP+P VV+ AM+ E++++T SR +LL+ICLGYGI R  L++ E  S+  LT+ +  + I+  AS +G A  + GSGG  E     +   L + PALL D+VFL+WIY  L  M+K L++ NETYK +++  L+ T+  FVTLF  LT+ +L +       W W   W   V+WE+LNF +LAAV  +WRPSP S  LA +KQL T+E G E   G E + +EF  + G QF+I D
Sbjct:   23 SFKYSLDDTVYEQARTSYSEGWMYGSNTGPMGATHGSSYIHTDLQVTAIPLREPSSGEFNISIMFYRSTVLDYGV---------------------YENLNICDERVSPPSAFTDVEVISFPAVRNADYGAEDGALGQAYTADVLAHREITESGLQHAFIQVCPTDVGAEVLNTAGSLDFRNPYGYLPGADYGCLPFEVFRVVASMALGIGFGYAMLAHRASILPVHKMIIGVIVLSTLEASTWWGAYSYVNATGRPYCCPYPGVVVLAMLMEVVRRTTSRFMLLMICLGYGITRVQLERREMISVCALTVAFFASGIVQLASSVGSASNV-GSGGEYE-----TYNPLLAVPALLFDMVFLTWIYGQLSNMLKELKDLNETYKYKMFRGLAWTLGTFVTLFTTLTVAMLAAEGSQTQSWEWKFEWINVVSWEILNFCMLAAVSIIWRPSPRSALLAYSKQLATTEVGAEEADGIEMDTVEFQGAPGGQFTIGD 489          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: XP_009040031.1 (expressed protein [Aureococcus anophagefferens] >EGB05386.1 expressed protein [Aureococcus anophagefferens])

HSP 1 Score: 259.6 bits (662), Expect = 2.100e-65
Identity = 173/459 (37.69%), Postives = 253/459 (55.12%), Query Frame = 0
Query:   14 LLTIAFLPLVSYAFKYQINDKYAETAKWSFTETYMYGSGKGPLAWKDGDASVHLNLSLRISTYADEEYVNVSVLFYHEEDRSKSIGGSASSEEGETAENEAGGAIFVPDADLCSLEFPPEASDRSLHTFAAHKVDEVSGEGQEWEALVHADYKVLQSGVQNVLFQVCPSLMSLSSVALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNRMLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFL 473
            L+ +A+L  V+ ++K+ I+D Y +  K SF+E Y YG+  GP     G + V ++L  ++S        NV+VL              A +  GE    E GG       +LC+ E P      +  +FA   VD VS         +   Y+V  SG+Q V  QVC S   +  + L G I+FKNPYG+LP  ++G+LPFE  R  +F  F   +  ++V HR  LL LHYAI    ++A AEA +WF ++  MN+ G P CCPFP+ VI+AM  E +++T +RALLL++ LG+G+ R SL   E   +  L L YL ++I+   +++ E+  +  SG +     D         P L  D+ FL WIYM+LV  M  L++  +TYKL +YT+L+ TI  FV L   LT V+  SR+  F WPW L W +TV+ E+LNFAV+AAV  +W+P+  +Q L
Sbjct:    5 LVAVAWLGAVA-SYKWDISDTYGQ-EKLSFSELYQYGTDDGPFPVTRGASYVLVDLEGQLSN--PYSSANVTVL--------------AFTSPGEL---ELGG------VNLCARELPAGVETSARRSFA---VDAVSSR------KIRLYYEVPTSGLQYVALQVCDSWAPV-LLRLEGTITFKNPYGFLPAMYFGFLPFELVRVASFACFLAYFFALLVIHRDKLLPLHYAIFAAALLAAAEAGAWFFSYLSMNASGAPLCCPFPSHVIAAMTLEFLRRTLTRALLLVVSLGHGVVRASLTTREALGVALLLLGYLVSSIVATVTKVEESSDL-HSGSKASTTSD--------LPVLFFDLCFLVWIYMALVGTMDALKDDKQTYKLAMYTKLAYTIGAFVGLVSVLTAVIFASRLELFDWPWQLYWLQTVSLEILNFAVIAAVTVIWKPTEHAQLL 417          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: XP_012206838.1 (hypothetical protein SPRG_12731 [Saprolegnia parasitica CBS 223.65] >KDO22450.1 hypothetical protein SPRG_12731 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 205.7 bits (522), Expect = 3.600e-49
