NO30G01020, NO30G01020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G01020 vs. NCBI_GenBank
Match: GAX27959.1 (hypothetical protein FisN_32Lh019 [Fistulifera solaris]) HSP 1 Score: 239.2 bits (609), Expect = 3.500e-59 Identity = 123/246 (50.00%), Postives = 158/246 (64.23%), Query Frame = 0 Query: 114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360 +V +H+DY NR ES+ EA YV+++C + + + +TR TARD YE+ AREIRY YR + E +LLGHH+GD+ ENVLSN +G GPL LSGM + GV + RPLL L+K I+D+AH FGVPYFKDTTP WSTRGKLR +L PLL ++YGEG +LS LA ESD RAL Y L QPF + + + ++ Q LFFW+ VLRE++HS G GM SDK + L Sbjct: 306 LVAVHIDYANRRESSAEAQYVQRYCDQLGIVYRCRRI-DEVTRGITARDEYERIAREIRYQAYRDAIAEFDGIGILLGHHKGDLRENVLSNAHKGCGPLDLSGMTAVSQNDGVTLLRPLLPLEKSTIFDYAHQFGVPYFKDTTPHWSTRGKLRNRLMPLLEEVYGEGSMNNLSALAVESDECRALFYQLALQPFLDQTTYKPMGLQFATAPWKE-QGLFFWKFVLREVLHSAGLGMFSDKSVVSFL 549
BLAST of NO30G01020 vs. NCBI_GenBank
Match: GAX20637.1 (hypothetical protein FisN_32Hh019 [Fistulifera solaris]) HSP 1 Score: 238.4 bits (607), Expect = 6.000e-59 Identity = 123/246 (50.00%), Postives = 158/246 (64.23%), Query Frame = 0 Query: 114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360 +V +H+DY NRPES+ EA YV+ +C + + + +TR TARD YE+ AREIRY YR + E +LLGHH+GD+ ENVLSN +G GPL LSGM + GV + RPLL L+K I+D+AH FGVPYFKDTTP WSTRGKLR +L PLL ++YGEG +LS LA ESD RAL + L QPF + + + ++ Q LFFW+ VLRE++HS G GM SDK + L Sbjct: 340 LVAVHIDYANRPESSAEAQYVQHYCDQLGIVYRCRRI-DEVTRGITARDEYERIAREIRYQAYRDAIEEFDGIGILLGHHKGDLRENVLSNAHKGCGPLDLSGMTAVSQNDGVTLLRPLLPLEKIAIFDYAHQFGVPYFKDTTPHWSTRGKLRNRLVPLLEEVYGEGSMNNLSALAVESDECRALFHQLALQPFLDQTTYKPMGLQFATAPWKE-QGLFFWKFVLREVLHSAGLGMFSDKSVVSFL 583
BLAST of NO30G01020 vs. NCBI_GenBank
Match: EJK48013.1 (hypothetical protein THAOC_33226 [Thalassiosira oceanica]) HSP 1 Score: 237.3 bits (604), Expect = 1.300e-58 Identity = 134/306 (43.79%), Postives = 176/306 (57.52%), Query Frame = 0 Query: 114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGAR-------AVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILLLHLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWLQLRKDYAVLL 413 +V IH+DY NRPES EAAYVE++ ++ ++F +TR TARD YE+ AREIR+ YR E + ++LGHHRGD+ ENVLSN RG GPL LSGM E ++ GV + RPLL L+K IYD++HT+GVPYFKDTTP WSTRGKLR +L PLL ++YGEG +LS LA ESD R L+ + + PF +V K + + +SLFFW+ VLR+++H+ G+GM SDK ++ L + WLQ RKDYAV L Sbjct: 508 IVAIHIDYANRPESGAEAAYVERFSEKLGIQFTLRKI-DEITRGVTARDDYERIAREIRFDIYRRTCAEVSSDGTVQRGVGIMLGHHRGDLRENVLSNAHRGCGPLDLSGMTEVSTNDGVVLFRPLLFLEKSFIYDYSHTYGVPYFKDTTPHWSTRGKLRNRLLPLLEEIYGEGSMNNLSTLATESDDARELIGETVVTPFMSQVNKHPMGF-TFETAPWKGRSLFFWKFVLRQVLHNSGRGMFSDKSVSSFLERIRVGTIKEG------------------------------WLQCRKDYAVYL 781
BLAST of NO30G01020 vs. NCBI_GenBank
Match: CBN75006.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 235.3 bits (599), Expect = 5.100e-58 Identity = 129/272 (47.43%), Postives = 161/272 (59.19%), Query Frame = 0 Query: 114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTET--------------------------GARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360 VV IH+DYGNR ES REA +V+ WC H + F+K + R TARD YEK AREIR+ Y+ L G AV+ GHH GDVEENVL+N ++G L L+GM +V GV V RP+L K +YDFAH FGVPYFKDTTPSWSTRGKLRRQL P++ D++G G HLS +ARESD LR LV+ +FQP W K + + + V E + L FW+EVLR+LVH G M+ DK L + + Sbjct: 18 VVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAI-GEVRRGVTARDEYEKVAREIRFDAYKAALGGRSKDGXXXXXXXXXXXXXXEEKGEGGGGRPAVMFGHHEGDVEENVLTNLIKGCSILELAGMSPENTVNGVRVWRPMLPFGKDVVYDFAHKFGVPYFKDTTPSWSTRGKLRRQLIPMMEDVFGSGVLGHLSAVARESDDLRDLVHRELFQPVWDKAVTQPLGLRLDV-ESYRSHGLLFWKEVLRQLVHKMGMPMVRDKTLGMFV 287
