NO30G01020, NO30G01020 (gene) Nannochloropsis oceanica

Overview
NameNO30G01020
Unique NameNO30G01020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5542
Alignment locationchr30:373963..379504 +

Link to JBrowse

Properties
Property NameValue
DescriptiontRNA(Ile)-lysidine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:373963..379504 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016879ligase activity, forming carbon-nitrogen bonds
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR010323DUF924
IPR011063tRNA-lysidine/thiocyt_synth
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO30G01020 vs. NCBI_GenBank
Match: GAX27959.1 (hypothetical protein FisN_32Lh019 [Fistulifera solaris])

HSP 1 Score: 239.2 bits (609), Expect = 3.500e-59
Identity = 123/246 (50.00%), Postives = 158/246 (64.23%), Query Frame = 0
Query:  114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360
            +V +H+DY NR ES+ EA YV+++C +  + +        +TR  TARD YE+ AREIRY  YR  + E     +LLGHH+GD+ ENVLSN  +G GPL LSGM   +   GV + RPLL L+K  I+D+AH FGVPYFKDTTP WSTRGKLR +L PLL ++YGEG   +LS LA ESD  RAL Y L  QPF  +     + +       ++ Q LFFW+ VLRE++HS G GM SDK +   L
Sbjct:  306 LVAVHIDYANRRESSAEAQYVQRYCDQLGIVYRCRRI-DEVTRGITARDEYERIAREIRYQAYRDAIAEFDGIGILLGHHKGDLRENVLSNAHKGCGPLDLSGMTAVSQNDGVTLLRPLLPLEKSTIFDYAHQFGVPYFKDTTPHWSTRGKLRNRLMPLLEEVYGEGSMNNLSALAVESDECRALFYQLALQPFLDQTTYKPMGLQFATAPWKE-QGLFFWKFVLREVLHSAGLGMFSDKSVVSFL 549          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: GAX20637.1 (hypothetical protein FisN_32Hh019 [Fistulifera solaris])

HSP 1 Score: 238.4 bits (607), Expect = 6.000e-59
Identity = 123/246 (50.00%), Postives = 158/246 (64.23%), Query Frame = 0
Query:  114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360
            +V +H+DY NRPES+ EA YV+ +C +  + +        +TR  TARD YE+ AREIRY  YR  + E     +LLGHH+GD+ ENVLSN  +G GPL LSGM   +   GV + RPLL L+K  I+D+AH FGVPYFKDTTP WSTRGKLR +L PLL ++YGEG   +LS LA ESD  RAL + L  QPF  +     + +       ++ Q LFFW+ VLRE++HS G GM SDK +   L
Sbjct:  340 LVAVHIDYANRPESSAEAQYVQHYCDQLGIVYRCRRI-DEVTRGITARDEYERIAREIRYQAYRDAIEEFDGIGILLGHHKGDLRENVLSNAHKGCGPLDLSGMTAVSQNDGVTLLRPLLPLEKIAIFDYAHQFGVPYFKDTTPHWSTRGKLRNRLVPLLEEVYGEGSMNNLSALAVESDECRALFHQLALQPFLDQTTYKPMGLQFATAPWKE-QGLFFWKFVLREVLHSAGLGMFSDKSVVSFL 583          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: EJK48013.1 (hypothetical protein THAOC_33226 [Thalassiosira oceanica])

HSP 1 Score: 237.3 bits (604), Expect = 1.300e-58
Identity = 134/306 (43.79%), Postives = 176/306 (57.52%), Query Frame = 0
Query:  114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGAR-------AVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILLLHLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWLQLRKDYAVLL 413