Identity = 137/437 (31.35%), Postives = 223/437 (51.03%), Query Frame = 0
Query:   48 MYGSGKGPLAWKDGDASVHLNLS-LRISTYADEEYVNVSVLFYHEEDRSKSIGGSASSEEGETAENEAGGAIFVPDADLCSLEFPPEASDRSLHTFAAHKVDEVSGEGQEWEALVHADYKVLQSG-VQNVLFQVCPSLMSLSSVALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNRMLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSE 483
            M+GS  GPL  + G +SVHLN+S +  S+  +   +   V+F+++ D   ++           A+ E   A+F      CS +   E +   +H     +   V+G       +    YK+  SG + +++F    +  S ++V   G ++ +NPYG LP  FYG LPF G     +L     +  ++  HRK  + L   I  VL++ T  +  WF+A   MN  G P+  P P + I+A+  +   +T +R +LL++CLGYGI + +L + +   +  ++L Y G  + D+      A +  G  GR+          +W+   L C++VF+ WIY+SL T++K LR   +  KL++Y  L+ ++  FV  F  LT V +  R+G F WP    W + VAW VLNF V AA+C +WR  PT++ +A A QLP  +
Sbjct:   53 MFGSNHGPLFAEHGSSSVHLNISGVNASSAMNGGRL---VVFHYQADNLNAL-----------ADAEGNLALFA-----CS-QLQSELTMAGMHHLERREFPIVNG-----SVVASTTYKINSSGWIDSLVFVCSETHASQAAVPFTGTLTVRNPYGLLPAVFYGLLPFSGFLSLGYLVLAFFFAILLCLHRKEAIALQVGIFAVLLLGTVSSAIWFIALYEMNQVGQPFSWPLPPLYIAAVACDAGMRTFARMILLVVCLGYGIVKDTLPRLDKVLIVVMSLAYFGTGVADDLIREATADRSSGLRGRSPS--------IWALLQLACNLVFVLWIYLSLETILKDLRSAKQFAKLKMYEALAYSLGGFVLFFTMLTAVAVSGRVGLFEWPTEWEWTQLVAWPVLNFIVSAAMCVIWR--PTARSIAYASQLPMED 454          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: XP_008611567.1 (hypothetical protein SDRG_07508 [Saprolegnia diclina VS20] >EQC35283.1 hypothetical protein SDRG_07508 [Saprolegnia diclina VS20])

HSP 1 Score: 200.7 bits (509), Expect = 1.200e-47
Identity = 137/437 (31.35%), Postives = 223/437 (51.03%), Query Frame = 0
Query:   48 MYGSGKGPLAWKDGDASVHLNLS-LRISTYADEEYVNVSVLFYHEEDRSKSIGGSASSEEGETAENEAGGAIFVPDADLCSLEFPPEASDRSLHTFAAHKVDEVSGEGQEWEALVHADYKVLQSG-VQNVLFQVCPSLMSLSSVALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNRMLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSE 483
            M+GS  GPL  + G +SVHLN+S + +S+  +   +   V+F+++ D   ++           A+ E   A+F      CS +   E +   +H F   +   V+        +   +YKV  SG + +++F       S  +V   G ++ +NPYG LP  FYG LPF G     +L     +  ++  HRK  + L   I  VLV+ T  +  WF+A   MN  G P+  P P + ++A+  +   +T +R +LL++CLGYGI + +L + +   +  ++L Y G  + D+      A +  G  GR+          +W+   L C++VF+ WIY+SL T++K LR   +  KL++Y  L+ ++  FV  F  LT V + +R+G F W     W + VAW VLNF V AA+C +WR  PT++ +A A QLP  +
