NO30G01020.2, NO30G01020.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO30G01020.2
Unique Name	NO30G01020.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3808
Alignment location	chr30:373963..379504 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr30	genome	chr30:373963..379504 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO30G01020.2 vs.
Match: OWZ09837.1 (TRNA(Ile)-lysidine synthetase [Phytophthora megakarya])

HSP 1 Score: 316.2 bits (809), Expect = 3.200e-82
Identity = 203/534 (38.01%), Postives = 280/534 (52.43%), Query Frame = 0

Query:  101 AEAASILSLWFDGGQDIESNYRHRWFCAPGSERQLAFDKEIHSRYSLLLQRLASDEEKRKEWQKTPKELLALLILFDQLGRHINRHHTRMKREGPTEGGTEEGKEGGEEGGTARSYPSQGQTDGIALGLARE-MQSRGWLSHLHLSVPEHVFALMPLRHSPTVGSLQEVLCHIDSRETAEEQAKNLLHKFRKTTMRKLQELSDKAPEDSDILERPPLPLPLLPSLLPSLLRHPVAQAMKAYLQRQG-----------EGGREG-------GREGGREGGRRYKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKHTYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVEENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFGVPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRALVYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHS-RGQGMLSDKGLAILLLHL 615
            +EA  +LS WFDG Q     YR +WF + GS+RQ A D EI SR+  LL R  + E   + W++ P   +AL+++ DQ  RH+ R       E   +                       + D  AL +  + +    W  H  L+VP  VFALMPLRHSPT   L EVL  I+ R   +EQ   LL KFR+TT  +LQ L       +D+ +   L    + +    + R+ + +AM  YL                GG +         +   + GG    ++V +HLDYGNR ESA E  YV +WC+   + FH       + R +T RD YEK +REIRY+TY  ++ +     +  GHHRGDV+ENV+SN ++G   L+L+GM+ ++ V GV + RPLL   K  I++FAH +G+PYFKDTTP WSTRGKLR  L PLL+DMYGEGF  +LS L  ES     LV   +  P  K V + +VA+ V  G     Q  F W+EV R++ HS  G  M+ +K L  L+  L
Sbjct:    3 SEAQQVLSFWFDGDQS--ETYRSKWFPSSGSDRQKATDVEISSRFGDLLARAEAGE--LETWRERPDTCVALILVLDQFARHVYRDRRITTNEEQLK-----------------------RNDAHALAIVEQSLLPNCW--HETLAVPRFVFALMPLRHSPTPDRLNEVLTAIEKRRQLQEQHGELLEKFRRTTTGRLQHLRGGPETTTDVSDEDILERAFMETDESDMPRNRLYRAMDEYLTMMTTHEYSHLAVSLSGGVDSMVVAYLMHKLSEKHGGF---SIVAVHLDYGNRAESAAECNYVRRWCERFGIIFHVRKID-EVKRATTRRDDYEKISREIRYSTYAEVMEQYDIPGMCFGHHRGDVQENVISNMMKGLSLLNLNGMQASSIVNGVRIWRPLLDFDKDVIFEFAHRYGIPYFKDTTPKWSTRGKLRNHLVPLLSDMYGEGFLNNLSALGAESTQCAELVDSQVLAPIMKSVGQSEVAVWVDCGLLSD-QPFFVWKEVFRQICHSIMGNSMVREKPLHELIQKL 502

The following BLAST results are available for this feature:

BLAST of NO30G01020.2 vs.