            +V IH+DY NRPES  EAAYVE++ ++  ++F        +TR  TARD YE+ AREIR+  YR    E  +         ++LGHHRGD+ ENVLSN  RG GPL LSGM E ++  GV + RPLL L+K  IYD++HT+GVPYFKDTTP WSTRGKLR +L PLL ++YGEG   +LS LA ESD  R L+ + +  PF  +V K  +          + +SLFFW+ VLR+++H+ G+GM SDK ++  L  +                                      WLQ RKDYAV L
Sbjct:  508 IVAIHIDYANRPESGAEAAYVERFSEKLGIQFTLRKI-DEITRGVTARDDYERIAREIRFDIYRRTCAEVSSDGTVQRGVGIMLGHHRGDLRENVLSNAHRGCGPLDLSGMTEVSTNDGVVLFRPLLFLEKSFIYDYSHTYGVPYFKDTTPHWSTRGKLRNRLLPLLEEIYGEGSMNNLSTLATESDDARELIGETVVTPFMSQVNKHPMGF-TFETAPWKGRSLFFWKFVLRQVLHNSGRGMFSDKSVSSFLERIRVGTIKEG------------------------------WLQCRKDYAVYL 781          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: CBN75006.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 235.3 bits (599), Expect = 5.100e-58
Identity = 129/272 (47.43%), Postives = 161/272 (59.19%), Query Frame = 0
Query:  114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTET--------------------------GARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360
            VV IH+DYGNR ES REA +V+ WC  H + F+K      + R  TARD YEK AREIR+  Y+  L                             G  AV+ GHH GDVEENVL+N ++G   L L+GM    +V GV V RP+L   K  +YDFAH FGVPYFKDTTPSWSTRGKLRRQL P++ D++G G   HLS +ARESD LR LV+  +FQP W K     + + + V E  +   L FW+EVLR+LVH  G  M+ DK L + +
Sbjct:   18 VVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI-GEVRRGVTARDEYEKVAREIRFDAYKAALGGRSKDGXXXXXXXXXXXXXXEEKGEGGGGRPAVMFGHHEGDVEENVLTNLIKGCSILELAGMSPENTVNGVRVWRPMLPFGKDVVYDFAHKFGVPYFKDTTPSWSTRGKLRRQLIPMMEDVFGSGVLGHLSAVARESDDLRDLVHRELFQPVWDKAVTQPLGLRLDV-ESYRSHGLLFWKEVLRQLVHKMGMPMVRDKTLGMFV 287          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: CCI41336.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 234.2 bits (596), Expect = 1.100e-57
Identity = 115/251 (45.82%), Postives = 159/251 (63.35%), Query Frame = 0
Query:  111 YKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSR-GQGMLSDKGLAILLL 361
            Y  +V IH+DY NRPESA E  YV++WC    ++F+       +TR  T RD YEK AR+IRY+TYR IL + G   +  GHHRGDV+EN++SN ++G+  L+L+GM ET+   GV + RP+L   K  I+DFAH +G+PYFKDTTP+WSTRGKLR QL PLL DMYG+GF  ++S L  ES     L+ + I +P    V    VA+          Q  F W+E+LR++ H + G  M+ +K +  L++
Sbjct:  249 YYGIVAIHIDYANRPESAAEHTYVKEWCDRLDIQFYARRI-DEVTRGETKRDEYEKVARDIRYSTYRDILKKHGIPGICFGHHRGDVQENIISNMMKGSSLLNLNGMSETSVANGVVIWRPMLQFDKSAIFDFAHRYGIPYFKDTTPAWSTRGKLRNQLMPLLKDMYGDGFLQNVSNLGTESTQCSELIQENIMRPIMSSVHSSSVAVWFSC-TLLANQPYFIWKEILRQICHFKMGDHMIREKPIRELMI 497          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: CCA21772.1 (tRNA(Ile)lysidine synthase putative [Albugo laibachii Nc14])

HSP 1 Score: 233.0 bits (593), Expect = 2.500e-57
Identity = 116/250 (46.40%), Postives = 158/250 (63.20%), Query Frame = 0
Query:  111 YKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSR-GQGMLSDKGLAILL 360