Sbjct:   54 MFGSNHGPLFAEHGASSVHLNISGVNVSSAMNGWRL---VVFHYQADNLNAL-----------ADAEGNLALFA-----CS-QLQSELAMAGMHHFERREFPIVNR-----SVIASTNYKVNSSGWIDSLVFVCSDQHASQDAVQFTGTLTVRNPYGLLPAVFYGLLPFSGFLSLGYLVLAFFFAILLCIHRKEAIALQVGIFAVLVLGTVSSAIWFVALYEMNEVGQPFSWPLPPLYVAAVACDAGMRTFARMILLVVCLGYGIVKDTLPRLDKVLIVVMSLAYFGTGVADDLIREATADRSRGLRGRSPS--------IWALLQLACNLVFVLWIYLSLETILKDLRSAKQFAKLQMYEALAYSLGGFVLFFTLLTGVAVSARVGLFEWRTEWEWTQLVAWPVLNFIVSAAMCVIWR--PTARSIAFASQLPMED 455          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: POM68060.1 (Transmembrane protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 200.7 bits (509), Expect = 1.200e-47
Identity = 113/321 (35.20%), Postives = 173/321 (53.89%), Query Frame = 0
Query:  188 SVALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNR-MLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSEEGREGGGGDEEGIEFSIGSQFSITD 508
            ++   G +  +NPYG LP   YG LPF G     +L   + ++ ++++HR+ LL LH+ IL +LV+ TA +  WF AF  MN  G P CCP+P   + A++ +   +T +R +LL++CLGYGI R  L + E   +  L+L Y  + I DE +              T  G D   +   WSF  LLC++ F+ WI  S+  +++ LR+Q +  KL +Y  L+ ++  F+  F  LT+V + SR+G F W     W + VAW VLNF V AA+ F+WRP+  S   A + QLP +         D  G+E +  +  S +D
Sbjct:  160 TLTFTGSMEVRNPYGLLPAVLYGMLPFSGFLTIGYLILDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWFYAFYRMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEVSVIAFLSLAYFVSGIADEVTR------------GTSSGADFREKPTAWSFIQLLCNLAFIMWIQYSMERILRDLRDQKQFAKLSMYRWLAWSLAAFIVFFTLLTVVAVCSRLGVFEWDVEWEWMQLVAWPVLNFTVSAAMTFIWRPTQNSSQFAYSMQLPMT---------DSPGLEMTRNTHGSSSD 459          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: POM73176.1 (Transmembrane protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 199.5 bits (506), Expect = 2.600e-47
Identity = 112/321 (34.89%), Postives = 173/321 (53.89%), Query Frame = 0
Query:  188 SVALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNR-MLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSEEGREGGGGDEEGIEFSIGSQFSITD 508
            ++   G +  +NPYG LP   YG LPF G     +L   + ++ ++++HR+ LL LH+ IL +LV+ TA +  WF +F  MN  G P CCP+P   + A++ +   +T +R +LL++CLGYGI R  L + E   +  L+L Y  + I DE +              T  G D   +   WSF  LLC++ F+ WI  S+  +++ LR+Q +  KL +Y  L+ ++  F+  F  LT+V + SR+G F W     W + VAW VLNF V AA+ F+WRP+  S   A + QLP +         D  G+E +  +  S +D