BLAST of NO30G01020.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
OWZ09837.1	3.200e-82	38.01	TRNA(Ile)-lysidine synthetase [Phytophthora megaka...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO30G01020	NO30G01020	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO30G01020.2	NO30G01020.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO30G01020.2.cds1	NO30G01020.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds2	NO30G01020.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds3	NO30G01020.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds4	NO30G01020.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds5	NO30G01020.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds6	NO30G01020.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds7	NO30G01020.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds8	NO30G01020.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds9	NO30G01020.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01020.2.cds10	NO30G01020.2.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr30:373963..379504+
coding sequence from alignment at chr30:373963..379504+

mRNA sequence

>NO30G01020.2 ID=NO30G01020.2|Name=NO30G01020.2|organism=Nannochloropsis oceanica|type=mRNA|length=3808bp
GGGGAAGAGAACCAAAAAATGCCTGCACCACGAAACCCACAATCCAGCAT
CCCTTTGCACGCGGACAGTGACTGAGGGAAGAAAGGAGGCAGGTAGAAAG
GGAGGGTGGGACGCACCGGATGGTGAGTTCCACTGTACTAACTACTGAAC
TATTAATGAATGGCTGCGATGTGGACCACGGGATGCTCCGGCAGATGATG
CACGTGAGGGAGGAAGAGAATGAAGGAGGATGGTGGTTTTCAGAATGACG
GGATCGATGTCCTTGGTATGGAAGGATGGCGGGGACTTTGAGAGGGAGAG
AGGAAGGCGAGAAAGGAAATGAGGATGAAAGGAGGATTAAAAGGAAGGAG
GAAGGTAGGGAGGGAGGGAGAGAGGGTTGCTCACCGATAGGTCCCGACAT
GAGGTTAGAGGCATCAGGTCCTGCGCGCATGGCCCCCACCGGGGTGCTCC
TCCCGCATTTTGGGTAAAGGTAGACGCAAAGAAGGAGGAGGGAAGGCCAA
TGCACAGGGTGGCCGAGACGGTGAGGAGGCGAGGAAGATAGTGGAGAGGG
AGGAATATGCCCACGGCATGAGGGACTTGATGTGCGAGACAGAAATGTCA
TTGCTTATAAAGCAAAAAAATTGCCAGCAGGTGACGAAGTGCTTCGAAAG
GGAGGGTACGACCCTTGCAGGCCGGGCCGTTGGAGGCAACTCACGTCTCC
CTCCTTGCCATGTACACCAAAGCTGCAGCCATTACTTGGCCAGTATACTT
CTCTCCATCACGAGTAGGCGGTATGTGTCACAGGTGGGAAGGACTTTGAT
CGACTTTGCCAATTACCTGCTCCTCCCTCCTCGACTTGACTTTACTCTTA
TCTTCAGCGTGAACTTTTTGGAGGGCTTTTTAATGGTGCGTGCCGAAGCA