            Y  +V IH+DYGNRPESA E +YV+ WC    ++F+       +TR  T RD YEK AR+IRY+TYR IL +     +  GHHRGDV+ENV+SN ++G   L L+GM ET++  GV + RP+L   K  I+DFAH +G+PYFKDTTP+WSTRGKLR QL PLL DMYG+G+  ++S L  ES     L+ + I  P    V+   VA+       E  Q  F W+E+LR++ H + G  M+ +K +  L+
Sbjct:  250 YYGIVAIHIDYGNRPESAAECSYVKYWCDRLDIQFYARRI-DEVTRGETKRDEYEKIARDIRYSTYRSILEKHSIPGICFGHHRGDVQENVVSNMMKGLSLLSLNGMSETSTANGVVIWRPMLEFDKSTIFDFAHRYGIPYFKDTTPAWSTRGKLRNQLMPLLRDMYGDGYLHNISNLGAESIQCNDLMQENIMTPIMSSVQSSSVAVWFSCSLLE-NQPFFIWKEILRQICHFKLGGHMIREKPIRELM 497          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: XP_002290025.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93562.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 231.9 bits (590), Expect = 5.600e-57
Identity = 135/308 (43.83%), Postives = 172/308 (55.84%), Query Frame = 0
Query:  114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTET---GAR------AVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILLLHLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWLQLRKDYAVLL 413
            ++CIH+DY NRPES  EAAYV ++C +   +F        +TR   ARD YE+ AREIR+  YR    E    G +       V+LGHHRGD+ ENV+SN  +G GPL LSGM   +   GV + RPLL L+K  I+D+AHTFGVPYFKDTTP+WSTRGKLR +L PLL ++YGEG   +LS LA ESD  RAL+   +  PF +KVK   + + V      +   LFFW+ VLR ++H  G+GM SDK +   L  +                                      WLQ RKDYAV L
Sbjct:  567 IICIHIDYANRPESGAEAAYVGRYCHQIGAQFVCRKI-DEVTRGVNARDDYERIAREIRFGLYRQYCGEARRIGGQESDIGIGVMLGHHRGDLRENVISNAHKGCGPLDLSGMTSVSKNDGVTLFRPLLPLEKTFIFDYAHTFGVPYFKDTTPNWSTRGKLRNRLLPLLEEIYGEGSMDNLSSLAEESDDARALIQQTVMGPFMEKVKYSTMGI-VFETIPWKDCGLFFWKFVLRNVLHGAGRGMFSDKSVESFLDRIASTKLKEG------------------------------WLQCRKDYAVYL 842          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: XP_002902233.1 (tRNA(Ile)-lysidine synthase, putative [Phytophthora infestans T30-4] >EEY56905.1 tRNA(Ile)-lysidine synthase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 229.2 bits (583), Expect = 3.700e-56
Identity = 119/250 (47.60%), Postives = 158/250 (63.20%), Query Frame = 0
Query:  114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHS-RGQGMLSDKGLAILLLHL 363
            +V +HLDYGNRPES  E  YV +WC+   + FH       + R +T RD YEK +REIRY+TY  ++ +     +  GHHRGDV+ENV+SN ++G   L+L+GM+ ++ V GV + RPLL L+K  I++FAH +GVPYFKDTTP WSTRGKLR  L PLL DMYG+GF  +LS L  ES     LV   +  P  K V +  VA+ V  G  +  QS F W+EV R++ HS  G  M+ +K L  L+  L
Sbjct:  256 IVAVHLDYGNRPESGAECDYVRRWCERFGIVFHVRRI-DEVKRATTRRDDYEKISREIRYSTYAEVMQKYHIPGMCFGHHRGDVQENVISNMMKGLSLLNLNGMQASSVVNGVRIWRPLLDLEKDVIFEFAHRYGVPYFKDTTPKWSTRGKLRNHLVPLLRDMYGDGFLNNLSALGAESTQCAELVDSRVLAPIMKTVGQSDVAVWVDCGLLKD-QSFFVWKEVFRQICHSIMGNSMVREKPLHELIQKL 503          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: XP_022838476.1 (tRNA(Ile)-lysidine/2-thiocytidine synthase [Ostreococcus tauri] >CEF97082.1 tRNA(Ile)-lysidine/2-thiocytidine synthase [Ostreococcus tauri])