BLAST of NO30G01020 vs. NCBI_GenBank
Match: CCI41336.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 234.2 bits (596), Expect = 1.100e-57 Identity = 115/251 (45.82%), Postives = 159/251 (63.35%), Query Frame = 0 Query: 111 YKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSR-GQGMLSDKGLAILLL 361 Y +V IH+DY NRPESA E YV++WC ++F+ +TR T RD YEK AR+IRY+TYR IL + G + GHHRGDV+EN++SN ++G+ L+L+GM ET+ GV + RP+L K I+DFAH +G+PYFKDTTP+WSTRGKLR QL PLL DMYG+GF ++S L ES L+ + I +P V VA+ Q F W+E+LR++ H + G M+ +K + L++ Sbjct: 249 YYGIVAIHIDYANRPESAAEHTYVKEWCDRLDIQFYARRI-DEVTRGETKRDEYEKVARDIRYSTYRDILKKHGIPGICFGHHRGDVQENIISNMMKGSSLLNLNGMSETSVANGVVIWRPMLQFDKSAIFDFAHRYGIPYFKDTTPAWSTRGKLRNQLMPLLKDMYGDGFLQNVSNLGTESTQCSELIQENIMRPIMSSVHSSSVAVWFSC-TLLANQPYFIWKEILRQICHFKMGDHMIREKPIRELMI 497
BLAST of NO30G01020 vs. NCBI_GenBank
Match: CCA21772.1 (tRNA(Ile)lysidine synthase putative [Albugo laibachii Nc14]) HSP 1 Score: 233.0 bits (593), Expect = 2.500e-57 Identity = 116/250 (46.40%), Postives = 158/250 (63.20%), Query Frame = 0 Query: 111 YKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSR-GQGMLSDKGLAILL 360 Y +V IH+DYGNRPESA E +YV+ WC ++F+ +TR T RD YEK AR+IRY+TYR IL + + GHHRGDV+ENV+SN ++G L L+GM ET++ GV + RP+L K I+DFAH +G+PYFKDTTP+WSTRGKLR QL PLL DMYG+G+ ++S L ES L+ + I P V+ VA+ E Q F W+E+LR++ H + G M+ +K + L+ Sbjct: 250 YYGIVAIHIDYGNRPESAAECSYVKYWCDRLDIQFYARRI-DEVTRGETKRDEYEKIARDIRYSTYRSILEKHSIPGICFGHHRGDVQENVVSNMMKGLSLLSLNGMSETSTANGVVIWRPMLEFDKSTIFDFAHRYGIPYFKDTTPAWSTRGKLRNQLMPLLRDMYGDGYLHNISNLGAESIQCNDLMQENIMTPIMSSVQSSSVAVWFSCSLLE-NQPFFIWKEILRQICHFKLGGHMIREKPIRELM 497
BLAST of NO30G01020 vs. NCBI_GenBank
Match: XP_002290025.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93562.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 231.9 bits (590), Expect = 5.600e-57 Identity = 135/308 (43.83%), Postives = 172/308 (55.84%), Query Frame = 0 Query: 114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTET---GAR------AVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILLLHLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWLQLRKDYAVLL 413 ++CIH+DY NRPES EAAYV ++C + +F +TR ARD YE+ AREIR+ YR E G + V+LGHHRGD+ ENV+SN +G GPL LSGM + GV + RPLL L+K I+D+AHTFGVPYFKDTTP+WSTRGKLR +L PLL ++YGEG +LS LA ESD RAL+ + PF +KVK + + V + LFFW+ VLR ++H G+GM SDK + L + WLQ RKDYAV L Sbjct: 567 IICIHIDYANRPESGAEAAYVGRYCHQIGAQFVCRKI-DEVTRGVNARDDYERIAREIRFGLYRQYCGEARRIGGQESDIGIGVMLGHHRGDLRENVISNAHKGCGPLDLSGMTSVSKNDGVTLFRPLLPLEKTFIFDYAHTFGVPYFKDTTPNWSTRGKLRNRLLPLLEEIYGEGSMDNLSSLAEESDDARALIQQTVMGPFMEKVKYSTMGI-VFETIPWKDCGLFFWKFVLRNVLHGAGRGMFSDKSVESFLDRIASTKLKEG------------------------------WLQCRKDYAVYL 842
BLAST of NO30G01020 vs. NCBI_GenBank