GGCCGACGCTGTACCGTGCAGAGCATAACACCCCCACAAAGAGGGTGCTG
AGATCTAATGCGCCTGAATCCTTTCGGGGCTTGTGCGACACAGACACACG
TATGCCCGTCCGTCCCCGTTACAAACCAACCTCCTCCCCCTCCTCCCCCT
CACAACTCACAGGCGCAAGCCCTGGAGGAAGGAGGAGGACTCTAGCACAA
CAGAAATCAAGCAGTCATCCACTAGATTACATTCCATGTCAGCCTCACCG
TCATCGTCATCTTTCTCCTCCATCGTCCTTCCCCTTCTTTGCCTCCTTGC
CGGGGCCGTCGCTGGTGCTGCAGCGATGGCAACTGCTGCGGGTGCTGCTT
CAGGCTCGTACACTGCGAATCTCAAAGTTGAAAAAGAAGATGATGAAAAG
AAACGAGATCTTCAACAGCAAACGCAGGAGAAGGAGGCGAGAGGGAGGGC
ATATGAAGCAGCAGCACCAGCGGCACCCGCAGCAGCAGCAGCAGCAGCAT
CAACCGCAGCCACAGCAGAAGCAACAACGGTAGAAGCAGAGGCGGCCTCC
ATTCTTTCCTTGTGGTTCGACGGCGGGCAGGACATAGAGAGCAACTACAG
GCATCGTTGGTTTTGTGCGCCGGGCAGTGAACGGCAACTGGCTTTTGACA
AAGAGATTCATAGCCGTTACAGTCTTCTCCTTCAACGGCTAGCATCGGAC
GAAGAGAAACGGAAAGAATGGCAAAAGACGCCCAAAGAGCTCCTCGCTCT
CCTCATCCTCTTTGACCAGCTCGGCCGGCACATCAACCGCCACCATACCC
GGATGAAGAGGGAGGGACCGACGGAGGGAGGGACAGAGGAGGGGAAGGAG
GGAGGGGAAGAGGGAGGGACCGCGAGGTCATACCCTAGTCAAGGCCAAAC
GGACGGTATTGCCCTGGGCCTGGCACGGGAGATGCAATCAAGAGGGTGGC
TATCGCACCTCCACCTCTCTGTCCCTGAGCATGTCTTTGCCCTCATGCCT
CTCCGGCACTCACCGACTGTGGGGAGCCTCCAGGAAGTCCTCTGTCACAT
CGACAGCCGAGAAACAGCAGAAGAGCAAGCGAAGAACCTCCTGCACAAAT
TCCGCAAGACCACAATGCGAAAACTCCAAGAGCTCTCCGACAAGGCCCCT
GAAGACAGCGACATTCTGGAACGACCCCCCCTCCCCCTCCCCCTCCTTCC
CTCCCTCCTTCCCTCCCTCCTTCGGCACCCCGTCGCCCAGGCCATGAAGG
CCTACCTCCAACGACAGGGGGAAGGCGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGCGCTACAAGAATGTGGTGTGCATTCACCTCGA
TTATGGCAACCGACCCGAAAGCGCGCGAGAAGCCGCGTACGTGGAGCAAT
GGTGTCAGGAACACCAACTCCGTTTCCACAAGCATACCTACCCTCCCTCC
CTCACTCGTTGCAGCACCGCGCGCGACCGTTACGAAAAAGAAGCCAGAGA
AATCCGTTACGCCACTTACCGGCACATTCTAACGGAAACTGGCGCCAGAG
CTGTCCTCCTCGGTCATCACCGAGGCGACGTCGAGGAAAACGTCCTCTCC
AACACGCTGCGTGGTGCGGGGCCTCTGCATCTGTCAGGGATGGAAGAAAC
GGCTTCTGTTGCCGGGGTCTGCGTACATCGTCCTCTGCTCCACCTCCAGA
AGCATCAAATTTACGACTTTGCACATACATTTGGGGTGCCTTATTTCAAG
GACACCACCCCATCGTGGTCAACCCGCGGCAAGCTCCGACGGCAACTCTG
GCCGCTTTTAACGGACATGTACGGCGAAGGCTTCCCCACCCACCTGTCTC
TGCTGGCACGTGAATCTGATGCGCTCCGGGCGTTGGTATATGACCTTATT
TTCCAACCCTTCTGGAAGAAAGTGAAGAAAGGAAAGGTGGCGATGCATGT
GCTGGTGGGAGAAGAGGAGCAGAAACAGTCCCTCTTTTTTTGGCGCGAAG
TCCTACGGGAGCTCGTCCACAGTCGAGGTCAAGGCATGCTGTCCGACAAG
GGCCTGGCCATCCTCCTCCTCCACCTCTACCAGCAGCAGCATCAGCAGCA
CCAGAAGCATCGGCAGCAGCAGCAGCAGCAGCCACCGCAAGGAAGGATGG
