jgi.p|Nanoce1779_2|341564, gene_10214 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|341564
Unique Namegene_10214
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_50:28967..33116 +

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Properties
Property NameValue
TranscriptId341650
ProteinId341564
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:28967..33116 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0016879ligase activity, forming carbon-nitrogen bonds
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL073ncniL073Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G01020NO30G01020Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|341564mRNA_10214-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|341564mRNA_10214Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|341564

>mRNA_10214-protein ID=mRNA_10214-protein|Name=jgi.p|Nanoce1779_2|341564|organism=Nannochloropsis oceanica|type=polypeptide|length=698bp
MKREGPTEGGTEEGKEGGEEGGTARSYPSQGQTDGIALGLAREMQSRGWL
SHLHLSVPEHVFALMPLRHSPTVGSLQEVLCHIDSRETAEEQAKNLLHKF
RKTTMRKLQELSDKAPEDSDILERPPLPLPLLPSLLPSLLRHPVAQAMKA
YLQRQGEGGREGGREGGREGGREAVCVSLSGGVDSMVIAKLLWVFRAEIG
YKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTA
RDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAG
PLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWS
TRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKK
VKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILLL
HLYQQQHQQHQKHRQQQQQQPPEGRRVRLFIFRPGVIRYWDQRKEATEAA
KVEERRAREEEGREVVVAGWGIRTVPALRKREDGKEGRTEEGREGRTEGN
NDKSQLNYNNAPSHCKDRVDEEEELEGEKGEEGEGDDAALLHLATHGSFT
HPLVLPPCPKCQGPTLMGFYQHERRKGNGGYRELGRFVQALPLKVKRSLP
LVTPYCPRCEGGPAAPTAAPASATAAIAATVLPAAARSVQVSYRYLG*
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Synonyms
Publications