Sbjct:  160 TLTFTGSMEVRNPYGLLPAVLYGMLPFSGFLTIGYLILDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWFYSFYRMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEVSVIAFLSLAYFVSGIADEVTR------------GTSSGADFREKPTAWSFIQLLCNLAFIMWIQYSMERILRDLRDQKQFAKLSMYRWLAWSLAAFIVFFTLLTVVAVCSRLGVFEWDVEWEWMQLVAWPVLNFTVSAAMTFIWRPTQNSSQFAYSMQLPMT---------DSPGLEMTRNTHGSSSD 459          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: CCA21426.1 (Gpr7 transmembrane protein putative [Albugo laibachii Nc14])

HSP 1 Score: 198.7 bits (504), Expect = 4.400e-47
Identity = 146/473 (30.87%), Postives = 229/473 (48.41%), Query Frame = 0
Query:   19 FLPLVSYAFKYQINDKYAETAKWSFTETYMYGSGKGPLAWKDGDASVHLNLSLRISTYADEEYVNVSVLFYHEEDRSKSIGGSASSEEGETAENEAGGAIFVPDADLCSLE-FPPEASDRSLHTFAAHKVDEVSGEGQEWEALVHADYKVLQSGVQNVLFQVCPSLMSLSS--------VALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNRMLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSE 483
            FL LV+ A  Y I+ K A    +   E  ++GS KGPL  + G++++ + L     T  D    +++ + YH       +      E          G    P   +  +E +    SD  +   A ++V E      +       + KV  S   N       + +S+ +         A  G +  +NPYG LP   YG LPF G     +L  +  +  ++VKHR  L+RLHY I  +L++     + WFLA   MNS G P CCP+P  +++A++F  + +T +RA+L+++CLGYGI R  L   E  S+  L+L+Y    I DE S        G S G   +    +    WSF  L+C++ F+ WI++S+  +M  L EQ +  K ++Y  L+  +  F+  F  LT++ + SR+G F W     W + VAW VL+F V A++C +WRP+  S  LA + QLP  E
Sbjct:   14 FLTLVAKASIYPISSK-AWIPSYQHAEK-VFGSNKGPLFARTGNSTLKVTLKGDKIT-NDLHRWSLTTVIYHLNSYDSFVRVQLYME-----RFACSGEKSFPYGGISKIERYVSPLSDEIVQGTAEYQVKESGWIVTQIFICPTNNTKVSNSADSNTT-NNSDNTLSIDTNDAYITPVYAYTGTLEIRNPYGLLPAPIYGMLPFSGFLALGYLGLYAFFALLMVKHRSQLIRLHYGIFVILLLGALANVIWFLALYSMNSTGDPVCCPYPTKLLTAVIFNTLMRTLARAILVVVCLGYGIVRERLSLCEVASVSILSLVYFLCGIGDEVSR-------GTSSGIEFRHPPTA----WSFAQLICNLAFIIWIHLSMERIMTDLNEQKQFAKFKMYRSLAWALASFIIFFSILTVIAVSSRVGIFEWSIEWEWTQLVAWPVLDFVVSASMCSIWRPTKNSSNLAYSMQLPQME 466          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: XP_008905491.1 (hypothetical protein PPTG_11007 [Phytophthora parasitica INRA-310] >ETN08930.1 hypothetical protein PPTG_11007 [Phytophthora parasitica INRA-310])

HSP 1 Score: 198.4 bits (503), Expect = 5.700e-47
Identity = 133/439 (30.30%), Postives = 217/439 (49.43%), Query Frame = 0
Query:   48 MYGSGKGPLAWKDGDASVHLNLSLRISTYADEEYVNVSVLFYHEEDRSKSIGGSASSEEGETAENEAGGAIFVPDADLCSLEFPPEAS-DRSLHTFAAHKVDEVSGEGQEWEALVHADYKVLQSGVQNVLFQVC--PSLMSLSSVALAGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNR-MLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSE 483