AGGGAGGGAAGGAGGGAAGGAGGGAGGGGGGAAGGGAGGTCTGGTTGCAG
TTGCGAAAGGATTACGCCGTGCTGTTGCTATGGAAAGAGGTATTGGGACC
AGAGGAAGGAAGCGACGGAGGCAGCGAAGGTGGAAGAGAGGAGGGCAAGA
GAAGAGGTAGTGGTGCTGGAGGGAGGAAGGGGGGGAGGGGGGAGGAAGGG
AGGGAGGTCGTGGTGGCTGGATGGGGAATACGAACAGTACCAGCATTGCG
AAAAAGGGAGGATGGGAAGGAGGGGAGGACGGAGGAAGGGAGGGAGGGAC
GAACGGAGGGAAACAACGACAAGTCCCAGCTGAACTACAACAACGCCCCT
TCCCATTGTAAGGATAGAGTTGACGAGGAAGAGGAGCTGGAGGGGGAGAA
GGGAGAGGAGGGAGAGGGCGACGACGCTGCCCTCCTCCACCTCGCCACGC
ACGGTTCGTTTACCCACCCTCTCGTCCTCCCTCCCTGTCCCAAGTGCCAA
GGCCCGACACTCATGGGGTTTTACCAGCATGAGAGAAGGAAGGGAAATGG
TGGGTATCGAGAGCTAGGACGTTTCGTGCAGGCGTTGCCGCTGAAGGTGA
AGCGATCCTTGCCCTTGGTGACACCATACTGCCCCAGATGTGAGGGAGGG
CCTGCTGCACCGACAGCTGCTCCTGCTTCCGCTACTGCCGCTATTGCTGC
TACTGTTCTACCTGCCGCTGCGCGGTCAGTGCAGGTGTCATATAGGTATT
TGGGATAA

protein sequence of NO30G01020.2

>NO30G01020.2-protein ID=NO30G01020.2-protein|Name=NO30G01020.2|organism=Nannochloropsis oceanica|type=polypeptide|length=891bp
MSASPSSSSFSSIVLPLLCLLAGAVAGAAAMATAAGAASGSYTANLKVEK
EDDEKKRDLQQQTQEKEARGRAYEAAAPAAPAAAAAAASTAATAEATTVE
AEAASILSLWFDGGQDIESNYRHRWFCAPGSERQLAFDKEIHSRYSLLLQ
RLASDEEKRKEWQKTPKELLALLILFDQLGRHINRHHTRMKREGPTEGGT
EEGKEGGEEGGTARSYPSQGQTDGIALGLAREMQSRGWLSHLHLSVPEHV
FALMPLRHSPTVGSLQEVLCHIDSRETAEEQAKNLLHKFRKTTMRKLQEL
SDKAPEDSDILERPPLPLPLLPSLLPSLLRHPVAQAMKAYLQRQGEGGRE
GGREGGREGGRRYKNVVCIHLDYGNRPESAREAAYVEQWCQEHQLRFHKH
TYPPSLTRCSTARDRYEKEAREIRYATYRHILTETGARAVLLGHHRGDVE
ENVLSNTLRGAGPLHLSGMEETASVAGVCVHRPLLHLQKHQIYDFAHTFG
VPYFKDTTPSWSTRGKLRRQLWPLLTDMYGEGFPTHLSLLARESDALRAL
VYDLIFQPFWKKVKKGKVAMHVLVGEEEQKQSLFFWREVLRELVHSRGQG
MLSDKGLAILLLHLYQQQHQQHQKHRQQQQQQPPQGRMEGGKEGRREGGR
EVWLQLRKDYAVLLLWKEVLGPEEGSDGGSEGGREEGKRRGSGAGGRKGG
RGEEGREVVVAGWGIRTVPALRKREDGKEGRTEEGREGRTEGNNDKSQLN
YNNAPSHCKDRVDEEEELEGEKGEEGEGDDAALLHLATHGSFTHPLVLPP
CPKCQGPTLMGFYQHERRKGNGGYRELGRFVQALPLKVKRSLPLVTPYCP
RCEGGPAAPTAAPASATAAIAATVLPAAARSVQVSYRYLG*

mRNA from alignment at chr30:373963..379504+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO30G01020.2 ID=NO30G01020.2|Name=NO30G01020.2|organism=Nannochloropsis oceanica|type=mRNA|length=5542bp|location=Sequence derived from alignment at chr30:373963..379504+ (Nannochloropsis oceanica)
GGGGAAGAGAACCAAAAAATGCCTGCACCACGAAACCCACAATCCAGCAT
