NO09G03520, NO09G03520 (gene) Nannochloropsis oceanica

Overview
NameNO09G03520
Unique NameNO09G03520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2981
Alignment locationchr9:1006106..1009086 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1006106..1009086 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO09G03520 vs. NCBI_GenBank
Match: XP_005855631.1 (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >EKU20720.1 hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 146.7 bits (369), Expect = 3.600e-31
Identity = 150/585 (25.64%), Postives = 237/585 (40.51%), Query Frame = 0
Query:  112 QLGCAWSAAVTAATYNIAFPDLNCVYQVLLYWGVTGKTTLRIDGLFPH--VRYFSFQSYDLQSGTPIASLIDYEIKALKGINPFNTEPLRRGKWDASRASGRQGQLGEGWDNDNYEVARPYDKAGYKRVRDRNYAQAERGRDRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSYQIHVTDDGNHGFPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEPGEDAFHHNNQEDYNRTNATSRLWGYVPRPEVSVR-YGAWVNEWTGNTMERYKILESCHDDKSTVVKSFLD----WKIPQIQGDWSGQSALDNLDDNFVVYTPSSSSRA-LFANADASYLFATARNNRSVSAINQGSGSQRKELVARITGRLPTVAHG-FMEPQTLYDDKSDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGPVIDTIMDVVMEQKYQGQ--EGWDLDRQFSVVAAPGARLLDRCPPR---IYRSDRDLFLKTVQPEEREPPAHLAFLYRQILSQWQTRGRLDKSIARAKHDCLGRNDGGHACKLRSFFVDQMGQQYPSIKYFYCWENVT 683
            Q  CAW A +T   YN+A+PDL  +YQVL+    T K   R+ G FP   VRYFS QS ++  G PI+++ DYEI+     +P NT                                             RN    +  R                                           G+Y I+VT  G+ G  NEL+    S      RQC  +   A+++MR YT++P  D    +++ D   +    RL+GY   P V  R + +W ++    + +R+++  +C   +ST V S +       IP             N ++NFV+Y    ++ A ++ N DA+YL A A          +     +K L+AR+TG LP  +   F +P+                         IA+ +  + RY+S S+IAL   GP +DT+ D    + Y+ Q  EG   +R +S VAA         P R   +Y + ++LFL TV   + +   +   L RQ++ + Q     D+S   A+  C   +    AC    +  + M   YP I+++ C ++ T
Sbjct:  131 QRNCAWQAYITGKQYNVAYPDLQAIYQVLVMLKTTEKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEIEV---DDPENT---------------------------------------------RNPFAEDSDR-----------------------------------------PIGTYTINVTPRGDQGLKNELSLCPES---MTDRQC--RSVNAVMLMRFYTSDP--DRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDD---RSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPF-----APPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLLAVA-----WQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPK-------------------------IANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAAED-------PERTCGLYNASQELFLSTVLDGKLQD--YWGILDRQLIPKTQRTRLPDRSNGYARLQCADAS-ALDACVDPDYLKNVMEDYYPRIQWYTCDQDGT 571          
BLAST of NO09G03520 vs. NCBI_GenBank
Match: EWM22223.1 (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana])

HSP 1 Score: 121.7 bits (304), Expect = 1.200e-23
Identity = 148/576 (25.69%), Postives = 210/576 (36.46%), Query Frame = 0