            ++ + +GP+  + G++SV +++S  ++   +     + V FYH ++              E  E  AG    +  +D+  ++F   +   R + T A      VS          +  + V  SG  +    VC      +  ++   G +  +NPYG LP   YG LPF G     +L   + ++ ++++HR+ LL LH+ IL +LV+ TA +  WF AF  MN  G P CCP+P   + A++ +   +T +R +LL++CLGYGI R  L + E   +  L+L Y  + I DE +              T  G D   +   WSF  LLC++ F+ WI  S+  +++ LR+Q +  KL +Y  L+ ++  F+     LT+V + SR+G F W     W + VAW VLNF V AA+  +WRP+  S   A + QLP +E
Sbjct:   41 LFATDQGPILARTGNSSVTIDIS-GVNVTQEMAGWRLVVFFYHVDNY-------------EDFETVAGKIELLACSDVEGMKFDGMSDVQRFVFTVANETTPTVS---------ANVSHLVNSSGWTDTQIFVCAEDEGAATETLTFTGSMEVRNPYGLLPAVLYGMLPFSGFLTVGYLVLDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWFYAFYKMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEVGVITFLSLAYFISGIADEVTR------------GTSSGADFREKPTAWSFIQLLCNLAFIMWIQFSMERILRDLRDQKQFAKLSMYRWLAWSLAAFIVXXTVLTVVAVCSRLGVFEWDVEWEWMQLVAWPVLNFIVSAAMTLIWRPTQNSSQFAYSMQLPMTE 444          
BLAST of NO28G01240 vs. NCBI_GenBank
Match: XP_009828609.1 (hypothetical protein H257_05429 [Aphanomyces astaci] >ETV81872.1 hypothetical protein H257_05429 [Aphanomyces astaci])

HSP 1 Score: 197.2 bits (500), Expect = 1.300e-46
Identity = 122/335 (36.42%), Postives = 184/335 (54.93%), Query Frame = 0
Query:  155 QEWEALVHA-----DYKVLQSGVQNVLFQVCPSLMSLSSVAL--AGEISFKNPYGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGVLVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRALLLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGGSGGRTEKGGDGSNRMLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETYKLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEVLNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSE 483
            +E+E   H+      YKVL SG  + +  VC    S +  AL   G ++  NPYG LP  FYG LPF G     +LA  + +  +++ +R+ L+RL Y I  VL +  A +  WF+AF+ MNS+G P+  P P + I+A+VF++  +T +RALLL++CLGYGI R  L   + + +  L+L Y G  + D+    G             +    +   +WSF  LLC++ F+ WIY++L T++K L+ Q +  K  +Y  L+  +  FV  F  LTLV +  R G F W     W + VAW +LNF V  A+C++WRP+  S   A + QLP +E
Sbjct:  120 EEFEVFNHSLIATTSYKVLLSGWVDTVVAVCTKEGSRAEDALDFTGTLTVLNPYGLLPAVFYGLLPFSGFLALGYLALALFFGLLLLCYRRTLIRLQYGIFSVLGLGVASSSIWFMAFAQMNSEGQPFRWPLPPLYITAVVFDVGMRTIARALLLVVCLGYGIVRNFLPPIQKWLIVFLSLAYFGTGVGDDLWRDGSLDH--------PQTAHRTRPSVWSFLQLLCNLSFVLWIYVALETILKELQVQKQWAKFAMYKSLAWALASFVVFFSLLTLVSVCGRFGVFEWKIEWEWMQLVAWPLLNFIVSLAMCWIWRPTARSSQFAFSTQLPVTE 446          
The following BLAST results are available for this feature:
BLAST of NO28G01240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20871.14.900e-13171.95gpr7 transmembrane protein [Nannochloropsis gadita... [more]
CBJ28368.13.800e-7537.25G-protein coupled receptor [Ectocarpus siliculosus... [more]