CCCTTTGCACGCGGACAGTGACTGAGGGAAGAAAGGAGGCAGGTAGAAAG
GGAGGGTGGGACGCACCGGATGGTGAGTTCCACTGTACTAACTACTGAAC
TATTAATGAATGGCTGCGATGTGGACCACGGGATGCTCCGGCAGATGATG
CACGTGAGGGAGGAAGAGAATGAAGGAGGATGGTGGTTTTCAGAATGACG
GGATCGATGTCCTTGGTATGGAAGGATGGCGGGGACTTTGAGAGGGAGAG
AGGAAGGCGAGAAAGGAAATGAGGATGAAAGGAGGATTAAAAGGAAGGAG
GAAGGTAGGGAGGGAGGGAGAGAGGGTTGCTCACCGATAGGTCCCGACAT
GAGGTTAGAGGCATCAGGTCCTGCGCGCATGGCCCCCACCGGGGTGCTCC
TCCCGCATTTTGGGTAAAGGTAGACGCAAAGAAGGAGGAGGGAAGGCCAA
TGCACAGGGTGGCCGAGACGGTGAGGAGGCGAGGAAGATAGTGGAGAGGG
AGGAATATGCCCACGGCATGAGGGACTTGATGTGCGAGACAGAAATGTCA
TTGCTTATAAAGCAAAAAAATTGCCAGCAGGTGACGAAGTGCTTCGAAAG
GGAGGGTACGACCCTTGCAGGCCGGGCCGTTGGAGGCAACTCACGTCTCC
CTCCTTGCCATGTACACCAAAGCTGCAGCCATTACTTGGCCAGTATACTT
CTCTCCATCACGAGTAGGCGGTATGTGTCACAGGTGGGAAGGACTTTGAT
CGACTTTGCCAATTACCTGCTCCTCCCTCCTCGACTTGACTTTACTCTTA
TCTTCAGCGTGAACTTTTTGGAGGGCTTTTTAATGGTGCGTGCCGAAGCA
GGCCGACGCTGTACCGTGCAGAGCATAACACCCCCACAAAGAGGGTGCTG
AGATCTAATGCGCCTGAATCCTTTCGGGGCTTGTGCGACACAGACACACG
TATGCCCGTCCGTCCCCGTTACAAACCAACCTCCTCCCCCTCCTCCCCCT
CACAACTCACAGGCGCAAGCCCTGGAGGAAGGAGGAGGACTCTAGCACAA
CAGAAATCAAGCAGTCATCCACTAGATTACATTCCATGTCAGCCTCACCG
TCATCGTCATCTTTCTCCTCCATCGTCCTTCCCCTTCTTTGCCTCCTTGC
CGGGGCCGTCGCTGGTGCTGCAGCGATGGCAACTGCTGCGGGTGCTGCTT
CAGGCTCGTACACTGCGAATCTCAAAGTTGAAAAAGAAGATGATGAAAAG
AAACGAGATCTTCAACAGCAAACGCAGGAGAAGGAGGCGAGAGGGAGGGC
ATATGAAGCAGCAGCACCAGCGGCACCCGCAGCAGCAGCAGCAGCAGCAT
CAACCGCAGCCACAGCAGAAGCAACAACGGTAGAAGCAGAGGCGGCCTCC
ATTCTTTCCTTGTGGTTCGACGGCGGGCAGGACATAGAGAGCAACTACAG
GCATCGTTGGTTTTGTGCGCCGGGCAGTGAACGGCAACTGGCTTTTGACA
AAGAGGTAAGCGCTCGCCCTCCCTCCCTTCCTCCCTCCCTCTCTCTAAAC
ACCCTGCCCTGCACTACCATCCTTCCTTCTTATTTCCCCCTTTCTTCTTT
CCCCCCTAGTCCCGCCCTAATCCACCTCTTCCAAGAGGCCCATCTTCTGT
CCTCTTTTCCTTTCGTGTGCCTCCACCCACACATCCATATAACCTGACCC
TCCCCTCTCTCACCCTCCCCTTCTCCCATTCTCCCTCCTACCCCTAATCC
ACCCCATCGAAAATCCCCGTTTTCAATACCTTCCCCTCCGCCCCTCCAGT
TGCCTTACTCGTGAAAGATTCACGTGATCCTCCCCTCTCTGATCCTATCC
TACTCCCATTTCCCCTATCCAAGATTCATAGCCGTTACAGTCTTCTCCTT
CAACGGCTAGCATCGGACGAAGAGAAACGGAAAGAATGGCAAAAGACGCC
CAAAGAGCTCCTCGCTCTCCTCATCCTCTTTGACCAGCTCGGCCGGCACA
TCAACCGCCACCATACCCGGATGAAGAGGGAGGGACCGACGGAGGGAGGG
ACAGAGGAGGGGAAGGAGGGAGGGGAAGAGGGAGGGACCGCGAGGTCATA
CCCTAGTCAAGGCCAAACGGACGGTATTGCCCTGGGCCTGGCACGGGAGA