Query:  112 QLGCAWSAAVTAATYNIAFPDLNCVYQVLLYWGVTG-KTTLRIDGLFPHVRYFSFQSYDLQSGTPIASLIDYEIKALKGINPFNTEPLRRGKWDASRASGRQGQLGEGWDNDNYEVARPYDKAGYKRVRDRNYAQAERGRDRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSYQIHVTDDGNHGFPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEPGEDAFHHNNQEDYNRTNATSRLWGYVPRPEVSVRYGAWVNEWTGNTMERYKILESCHDDKSTVVKSFLDWKIPQIQGDWSGQSALDNLDDNFVVYTPSSSSRALFANADASYLFATARNNRSVSAINQGSGSQRKELVARITGRLPTVAHGFMEPQTLYDDKSDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGPVIDTIMD---VVMEQKYQGQEG-WDL--DRQFSVVAAPGARLLDRCPPRIYRSDRDLFLKTVQPEEREPPAHLAFLYRQILSQWQTRG---RLDKSIARAKHDCLGRNDGGHACKLRSFFVDQMGQQYPSIKYFYC 678
            +  CAW A+V    +NIAFPD   VY VL    + G    +RI+G +P VRYFS+QSYD +S  P+AS+ DYEIK+++G+NPF T     G                             DK                                                             G YQ+HVT +G+ G+PNEL   +S          G+    A V++R+Y  +          ++  ++T+    +WG V  P V  +     N  +G     Y  L+ C  + + +   F    I  I   +S   A +N         P+ +SR  F +                       G  +  LVA ITG LP    G   P                          +AD     ARY+SLST  L   GPV+ T+ D   V    +Y G E  W+L   RQ+ +VAA       RC    + +   +FL T     R   ++ A + R+ILSQ    G      +SI   K  C      G  C+  SF    M   YP + Y+ C
Sbjct:   41 EFNCAWQASV-GLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLG-----------------------------DK-------------------------------------------------------------GKYQVHVTLNGDQGYPNELPTIAS----------GSNATGAFVLLRVYAYD----------KQSPDKTD----IWGAVAPPVVKYKL---FNPSSGQGGLWY-TLDQCTPNNTKIASQF----ISTIATGYSRVLATENKAG--ANPCPTWNSRDQFLD----------------------GGGVQGNLVAVITGTLPPSPGGLWTPP------------------------FVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCG---HLTRDAMFLSTWGQTAR--VSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 440          
BLAST of NO09G03520 vs. NCBI_GenBank
Match: EWM30096.1 (hypothetical protein Naga_100193g4 [Nannochloropsis gaditana])

HSP 1 Score: 114.0 bits (284), Expect = 2.600e-21
Identity = 108/401 (26.93%), Postives = 181/401 (45.14%), Query Frame = 0
Query:  294 GSYQIHVTDDGNHGFPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEPGEDAFHHNNQEDYNRTNATSRLWGYVPRPEVSVR-YGAWVNEWTGNTMERYKILESCHDDKSTVVKSFLD----WKIPQIQGDWSGQSALDNLDDNFVVYTPSSSSRA-LFANADASYLFATARNNRSVSAINQGSGSQRKELVARITGRLPTVAHG-FMEPQTLYDDKSDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGPVIDTIMDVVMEQKYQGQ--EGWDLDRQFSVVAAPGARLLDRCPPR---IYRSDRDLFLKTVQPEEREPPAHLAFLYRQILSQWQTRGRLDKSIARAKHDCLGRNDGGHACKLRSFFVDQMGQQYPSIKYFYCWENVT 683
            G+Y I+VT  G+ G  NEL+    S      RQC  +   A+++MR YT++P  D    +++ D   +    RL+GY   P V  R + +W ++    + +R+++  +C   +ST V S +       IP             N ++NFV+Y    ++ A ++ N DA+YL A A          +     +K L+AR+TG LP  +   F +P+                         IA+ +  + RY+S S+IAL   GP +DT+ D    + Y+ Q  EG   +R +S VAA         P R   +Y + ++LFL TV   + +   +   L RQ++ + Q     D+S   A+  C   +    AC    +  + M   YP I+++ C ++ T
Sbjct:   66 GTYTINVTPRGDQGLKNELSLCPES---MTDRQC--RSVNAVMLMRFYTSDP--DRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDD---RSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPF-----APPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLLAVA-----WQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPK-------------------------IANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAAED-------PERTCGLYNASQELFLSTVLDGKLQD--YWGILDRQLIPKTQRTRLPDRSNGYARLQCADAS-ALDACVDPDYLKNVMEDYYPRIQWYTCDQDGT 411          