XP_009040031.12.100e-6537.69expressed protein [Aureococcus anophagefferens] >E... [more]
XP_012206838.13.600e-4931.35hypothetical protein SPRG_12731 [Saprolegnia paras... [more]
XP_008611567.11.200e-4731.35hypothetical protein SDRG_07508 [Saprolegnia dicli... [more]
POM68060.11.200e-4735.20Transmembrane protein [Phytophthora palmivora var.... [more]
POM73176.12.600e-4734.89Transmembrane protein [Phytophthora palmivora var.... [more]
CCA21426.14.400e-4730.87Gpr7 transmembrane protein putative [Albugo laibac... [more]
XP_008905491.15.700e-4730.30hypothetical protein PPTG_11007 [Phytophthora para... [more]
XP_009828609.11.300e-4636.42hypothetical protein H257_05429 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR065ncniR065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01240.1NO28G01240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|547470gene_9852Nannochloropsis oceanica (N. oceanica CCMP1779)gene
GCR3gene9548Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01240.1NO28G01240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01240 ID=NO28G01240|Name=NO28G01240|organism=Nannochloropsis oceanica|type=gene|length=2917bp
GGGGGGAAGAAGAGGTCAGCGGGGAGGTTACAAATAGCTTGGAGTAGGGA
GGAGCTGAAAGTGTCCCATTAACGAAGCAAGCAAGCAATCAGGGGCAACA
GCTGCTGAACGTGTGGTATGAGGGGACTGCAATTGGGAGAAGGGGGCGGG
GGAAGCCGGCAGGAGGGGGCGAGCAAGGAAGCAACACGCATTACTGGAGA
CGGTGCTGGGTGTTTTCGTGTGGAAGAACGAAATGACCACCGGAAGACGA
GAGTGTGGAAATGGGAGAAAAGAAAAAAAAATCGATTAGGACACTCTGTC
TCCCGATGGGTGGTCTGATCGAGGAGGGGATCGAGCGCCTGGCCAACATC
GGGGAATCGATGCGATGGATGCCCCACATGATTTACAGAGTCGGCTCCTG
TTCAACCGGGGATCCATGAGGGTGAGGAGCAGTCTCGTTATTGATGCTTT
GCCTGCCGTTGTATGTGCTCGCTGTTACATCGCTGATCATCATCACTCGC
ATTAACTGTTTTCTTCTCCCGTGGTCCCCCCCCTCCTTGTTTGTTAGTGC
CTAGCCATGTATAATGGCCACGCCCACTGGAGCCACATATAACTCACTGG
CCTTCTGTTATTATCCTCGACGTGCCGTGCGGCCGAGCCGTTTATTCGCG
CTCTGTCGCTATTCGCCTCCATCCAAGGCCTTACGTCTCCCCACTCGAAC
TTTCACCGCATCTACACTTACCACACGCAAAAATACTCAGGCACTTTAAG
CTGGACCTCCTCGTGATAGCAACAGCAGTCCAAGAAGTAGCGGGGGAAAC
TTGCTGCTCTACTCTCCCGTCCTGCCCTCTCTTTTTTCCATTCCCACCGG
CATCATCATCGTCATGCAGCCTCTCCCCTCCATTCTCTGTCCCCTCCTCC
TGCTCCTCACTATTGCCTTCCTCCCCCTTGTCAGCTACGCCTTCAAGTAT
CAAATCAATGATAAATATGCCGAAACGGCCAAGTGGTCTTTCACCGAGAC
GTACATGTACGGGTCTGGCAAGGGGCCCCTCGCCTGGAAAGATGGGgtaa
ataagtacaaccttcggtcccttcatccctccctccatccctatttcatg
cttcttctttttccatcccttccctcttattcactatcgcttttaagacc
attatgatggcaccgatatggcatccgactctcaacgcgatctcttacat
ccccgcccttcatcgatccatccctcccatccctcgcatcagGACGCCTC
CGTGCATCTGAATCTCTCCCTCCGGATCTCCACTTACGCCGACGAAGAGT