TGCAATCAAGAGGGTGGCTATCGCACCTCCACCTCTCTGTCCCTGAGCAT
GTCTTTGCCCTCATGCCTCTCCGGCACTCACCGACTGTGGGGAGGTAGGT
CCTTCCCTCCCTCCCTCCGTCCCGCCCTCCTTTCCTTCCTCTTCCTGGTA
TTCACCAAACAGCACCCGCCCTAACCATCTTTCCTGACCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCTTTCCCCAGCCTCCAGGAAGTCCTCTGTCA
CATCGACAGCCGAGAAACAGCAGAAGAGCAAGCGAAGAACCTCCTGCACA
AATTCCGCAAGACCACAATGCGGTACGCTTCCCTCCCTCCCTCCCTCCCT
TCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCCACAGCATCCACTCCCCC
ACTCAACTCTTCCTCCCTTCCTCTCTCCCTCCCTCCCTCCCTCCTTGAGA
AAACTCCAAGAGCTCTCCGACAAGGCCCCTGAAGACAGCGACATTCTGGA
ACGACCCCCCCTCCCCCTCCCCCTCCTTCCCTCCCTCCTTCCCTCCCTCC
TTCGGCACCCCGTCGCCCAGGCCATGAAGGCCTACCTCCAACGACAGGGG
GAAGGCGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCG
GTGTGTGTCTCTCTGTCCGGGGGCGTTGATTCCATGGTCATCGCAAAATT
GCTCTGGGTCTTTCGGGCGGAAATAGGGTAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGAGAGGGAGGAAGGGAAGAGAGAGAGAAA
GGGAGAGGAGGAGGAATGGAGGGAGCAAGGGAAGGAGGAAAGGAGAAATG
AACACAGCCTTCCAGAGACGATTTGTTCACACGCTCGCCTGCCCTCCCTC
TCTCCCTACCTCCCTCCCCCTTGTAGCTACAAGAATGTGGTGTGCATTCA
CCTCGATTATGGCAACCGACCCGAAAGCGCGCGAGAAGCCGCGTACGTGG
AGCAATGGTGTCAGGTACGCCCGCCCTTTCTCCCCCGCTTCCTCCCTCGC
TCCCTCCCTCCCTCCCTCCTTTCCGGCTGATGTTTCCTCGGTCCTATACT
TCCCCTCTTCTCCTCACTCCCTCCGTCCTTCCCGCCTTTCCCCCCTCCCC
CCTCCCTCCAACAGGAACACCAACTCCGTTTCCACAAGCATACCTACCCT
CCCTCCCTCACTCGTTGCAGCACCGCGCGCGACCGTTACGAAAAAGAAGC
CAGAGAAATCCGTTACGCCACTTACCGGCACATTCTAACGGAAACTGGCG
CCAGAGCTGTCCTCCTCGGTCATCACCGAGGCGACGTCGAGGTAAGCGCC
CCTTTCCTCCTTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCCCTTCTGCG
CTCCAGATCTTCCCTTTTGTCCATTCCGGATACCTCCCAAAAGTCATCTC
GCTAACACCCCCCACCACCACTCCCTCCCTCCCTCAGGAAAACGTCCTCT
CCAACACGCTGCGTGGTGCGGGGCCTCTGCATCTGTCAGGGATGGAAGAA
ACGGCTTCTGTTGCCGGGGTCTGCGTACATCGTCCTCTGCTCCACCTCCA
GAAGCATCAAATTTACGACTTTGCACATACATTTGGGGTGCCTTATTTCA
AGGTATATAACCTTCCCTCCCCTCCTTTCTACCCTCCCTTAGGACTGTGA
GCTCGCGCTCATTTTCCAGTCTCATCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCTTCAGGACACCACCCCATCGTGGTCAACCCGCGG
CAAGCTCCGACGGCAACTCTGGCCGCTTTTAACGGACATGTACGGCGAAG
GCTTCCCCACCCACCTGTCTCTGCTGGCACGTGAATCTGATGCGCTCCGG
GCGTTGGTATATGACCTTATTTTCCAACCCTTCTGGAAGAAAGTGAAGAA
AGGAAAGGTGGCGATGCATGTGCTGGTGGGAGAAGAGGAGCAGAAACAGG
TATTGATATGGCTTCACTGGTTGTTATTACGGTACTGATTCGTATTATCA