Match: XP_002902233.1 (tRNA(Ile)-lysidine synthase, putative [Phytophthora infestans T30-4] >EEY56905.1 tRNA(Ile)-lysidine synthase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 229.2 bits (583), Expect = 3.700e-56 Identity = 119/250 (47.60%), Postives = 158/250 (63.20%), Query Frame = 0 Query: 114 VVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHS-RGQGMLSDKGLAILLLHL 363 +V +HLDYGNRPES E YV +WC+ + FH + R +T RD YEK +REIRY+TY ++ + + GHHRGDV+ENV+SN ++G L+L+GM+ ++ V GV + RPLL L+K I++FAH +GVPYFKDTTP WSTRGKLR L PLL DMYG+GF +LS L ES LV + P K V + VA+ V G + QS F W+EV R++ HS G M+ +K L L+ L Sbjct: 256 IVAVHLDYGNRPESGAECDYVRRWCERFGIVFHVRRI-DEVKRATTRRDDYEKISREIRYSTYAEVMQKYHIPGMCFGHHRGDVQENVISNMMKGLSLLNLNGMQASSVVNGVRIWRPLLDLEKDVIFEFAHRYGVPYFKDTTPKWSTRGKLRNHLVPLLRDMYGDGFLNNLSALGAESTQCAELVDSRVLAPIMKTVGQSDVAVWVDCGLLKD-QSFFVWKEVFRQICHSIMGNSMVREKPLHELIQKL 503
BLAST of NO30G01020 vs. NCBI_GenBank
Match: XP_022838476.1 (tRNA(Ile)-lysidine/2-thiocytidine synthase [Ostreococcus tauri] >CEF97082.1 tRNA(Ile)-lysidine/2-thiocytidine synthase [Ostreococcus tauri]) HSP 1 Score: 228.8 bits (582), Expect = 4.800e-56 Identity = 111/247 (44.94%), Postives = 162/247 (65.59%), Query Frame = 0 Query: 113 NVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360 +VV +H+DY NRPES EA +V+ W H ++F + T ++ R T R++YE E+R+IRY Y+ + G AVLLGHH GDV+EN+++N +RGA L ++GM++ V GV + RP+L K + DFAHT+GVPYF D+TP+WSTRGKLR QL PLL DM+G+GF ++S++ SD L +V + +F+PFW K V +V Q +FFW++V+RE+ H G ML ++ + +LL Sbjct: 279 DVVTLHIDYKNRPESTEEADFVDDWSVRHGMKFERCTV-DAIRRGVTPREQYEIESRKIRYGFYKKSGQKHGFPAVLLGHHHGDVQENIITNLMRGANLLSVNGMDKRGVVEGVRIWRPMLPHNKVDVLDFAHTYGVPYFLDSTPTWSTRGKLRNQLVPLLEDMFGDGFMRNVSMIGENSDQLSEMVDNALFKPFWNDRKMSDVGCYVDC-TPYISQPIFFWKQVIREMCHGLGASMLKERSVRLLL 523
BLAST of NO30G01020 vs. NCBI_GenBank
Match: OUS43805.1 (hypothetical protein BE221DRAFT_78622 [Ostreococcus tauri]) HSP 1 Score: 228.4 bits (581), Expect = 6.200e-56 Identity = 111/247 (44.94%), Postives = 162/247 (65.59%), Query Frame = 0 Query: 113 NVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQGMLSDKGLAILL 360 +VV +H+DY NRPES EA +V+ W H ++F + T ++ R T R++YE E+R+IRY Y+ + G AVLLGHH GDV+EN+++N +RGA L ++GM++ V GV + RP+L K + DFAHT+GVPYF D+TP+WSTRGKLR QL PLL DM+G+GF ++S++ SD L +V + +F+PFW K V +V Q +FFW++V+RE+ H G ML ++ + +LL Sbjct: 886 DVVTLHIDYKNRPESTEEADFVDDWSVRHGMKFERCTV-GAIRRGVTPREQYEIESRKIRYGFYKKSGQKHGFPAVLLGHHHGDVQENIITNLMRGANLLSVNGMDKRGVVEGVRIWRPMLPHNKVDVLDFAHTYGVPYFLDSTPTWSTRGKLRNQLVPLLEDMFGDGFMRNVSMIGENSDQLSEMVDNALFKPFWNDRKMSDVGCYVDC-TPYISQPIFFWKQVIREMCHGLGASMLKERSVRLLL 1130 The following BLAST results are available for this feature:
BLAST of NO30G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G01020 ID=NO30G01020|Name=NO30G01020|organism=Nannochloropsis oceanica|type=gene|length=5542bpback to top protein sequence of NO30G01020.1 >NO30G01020.1-protein ID=NO30G01020.1-protein|Name=NO30G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=639bpback to top protein sequence of NO30G01020.2 >NO30G01020.2-protein ID=NO30G01020.2-protein|Name=NO30G01020.2|organism=Nannochloropsis oceanica|type=polypeptide|length=891bpback to top Synonyms
Publications
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