ACGTCAATGTGTCTGTCCTCTTTTACCACGAAGAAGACAGAAGCAAAAGC
ATAGGTGGCAGCGCCAGCAGCGAGGAAGGGGAGACTGCCGAGAACGAGGC
AGGGGGAGCCATCTTCGTTCCTGATGCTGATTTGTGTTCTCTTGAGTTTC
CTCCGGAAGCCTCCGACCGTTCGCTCCACACGTTTGCCGCACACAAAGTC
GATGAAGTGAGTGGGGAGGGTCAGGAATGGGAGGCGCTGGTGCATGCTGA
CTATAAGGTCTTGCAGAGTGGGGTCCAAAATGTGTTGTTCCAAGTGTGTC
CCTCCCTAATGTCCTTGTCCTCGGTGGCATTGGCTGGGGAGATCAGTTTC
AAGAATCCTTATGGGTACTTACCTGGAAGGTTCTACGGTTATCTGCCTTT
TGAGGGTGCGCGCTTTTTTGCGTTTTTGGCCTTTTTTATGCTTTACCTTG
GGATGGTTGTTAAGCATCGCAAGCATTTGTTGCGATTGCATTACGCGATT
CTCGGGGTGTTGGTTGTGGCGACGGCGGAAGCATTGTCATGGTTTCTGGC
ATTTTCGCACATGAACTCGCAAGGAACGCCGTACTGTTGTCCATTTCCGG
CGGTCGTGATAAGCGCGATGGTCTTCGAGTTAATTCAGAAAACAGCGTCA
CGCGCTCTTTTGTTACTGATTTGTTTGGGGTACGGCATTGCGCGGCCGAG
TTTGCAGAAGGGGGAATGGTTCAGTCTTGGGACTTTGACATTGTTGTATT
TGGGTGCGACCATACTGGACGAAGCGAGCGAGATCGGCGAGGCCCAACAG
ATTGGAGGTAGCGGGGGACGGACGGAGAAAGGTGGGGATGGGAGTAACAG
GATGTTATGGTCGTTTCCAGCGTTGCTGTGTGACATTGTATTCCTTTCCT
GGATCTACATGAGCCTGGTGACGATGATGAAGATTCTGCGGGAGCAGAAC
GAGACGTACAAGCTCGAGTTGTACACCCGCCTGTCTTCGACAATCCTCTT
GTTTGTCACCCTCTTTGGATGTCTTACGCTTGTGGTGCTCTTGTCGCGCA
TTGGCTTTTTTGTATGGCCGTGGACGCTGCTCTGGGCCGAGACTGTTGCC
TGGGAAGTCCTGAATTTCGCGGTCCTAGCTGCGGTTTGTTTCTTATGGCG
CCCATCACCCACTAGTCAATTTTTGGCACAAGCGAAGCAGCTACCGACGT
CTGAGGAAGGAAGGGAAGGAGGAGGGGGGGATGAGGAAGGGATTGAGTTC
TCGATCGGTAGTCAGTTTAGTATCACTGATGAGGACGAGGACGAGGATGA
GGGAGGGAACGGCGACCTAAGAGTAGAAAGGAGAGATGCTAGATTCTCAT
GAAAGGAAAAATATGAAGGGAGGTAATGAGGTTATACGTGTATGATGTTT
TTAAGTGTTAATGACAAAAGGGGAAGGGCGAGGTGGAAAATTACAAAGTT
GGGCGATGGAGGAACGAAGATTTAGGTAGGATGATGGGGAGAAACGTTCA
AGATAATTAAGAGACACAGGGGCCTCTCTCCCGTTTCGACGGCGATAAAG
CCGACGCAGTAGGACCCCGTCATAAAATAATTAGAAAGAAAGAATCAAAG
TCAGTGTCTAACTGGGG
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protein sequence of NO28G01240.1

>NO28G01240.1-protein ID=NO28G01240.1-protein|Name=NO28G01240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=531bp
MQPLPSILCPLLLLLTIAFLPLVSYAFKYQINDKYAETAKWSFTETYMYG
SGKGPLAWKDGDASVHLNLSLRISTYADEEYVNVSVLFYHEEDRSKSIGG
SASSEEGETAENEAGGAIFVPDADLCSLEFPPEASDRSLHTFAAHKVDEV
SGEGQEWEALVHADYKVLQSGVQNVLFQVCPSLMSLSSVALAGEISFKNP
YGYLPGRFYGYLPFEGARFFAFLAFFMLYLGMVVKHRKHLLRLHYAILGV
LVVATAEALSWFLAFSHMNSQGTPYCCPFPAVVISAMVFELIQKTASRAL
LLLICLGYGIARPSLQKGEWFSLGTLTLLYLGATILDEASEIGEAQQIGG
SGGRTEKGGDGSNRMLWSFPALLCDIVFLSWIYMSLVTMMKILREQNETY
KLELYTRLSSTILLFVTLFGCLTLVVLLSRIGFFVWPWTLLWAETVAWEV
LNFAVLAAVCFLWRPSPTSQFLAQAKQLPTSEEGREGGGGDEEGIEFSIG
SQFSITDEDEDEDEGGNGDLRVERRDARFS*
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Synonyms
Publications