GTGAATGAGTGATGGATATTGTGACTATAATGAAGTAGTGTTTCATAAGT
ACTTATTAATTCATATTGGATTATCACTAACTTACAAGGCTAGACAAATC
CCTTCCCATCATCCCATCCATGTGTTGGTCTTCCGGGTATGCGGTCTCTT
GGATTTTCTCGTCATAGACATTGTCTGCTTATTTCTTTTTCCCCTCTTAT
TCTTCAACGAGCAAGAACTCATCAACCTCCCTCCCTCCTCCGCTCCCTCC
CTTCCTCCCTCTTCTAGTCCCTCTTTTTTTGGCGCGAAGTCCTACGGGAG
CTCGTCCACAGTCGAGGTCAAGGCATGCTGTCCGACAAGGGCCTGGCCAT
CCTCCTCCTCCACCTCTACCAGCAGCAGCATCAGCAGCACCAGAAGCATC
GGCAGCAGCAGCAGCAGCAGCCACCGCAAGGAAGGATGGAGGGAGGGAAG
GAGGGAAGGAGGGAGGGGGGAAGGGAGGTCTGGTTGCAGTTGCGAAAGGA
TTACGCCGTGCTGTTGCTATGGAAAGAGGTGGGGAAGACGCAGGAGGGAG
GGAAGAAAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGTGCGGTTGTTC
ATTTTCCGGCCGGGAGTGATAAGGTATTGGGACCAGAGGAAGGAAGCGAC
GGAGGCAGCGAAGGTGGAAGAGAGGAGGGCAAGAGAAGAGGTAGTGGTGC
TGGAGGGAGGAAGGGGGGGAGGGGGGAGGAAGGGAGGGAGGTCGTGGTGG
CTGGATGGGGAATACGAACAGTACCAGCATTGCGAAAAAGGGAGGATGGG
AAGGAGGGGAGGACGGAGGAAGGGAGGGAGGGACGAACGGAGGGAAACAA
CGACAAGTCCCAGCTGAACTACAACAACGCCCCTTCCCATTGTAAGGATA
GAGTTGACGAGGAAGAGGAGCTGGAGGGGGAGAAGGGAGAGGAGGGAGAG
GGCGACGACGCTGCCCTCCTCCACCTCGCCACGCACGGTTCGTTTACCCA
CCCTCTCGTCCTCCCTCCCTGTCCCAAGTGCCAAGGCCCGACACTCATGG
GGTTTTACCAGCATGAGAGAAGGAAGGGAAATGGTGGGTATCGAGAGCTA
GGACGTTTCGTGCAGGCGTTGCCGCTGAAGGTGAAGCGATCCTTGCCCTT
GGTGACACCATACTGCCCCAGATGTGAGGGAGGGCCTGCTGCACCGACAG
CTGCTCCTGCTTCCGCTACTGCCGCTATTGCTGCTACTGTTCTACCTGCC
GCTGCGCGGTCAGTGCAGGTGTCATATAGGTATTTGGGATAA

Coding sequence (CDS) from alignment at chr30:373963..379504+

>NO30G01020.2 ID=NO30G01020.2|Name=NO30G01020.2|organism=Nannochloropsis oceanica|type=CDS|length=2673bp|location=Sequence derived from alignment at chr30:373963..379504+ (Nannochloropsis oceanica)
ATGTCAGCCTCACCGTCATCGTCATCTTTCTCCTCCATCGTCCTTCCCCT
TCTTTGCCTCCTTGCCGGGGCCGTCGCTGGTGCTGCAGCGATGGCAACTG
CTGCGGGTGCTGCTTCAGGCTCGTACACTGCGAATCTCAAAGTTGAAAAA
GAAGATGATGAAAAGAAACGAGATCTTCAACAGCAAACGCAGGAGAAGGA
GGCGAGAGGGAGGGCATATGAAGCAGCAGCACCAGCGGCACCCGCAGCAG
CAGCAGCAGCAGCATCAACCGCAGCCACAGCAGAAGCAACAACGGTAGAA
GCAGAGGCGGCCTCCATTCTTTCCTTGTGGTTCGACGGCGGGCAGGACAT
AGAGAGCAACTACAGGCATCGTTGGTTTTGTGCGCCGGGCAGTGAACGGC
AACTGGCTTTTGACAAAGAGATTCATAGCCGTTACAGTCTTCTCCTTCAA
CGGCTAGCATCGGACGAAGAGAAACGGAAAGAATGGCAAAAGACGCCCAA
AGAGCTCCTCGCTCTCCTCATCCTCTTTGACCAGCTCGGCCGGCACATCA
ACCGCCACCATACCCGGATGAAGAGGGAGGGACCGACGGAGGGAGGGACA