HSP 1 Score: 228.8 bits (582), Expect = 4.800e-56
Identity = 111/247 (44.94%), Postives = 162/247 (65.59%), Query Frame = 0
Query:  113 NVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360
            +VV +H+DY NRPES  EA +V+ W   H ++F + T   ++ R  T R++YE E+R+IRY  Y+    + G  AVLLGHH GDV+EN+++N +RGA  L ++GM++   V GV + RP+L   K  + DFAHT+GVPYF D+TP+WSTRGKLR QL PLL DM+G+GF  ++S++   SD L  +V + +F+PFW   K   V  +V        Q +FFW++V+RE+ H  G  ML ++ + +LL
Sbjct:  279 DVVTLHIDYKNRPESTEEADFVDDWSVRHGMKFERCTV-DAIRRGVTPREQYEIESRKIRYGFYKKSGQKHGFPAVLLGHHHGDVQENIITNLMRGANLLSVNGMDKRGVVEGVRIWRPMLPHNKVDVLDFAHTYGVPYFLDSTPTWSTRGKLRNQLVPLLEDMFGDGFMRNVSMIGENSDQLSEMVDNALFKPFWNDRKMSDVGCYVDC-TPYISQPIFFWKQVIREMCHGLGASMLKERSVRLLL 523          
BLAST of NO30G01020 vs. NCBI_GenBank
Match: OUS43805.1 (hypothetical protein BE221DRAFT_78622 [Ostreococcus tauri])

HSP 1 Score: 228.4 bits (581), Expect = 6.200e-56
Identity = 111/247 (44.94%), Postives = 162/247 (65.59%), Query Frame = 0
Query:  113 NVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360
            +VV +H+DY NRPES  EA +V+ W   H ++F + T   ++ R  T R++YE E+R+IRY  Y+    + G  AVLLGHH GDV+EN+++N +RGA  L ++GM++   V GV + RP+L   K  + DFAHT+GVPYF D+TP+WSTRGKLR QL PLL DM+G+GF  ++S++   SD L  +V + +F+PFW   K   V  +V        Q +FFW++V+RE+ H  G  ML ++ + +LL
Sbjct:  886 DVVTLHIDYKNRPESTEEADFVDDWSVRHGMKFERCTV-GAIRRGVTPREQYEIESRKIRYGFYKKSGQKHGFPAVLLGHHHGDVQENIITNLMRGANLLSVNGMDKRGVVEGVRIWRPMLPHNKVDVLDFAHTYGVPYFLDSTPTWSTRGKLRNQLVPLLEDMFGDGFMRNVSMIGENSDQLSEMVDNALFKPFWNDRKMSDVGCYVDC-TPYISQPIFFWKQVIREMCHGLGASMLKERSVRLLL 1130          
The following BLAST results are available for this feature:
BLAST of NO30G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX27959.13.500e-5950.00hypothetical protein FisN_32Lh019 [Fistulifera sol... [more]
GAX20637.16.000e-5950.00hypothetical protein FisN_32Hh019 [Fistulifera sol... [more]
EJK48013.11.300e-5843.79hypothetical protein THAOC_33226 [Thalassiosira oc... [more]
CBN75006.15.100e-5847.43conserved unknown protein [Ectocarpus siliculosus][more]
CCI41336.11.100e-5745.82unnamed protein product [Albugo candida][more]
CCA21772.12.500e-5746.40tRNA(Ile)lysidine synthase putative [Albugo laibac... [more]
XP_002290025.15.600e-5743.83predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002902233.13.700e-5647.60tRNA(Ile)-lysidine synthase, putative [Phytophthor... [more]
XP_022838476.14.800e-5644.94tRNA(Ile)-lysidine/2-thiocytidine synthase [Ostreo... [more]