BLAST of NO09G03520 vs. NCBI_GenBank
Match: EWM26805.1 (protein of unknown function DUF1214 [Nannochloropsis gaditana])

HSP 1 Score: 112.8 bits (281), Expect = 5.800e-21
Identity = 138/593 (23.27%), Postives = 218/593 (36.76%), Query Frame = 0
Query:  115 CAWSAAVTAATYNIAFPDLNCVYQVLLYWGVTGKTTLRIDGLFPHVRYFSFQSYDLQSGTPIASLIDYEIKALKGINPFNTEPLRRGKWDASRASGRQGQLGEGWDNDNYEVARPYDKAGYKRVRDRNYAQAERGRDRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSYQIHVTDDGNHGFPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEPGEDAFHHNNQEDYNRTNATS-RLWGYVPRPEVSVRYGAWVNEWTGNTMERYKILESCHDDKSTVVKSFLDWKIPQ--IQGDWSGQS---ALDNLDDNFVVYT--PSSSSRALFANADASYLFATARNNRSVSAINQGSGSQRKELVARITGRLPTVAHGFMEPQTLYDDKSDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGPVIDTIMDVVMEQKY---QGQEGWD--LDRQFSVVAAPGARLLDRCPPRIYRS---DRDLFLKTVQPEEREPPAHLAFLYRQILSQWQ--------TRGRLDK-----SIARAKHDCLGRNDGGHACKLRSF-FVDQMGQQYPSIKYFYC 678
            CAW+A+    T N+ FPD   VY ++++          I+G FP  RYFS Q+YD ++ +PIA L D E+   +G+N F                 R+  L                     ++RD                                                     G ++I ++ DGN GFPNEL  +  +   +             V+MR+Y  +P              +TNA     WGY   P +S+R    +   T +  + +K +  C D  + ++   +   +    IQ ++   S   +++N+ D F++ +   +SSSRA F NAD  YL A A N+R     N        +L+A +   LP+  +   +                         R I   E+Y+ RY SLS   L+  GPV+ T  D  +   Y    G E W+    R  S+V A     LDRC      S     D   +    E   PP   + +YR+++ Q Q        + G  ++     SI  A+    G N  G  C    +     M + YP + ++ C
Sbjct:  222 CAWTASADYQTANLFFPDAQSVYHLMVFPNFGPSDLAMIEGEFPDSRYFSVQTYD-ENFSPIAGLKDLEVVPSEGVNSF----------------ARKSPL---------------------QIRD-----------------------------------------------------GRFKIVLSKDGNRGFPNELPINVGNFSST---------TTGYVMMRMYGVDP------------LAKTNANKLAKWGYKDPPTISLRTAGSLTPTTWD--QGWKKMPLCPDTNAEIITKAVTTAVNSRLIQMNFKEDSVSCSIENVKDGFMLMSRERASSSRAPFVNADGGYLMACA-NSRPEYIKN-------NDLIAVVNTFLPSTPYSKFKA------------------------RFIGSPETYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQRNVSMVVASNQAALDRCKVDTSESLILTLDDLEEQASGEPTSPPEWWSIVYRELIPQSQIINGTNAASYGMKEQDIYKTSIQDAREIMCGEN--GDTCDRNPYRAASIMKEHYPRVSWYTC 666          
BLAST of NO09G03520 vs. NCBI_GenBank
Match: XP_005854425.1 (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >EKU21938.1 hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 108.6 bits (270), Expect = 1.100e-19
Identity = 140/576 (24.31%), Postives = 195/576 (33.85%), Query Frame = 0
Query:  112 QLGCAWSAAVTAATYNIAFPDLNCVYQVLLYWGVTG-KTTLRIDGLFPHVRYFSFQSYDLQSGTPIASLIDYEIKALKGINPFNTEPLRRGKWDASRASGRQGQLGEGWDNDNYEVARPYDKAGYKRVRDRNYAQAERGRDRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSYQIHVTDDGNHGFPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEPGEDAFHHNNQEDYNRTNATSRLWGYVPRPEVSVRYGAWVNEWTGNTMERYKILESCHDDKSTVVKSFLDWKIPQIQGDWSGQSALDNLDDNFVVYTPSSSSRALFANADASYLFATARNNRSVSAINQGSGSQRKELVARITGRLPTVAHGFMEPQTLYDDKSDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGPVIDTIMD---VVMEQKYQGQEG-WDL--DRQFSVVAAPGARLLDRCPPRIYRSDRDLFLKTVQPEEREPPAHLAFLYRQILSQWQTRG---RLDKSIARAKHDCLGRNDGGHACKLRSFFVDQMGQQYPSIKYFYC 678
