jgi.p|Nanoce1779_2|611084, gene_10339 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|611084
Unique Namegene_10339
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_54:24281..26946 -

Link to JBrowse

Properties
Property NameValue
TranscriptId611170
ProteinId611084
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_54supercontigscaffold_54:24281..26946 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL076ncniL076Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03520NO09G03520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611084mRNA_10339-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611084mRNA_10339Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|611084

>mRNA_10339-protein ID=mRNA_10339-protein|Name=jgi.p|Nanoce1779_2|611084|organism=Nannochloropsis oceanica|type=polypeptide|length=860bp
MKETQLGCAWSAAVTAATYNIAFPDLNCVYQVLLYWGVTGKTTLRIDGLF
PHVRYFSFQSYDLQSGTPIASLIDYEIKALKGINPFNTEPLRRGKWDASR
ASGRQGQLGEGWDNDNYEVARPYDKAGYKRVRDRNYAQAERGRDRRGGKY
SDDDTKDSSSSWETASNDEDTSTTEASSSKTTSSSYGSYQIHVTDDGNHG
FPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEPGEDAFHHNNQED
YNRTNATSRLWGYVPRPEVSVRYGAWVNEWTGNTMERYKILESCHDDKST
VVKSFLDWKIPQIQGDWSGQSALDNLDDNFVVYTPSSSSRALFANADASY
LFATARNNRSVSAINQGSGSQRKELVARITGRLPTVAHGFMEPQTLYDDK
SDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGPVIDTIMD
VVMEQKYQGQEGWDLDRQFSVVAAPGARLLDRCPPRIYRSDRDLFLKTVQ
PEEREPPAHLAFLYRQILSQWQTRGRLDKSIARAKHDCLGRNDGGHACKL
RSFFVDQMGQQYPSIKYFYCWENVTRGCSCEDSTGKMVGWGNENDADDVD
DDLWSFPHHHHHNHNHNQYLFDDNGEKLEHNHLDFMQGNSEKKANNISSG
GLVTEIGNKTVVPWDPVIPTALITPVASLEHMNESIAPMQPVASVKSVTA
AVPKMLAVPMKTETPLSPMMDTPVDPVINESVSVFVIPDPSMALNVSNLS
GGVHPDAWNQSQAYYYYMQHQKDSNPQAIFDDDRKESTLLVAQNKNQKES
KLLVAADDLIRERQHGEQKQLQEHHEQGQEMQHGLEEQQYHVKEPLQVNE
TKSNEGNKI*
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Synonyms
Publications