OUS43805.16.200e-5644.94hypothetical protein BE221DRAFT_78622 [Ostreococcu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR073ncniR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR098ngnoR098Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR097ngnoR097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G01020.1NO30G01020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G01020.2NO30G01020.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|341564gene_10214Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100551g1gene9699Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G01020.1NO30G01020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G01020.2NO30G01020.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G01020 ID=NO30G01020|Name=NO30G01020|organism=Nannochloropsis oceanica|type=gene|length=5542bp
GGGGAAGAGAACCAAAAAATGCCTGCACCACGAAACCCACAATCCAGCAT
CCCTTTGCACGCGGACAGTGACTGAGGGAAGAAAGGAGGCAGGTAGAAAG
GGAGGGTGGGACGCACCGGATGGTGAGTTCCACTGTACTAACTACTGAAC
TATTAATGAATGGCTGCGATGTGGACCACGGGATGCTCCGGCAGATGATG
CACGTGAGGGAGGAAGAGAATGAAGGAGGATGGTGGTTTTCAGAATGACG
GGATCGATGTCCTTGGTATGGAAGGATGGCGGGGACTTTGAGAGGGAGAG
AGGAAGGCGAGAAAGGAAATGAGGATGAAAGGAGGATTAAAAGGAAGGAG
GAAGGTAGGGAGGGAGGGAGAGAGGGTTGCTCACCGATAGGTCCCGACAT
GAGGTTAGAGGCATCAGGTCCTGCGCGCATGGCCCCCACCGGGGTGCTCC
TCCCGCATTTTGGGTAAAGGTAGACGCAAAGAAGGAGGAGGGAAGGCCAA
TGCACAGGGTGGCCGAGACGGTGAGGAGGCGAGGAAGATAGTGGAGAGGG
AGGAATATGCCCACGGCATGAGGGACTTGATGTGCGAGACAGAAATGTCA
TTGCTTATAAAGCAAAAAAATTGCCAGCAGGTGACGAAGTGCTTCGAAAG
GGAGGGTACGACCCTTGCAGGCCGGGCCGTTGGAGGCAACTCACGTCTCC
CTCCTTGCCATGTACACCAAAGCTGCAGCCATTACTTGGCCAGTATACTT
CTCTCCATCACGAGTAGGCGGTATGTGTCACAGGTGGGAAGGACTTTGAT
CGACTTTGCCAATTACCTGCTCCTCCCTCCTCGACTTGACTTTACTCTTA
TCTTCAGCGTGAACTTTTTGGAGGGCTTTTTAATGGTGCGTGCCGAAGCA
GGCCGACGCTGTACCGTGCAGAGCATAACACCCCCACAAAGAGGGTGCTG
AGATCTAATGCGCCTGAATCCTTTCGGGGCTTGTGCGACACAGACACACG
TATGCCCGTCCGTCCCCGTTACAAACCAACCTCCTCCCCCTCCTCCCCCT
CACAACTCACAGGCGCAAGCCCTGGAGGAAGGAGGAGGACTCTAGCACAA
CAGAAATCAAGCAGTCATCCACTAGATTACATTCCATGTCAGCCTCACCG
TCATCGTCATCTTTCTCCTCCATCGTCCTTCCCCTTCTTTGCCTCCTTGC
CGGGGCCGTCGCTGGTGCTGCAGCGATGGCAACTGCTGCGGGTGCTGCTT
CAGGCTCGTACACTGCGAATCTCAAAGTTGAAAAAGAAGATGATGAAAAG
AAACGAGATCTTCAACAGCAAACGCAGGAGAAGGAGGCGAGAGGGAGGGC
ATATGAAGCAGCAGCACCAGCGGCACCCGCAGCAGCAGCAGCAGCAGCAT
CAACCGCAGCCACAGCAGAAGCAACAACGGTAGAAGCAGAGGCGGCCTCC
ATTCTTTCCTTGTGGTTCGACGGCGGGCAGGACATAGAGAGCAACTACAG
GCATCGTTGGTTTTGTGCGCCGGGCAGTGAACGGCAACTGGCTTTTGACA
AAGAGgtaagcgctcgccctccctcccttcctccctccctctctctaaac
accctgccctgcactaccatccttccttcttatttccccctttcttcttt
cccccctagtcccgccctaatccacctcttccaagaggcccatcttctgt
cctcttttcctttcgtgtgcctccacccacacatccatataacctgaccc
tcccctctctcaccctccccttctcccattctccctcctacccctaatcc
accccatcgaaaatccccgttttcaataccttcccctccgcccctccagt
tgccttactcgtgaaagattcacgtgatcctcccctctctgatcctatcc
tactcccatttcccctatccaagATTCATAGCCGTTACAGTCTTCTCCTT
CAACGGCTAGCATCGGACGAAGAGAAACGGAAAGAATGGCAAAAGACGCC
CAAAGAGCTCCTCGCTCTCCTCATCCTCTTTGACCAGCTCGGCCGGCACA
TCAACCGCCACCATACCCGGATGAAGAGGGAGGGACCGACGGAGGGAGGG
ACAGAGGAGGGGAAGGAGGGAGGGGAAGAGGGAGGGACCGCGAGGTCATA