            +  CAW A+V    +NIAFPD   VY VL    + G    +RI+G +P VRYFS+QSYD +S  P+AS+ DYEIK+++G+NPF T     G                             DK                                                             G YQ+HVT +G+ G+PNEL   +S          G+    A V++R+Y  +          ++  ++T+    +WG V  P V                 +YK+                                          + PSS    L+   D                     G  +  LVA ITG LP    G   P                          +AD     ARY+SLST  L   GPV+ T+ D   V    +Y G E  W+L   RQ+ +VAA       RC    + +   +FL T     R   ++ A + R+ILSQ    G      +SI   K  C      G  C+  SF    M   YP + Y+ C
Sbjct:  187 EFNCAWQASV-GLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLG-----------------------------DK-------------------------------------------------------------GKYQVHVTLNGDQGYPNELPTIAS----------GSNATGAFVLLRVYAYD----------KQSPDKTD----IWGAVAPPVV-----------------KYKL------------------------------------------FNPSSGQGGLWYTLD-----------------QFDGGGVQGNLVAVITGTLPPSPGGLWTPP------------------------FVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCG---HLTRDAMFLSTWGQTAR--VSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 542          
BLAST of NO09G03520 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana])

HSP 1 Score: 71.2 bits (173), Expect = 1.900e-8
Identity = 86/351 (24.50%), Postives = 131/351 (37.32%), Query Frame = 0
Query:  294 GSYQIHVTDDGNHGFPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEP--GEDAFHHNNQEDYNRTNATSRLWGYVPRPEVSV---RYGAWVNEWTGNTMERYKILESCHDDKSTVVKSFLDWKIPQIQGDWSGQSALDNLDDNFVVYTPSSSSRALFANADASYLFATARN---NRSVSAINQGSG---------SQRKELVARITGRLPTVAHGFMEPQTLYDDKSDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGPVIDTIMDVVMEQKYQGQE-GWDLDRQFSVVAAPGARLLDRCPPRIYRSDRDLFLK-TVQPEEREPPAHLAFLYRQIL 626
            G+Y+I+V+ DG+ G+PNE+AA    +   +          AL+  RL   +P  GED             +  +R WGYV  P V +   R G W             I+  C D+                      +  ++NLD  F  + P +       NA    LF   +N    R V+  N               +K+ + RITG+LP   +G      L+DD                    +AD   Y++RYVS ++       P  +TI D  +   Y     G D DR +++VA     L  +C   +Y    D+ L+ T  P     P   A + R +L
Sbjct:  211 GTYEIYVSKDGSKGYPNEMAALRPDSTSPY----------ALLAFRLQLLDPRAGED------------RSGKNREWGYVDMPLVEILNHRNGEW------------DIIRRCSDEFQA-----------------RTEEVIENLDLTFNTWWPKNLQIGTECNATEFSLFDPEQNPIIRRGVAVRNANENYIFWCMPKEIGKKDYIIRITGKLPRTPYG------LFDDIR------------------VADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDRMYNLVATSDVNLAKKC--GLYNRAEDVLLQLTRSPTFTHLPHVPAIVMRHLL 484          
BLAST of NO09G03520 vs. NCBI_GenBank
Match: EWM25888.1 (hypothetical protein Naga_100054g2 [Nannochloropsis gaditana])

HSP 1 Score: 69.7 bits (169), Expect = 5.600e-8
Identity = 129/591 (21.83%), Postives = 184/591 (31.13%), Query Frame = 0