GAGGAGGGGAAGGAGGGAGGGGAAGAGGGAGGGACCGCGAGGTCATACCC
TAGTCAAGGCCAAACGGACGGTATTGCCCTGGGCCTGGCACGGGAGATGC
AATCAAGAGGGTGGCTATCGCACCTCCACCTCTCTGTCCCTGAGCATGTC
TTTGCCCTCATGCCTCTCCGGCACTCACCGACTGTGGGGAGCCTCCAGGA
AGTCCTCTGTCACATCGACAGCCGAGAAACAGCAGAAGAGCAAGCGAAGA
ACCTCCTGCACAAATTCCGCAAGACCACAATGCGAAAACTCCAAGAGCTC
TCCGACAAGGCCCCTGAAGACAGCGACATTCTGGAACGACCCCCCCTCCC
CCTCCCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCTTCGGCACCCCGTCG
CCCAGGCCATGAAGGCCTACCTCCAACGACAGGGGGAAGGCGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCGCTACAAGAATGTGGT
GTGCATTCACCTCGATTATGGCAACCGACCCGAAAGCGCGCGAGAAGCCG
CGTACGTGGAGCAATGGTGTCAGGAACACCAACTCCGTTTCCACAAGCAT
ACCTACCCTCCCTCCCTCACTCGTTGCAGCACCGCGCGCGACCGTTACGA
AAAAGAAGCCAGAGAAATCCGTTACGCCACTTACCGGCACATTCTAACGG
AAACTGGCGCCAGAGCTGTCCTCCTCGGTCATCACCGAGGCGACGTCGAG
GAAAACGTCCTCTCCAACACGCTGCGTGGTGCGGGGCCTCTGCATCTGTC
AGGGATGGAAGAAACGGCTTCTGTTGCCGGGGTCTGCGTACATCGTCCTC
TGCTCCACCTCCAGAAGCATCAAATTTACGACTTTGCACATACATTTGGG
GTGCCTTATTTCAAGGACACCACCCCATCGTGGTCAACCCGCGGCAAGCT
CCGACGGCAACTCTGGCCGCTTTTAACGGACATGTACGGCGAAGGCTTCC
CCACCCACCTGTCTCTGCTGGCACGTGAATCTGATGCGCTCCGGGCGTTG
GTATATGACCTTATTTTCCAACCCTTCTGGAAGAAAGTGAAGAAAGGAAA
GGTGGCGATGCATGTGCTGGTGGGAGAAGAGGAGCAGAAACAGTCCCTCT
TTTTTTGGCGCGAAGTCCTACGGGAGCTCGTCCACAGTCGAGGTCAAGGC
ATGCTGTCCGACAAGGGCCTGGCCATCCTCCTCCTCCACCTCTACCAGCA
GCAGCATCAGCAGCACCAGAAGCATCGGCAGCAGCAGCAGCAGCAGCCAC
CGCAAGGAAGGATGGAGGGAGGGAAGGAGGGAAGGAGGGAGGGGGGAAGG
GAGGTCTGGTTGCAGTTGCGAAAGGATTACGCCGTGCTGTTGCTATGGAA
AGAGGTATTGGGACCAGAGGAAGGAAGCGACGGAGGCAGCGAAGGTGGAA
GAGAGGAGGGCAAGAGAAGAGGTAGTGGTGCTGGAGGGAGGAAGGGGGGG
AGGGGGGAGGAAGGGAGGGAGGTCGTGGTGGCTGGATGGGGAATACGAAC
AGTACCAGCATTGCGAAAAAGGGAGGATGGGAAGGAGGGGAGGACGGAGG
AAGGGAGGGAGGGACGAACGGAGGGAAACAACGACAAGTCCCAGCTGAAC
TACAACAACGCCCCTTCCCATTGTAAGGATAGAGTTGACGAGGAAGAGGA
GCTGGAGGGGGAGAAGGGAGAGGAGGGAGAGGGCGACGACGCTGCCCTCC
TCCACCTCGCCACGCACGGTTCGTTTACCCACCCTCTCGTCCTCCCTCCC
TGTCCCAAGTGCCAAGGCCCGACACTCATGGGGTTTTACCAGCATGAGAG
AAGGAAGGGAAATGGTGGGTATCGAGAGCTAGGACGTTTCGTGCAGGCGT
TGCCGCTGAAGGTGAAGCGATCCTTGCCCTTGGTGACACCATACTGCCCC
AGATGTGAGGGAGGGCCTGCTGCACCGACAGCTGCTCCTGCTTCCGCTAC
TGCCGCTATTGCTGCTACTGTTCTACCTGCCGCTGCGCGGTCAGTGCAGG
TGTCATATAGGTATTTGGGATAA

Synonyms

Publications