CCCTAGTCAAGGCCAAACGGACGGTATTGCCCTGGGCCTGGCACGGGAGA
TGCAATCAAGAGGGTGGCTATCGCACCTCCACCTCTCTGTCCCTGAGCAT
GTCTTTGCCCTCATGCCTCTCCGGCACTCACCGACTGTGGGGAGgtaggt
ccttccctccctccctccgtcccgccctcctttccttcctcttcctggta
ttcaccaaacagcacccgccctaaccatctttcctgaccctccctccctc
cctccctccctccctccctctttccccagCCTCCAGGAAGTCCTCTGTCA
CATCGACAGCCGAGAAACAGCAGAAGAGCAAGCGAAGAACCTCCTGCACA
AATTCCGCAAGACCACAATGCGgtacgcttccctccctccctccctccct
tcctccctccctccctccctccctccctctcccacagcatccactccccc
actcaactcttcctcccttcctctctccctccctccctccctccttgagA
AAACTCCAAGAGCTCTCCGACAAGGCCCCTGAAGACAGCGACATTCTGGA
ACGACCCCCCCTCCCCCTCCCCCTCCTTCCCTCCCTCCTTCCCTCCCTCC
TTCGGCACCCCGTCGCCCAGGCCATGAAGGCCTACCTCCAACGACAGGGG
GAAGGCGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCG
gtgtgtgtctctctgtccgggggcgttgattccatggtcatcgcaaaatt
gctctgggtctttcgggcggaaatagggtagggagggagggagggaggga
gggagggagggagggagggaggagagggaggaagggaagagagagagaaa
gggagaggaggaggaatggagggagcaagggaaggaggaaaggagaaatg
aacacagccttccagagacgatttgttcacacgctcgcctgccctccctc
tctccctacctccctcccccttgtagCTACAAGAATGTGGTGTGCATTCA
CCTCGATTATGGCAACCGACCCGAAAGCGCGCGAGAAGCCGCGTACGTGG
AGCAATGGTGTCAGgtacgcccgccctttctcccccgcttcctccctcgc
tccctccctccctccctcctttccggctgatgtttcctcggtcctatact
tcccctcttctcctcactccctccgtccttcccgcctttcccccctcccc
cctccctccaacagGAACACCAACTCCGTTTCCACAAGCATACCTACCCT
CCCTCCCTCACTCGTTGCAGCACCGCGCGCGACCGTTACGAAAAAGAAGC
CAGAGAAATCCGTTACGCCACTTACCGGCACATTCTAACGGAAACTGGCG
CCAGAGCTGTCCTCCTCGGTCATCACCGAGGCGACGTCGAGgtaagcgcc
cctttcctccttccctcccttcctccctccctccctccttcccttctgcg
ctccagatcttcccttttgtccattccggatacctcccaaaagtcatctc
gctaacaccccccaccaccactccctccctccctcagGAAAACGTCCTCT
CCAACACGCTGCGTGGTGCGGGGCCTCTGCATCTGTCAGGGATGGAAGAA
ACGGCTTCTGTTGCCGGGGTCTGCGTACATCGTCCTCTGCTCCACCTCCA
GAAGCATCAAATTTACGACTTTGCACATACATTTGGGGTGCCTTATTTCA
AGgtatataaccttccctcccctcctttctaccctcccttaggactgtga
gctcgcgctcattttccagtctcatcctccctccctccctccctccctcc
ctccctccctccctccttcagGACACCACCCCATCGTGGTCAACCCGCGG
CAAGCTCCGACGGCAACTCTGGCCGCTTTTAACGGACATGTACGGCGAAG
GCTTCCCCACCCACCTGTCTCTGCTGGCACGTGAATCTGATGCGCTCCGG
GCGTTGGTATATGACCTTATTTTCCAACCCTTCTGGAAGAAAGTGAAGAA
AGGAAAGGTGGCGATGCATGTGCTGGTGGGAGAAGAGGAGCAGAAACAGg
tattgatatggcttcactggttgttattacggtactgattcgtattatca
gtgaatgagtgatggatattgtgactataatgaagtagtgtttcataagt
acttattaattcatattggattatcactaacttacaaggctagacaaatc
ccttcccatcatcccatccatgtgttggtcttccgggtatgcggtctctt
ggattttctcgtcatagacattgtctgcttatttctttttcccctcttat
tcttcaacgagcaagaactcatcaacctccctccctcctccgctccctcc
cttcctccctcttctagTCCCTCTTTTTTTGGCGCGAAGTCCTACGGGAG
CTCGTCCACAGTCGAGGTCAAGGCATGCTGTCCGACAAGGGCCTGGCCAT
CCTCCTCCTCCACCTCTACCAGCAGCAGCATCAGCAGCACCAGAAGCATC
GGCAGCAGCAGCAGCAGCAGCCACCGCAAGGAAGGATGGAGGGAGGGAAG
GAGGGAAGGAGGGAGGGGGGAAGGGAGGTCTGGTTGCAGTTGCGAAAGGA
TTACGCCGTGCTGTTGCTATGGAAAGAGgtggggaagacgcaggagggag
ggaagaaagggagggagggagggagggagggaaggagggtgcggttgttc
attttccggccgggagtgataagGTATTGGGACCAGAGGAAGGAAGCGAC
GGAGGCAGCGAAGGTGGAAGAGAGGAGGGCAAGAGAAGAGGTAGTGGTGC
TGGAGGGAGGAAGGGGGGGAGGGGGGAGGAAGGGAGGGAGGTCGTGGTGG
CTGGATGGGGAATACGAACAGTACCAGCATTGCGAAAAAGGGAGGATGGG
AAGGAGGGGAGGACGGAGGAAGGGAGGGAGGGACGAACGGAGGGAAACAA
CGACAAGTCCCAGCTGAACTACAACAACGCCCCTTCCCATTGTAAGGATA
GAGTTGACGAGGAAGAGGAGCTGGAGGGGGAGAAGGGAGAGGAGGGAGAG
GGCGACGACGCTGCCCTCCTCCACCTCGCCACGCACGGTTCGTTTACCCA
CCCTCTCGTCCTCCCTCCCTGTCCCAAGTGCCAAGGCCCGACACTCATGG
GGTTTTACCAGCATGAGAGAAGGAAGGGAAATGGTGGGTATCGAGAGCTA
GGACGTTTCGTGCAGGCGTTGCCGCTGAAGGTGAAGCGATCCTTGCCCTT
GGTGACACCATACTGCCCCAGATGTGAGGGAGGGCCTGCTGCACCGACAG
CTGCTCCTGCTTCCGCTACTGCCGCTATTGCTGCTACTGTTCTACCTGCC
GCTGCGCGGTCAGTGCAGGTGTCATATAGGTATTTGGGATAA
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protein sequence of NO30G01020.1

>NO30G01020.1-protein ID=NO30G01020.1-protein|Name=NO30G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=639bp
MSLPSCLSGTHRLWGASRKSSVTSTAEKQQKSKRRTSCTNSARPQCELSD
KAPEDSDILERPPLPLPLLPSLLPSLLRHPVAQAMKAYLQRQGEGGREGG
REGGREGGRRYKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTY
PPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEEN
VLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVP
YFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVY
DLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGML
SDKGLAILLLHLYQQQHQQHQKHRQQQQQQPPQGRMEGGKEGRREGGREV
WLQLRKDYAVLLLWKEVLGPEEGSDGGSEGGREEGKRRGSGAGGRKGGRG
EEGREVVVAGWGIRTVPALRKREDGKEGRTEEGREGRTEGNNDKSQLNYN
NAPSHCKDRVDEEEELEGEKGEEGEGDDAALLHLATHGSFTHPLVLPPCP
KCQGPTLMGFYQHERRKGNGGYRELGRFVQALPLKVKRSLPLVTPYCPRC
EGGPAAPTAAPASATAAIAATVLPAAARSVQVSYRYLG*
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protein sequence of NO30G01020.2

>NO30G01020.2-protein ID=NO30G01020.2-protein|Name=NO30G01020.2|organism=Nannochloropsis oceanica|type=polypeptide|length=891bp
MSASPSSSSFSSIVLPLLCLLAGAVAGAAAMATAAGAASGSYTANLKVEK
EDDEKKRDLQQQTQEKEARGRAYEAAAPAAPAAAAAAASTAATAEATTVE
AEAASILSLWFDGGQDIESNYRHRWFCAPGSERQLAFDKEIHSRYSLLLQ
RLASDEEKRKEWQKTPKELLALLILFDQLGRHINRHHTRMKREGPTEGGT
EEGKEGGEEGGTARSYPSQGQTDGIALGLAREMQSRGWLSHLHLSVPEHV
FALMPLRHSPTVGSLQEVLCHIDSRETAEEQAKNLLHKFRKTTMRKLQEL
SDKAPEDSDILERPPLPLPLLPSLLPSLLRHPVAQAMKAYLQRQGEGGRE
GGREGGREGGRRYKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKH
TYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVE
ENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFG
VPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRAL
VYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQG
MLSDKGLAILLLHLYQQQHQQHQKHRQQQQQQPPQGRMEGGKEGRREGGR
EVWLQLRKDYAVLLLWKEVLGPEEGSDGGSEGGREEGKRRGSGAGGRKGG
RGEEGREVVVAGWGIRTVPALRKREDGKEGRTEEGREGRTEGNNDKSQLN
YNNAPSHCKDRVDEEEELEGEKGEEGEGDDAALLHLATHGSFTHPLVLPP
CPKCQGPTLMGFYQHERRKGNGGYRELGRFVQALPLKVKRSLPLVTPYCP
RCEGGPAAPTAAPASATAAIAATVLPAAARSVQVSYRYLG*
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