Query:  115 CAWSAAVTAATYNIAFPDLNCVYQVLLYWGVTGKTTLRIDGLFPHVRYFSFQSYDLQSGTPIASLIDYEIKALKGINPFNTEPLRRGKWDASRASGRQGQLGEGWDNDNYEVARPYDKAGYKRVRDRNYAQAERGRDRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSYQIHVTDDGNHGFPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEPGEDAFHHNNQEDYNR--------TNATSRLWGYVPRPEVSVRYGAWVNEWTGNTMERYKILESC-HDDKSTVVKSFLDWKIPQIQGDWSGQSALDNLDDNFVVYTPSSSSRALFANADASYLFA-------------------------------------------------TARNNRSVSAINQGSGSQR-----------KELVARITGRLPTVAHGFMEPQTLYDDKSDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGPVIDTIMDVVMEQKYQGQEG--WDLDRQFSV-VAAPGARLLDRCP-PRIYRSDRDLFLKTVQPEEREPPAHLAFLYRQILSQWQTRG 633
            CAW      A++N+AFPD   +Y V L +   G+         P+ RYFSFQSY +      ASL D +      I P    P       A+ A  +Q                                                                                 G Y++ VT  G+HG  NEL A +      +           ++  R+Y    G         +D              T + WG+   P V+V+    ++   G    +++ L  C +  K  +V  + D   P I           NL  NF + +P    +  FAN DA YLF+                                                  AR+  S     +G G +R           +EL AR+TGRLP  A+   EP                          IA+   Y+ RYVSLS++          T+ D  + + Y  + G  W  DR F + +  P   L  R   P I R ++ LFL   +    E       LYRQILSQ Q  G
Sbjct:   48 CAWRFVSNFASWNVAFPDSTSIYHVSLMYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVD------IIPSGNGPNCYTNLTAAMAGAKQ---------------------------------------------------------------------------------GGYEVVVTSHGDHGHANELRALADDRASGYF----------ILFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKR---LSRRVGG--GKFETLPLCGYRRKHGIV--YNDVTPPVIA---CPSVRAPNLPFNFFLPSPDYIKQK-FANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPP------------------------FIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVG 506          
The following BLAST results are available for this feature:
BLAST of NO09G03520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 7
Match NameE-valueIdentityDescription
XP_005855631.13.600e-3125.64hypothetical protein NGA_0673800 [Nannochloropsis ... [more]
EWM22223.11.200e-2325.69hypothetical protein Naga_100312g6 [Nannochloropsi... [more]
EWM30096.12.600e-2126.93hypothetical protein Naga_100193g4 [Nannochloropsi... [more]
EWM26805.15.800e-2123.27protein of unknown function DUF1214 [Nannochlorops... [more]
XP_005854425.11.100e-1924.31hypothetical protein NGA_0235800 [Nannochloropsis ... [more]
EWM21339.11.900e-824.50hypothetical protein Naga_100075g21 [Nannochlorops... [more]
EWM25888.15.600e-821.83hypothetical protein Naga_100054g2 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR076ncniR076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010898NSK010898Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03520.1NO09G03520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611084gene_10339Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03520.1NO09G03520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03520 ID=NO09G03520|Name=NO09G03520|organism=Nannochloropsis oceanica|type=gene|length=2981bp
ATGGGTCACACATTGTGgtaaatgcactcctgttcccaatgcactacctc
cataacgtgcatttactgtgacactcacttgttgcataattttgcagTCG
TTTCCTTGCCTTTGCGGCGTGCCTCATCCTGACGGACCTTCTTGCCGCTG
CTTCTGCCGCCCCTACGACCACGCATGATGCTGTGGAGCAGTCCATCATC
CACCATGTGCGCCAAGCTCTGGGCCTCATGAATGGCACCACGCCATTCAA
GTCCAGTATGTTGCGTGGCAGTAAGAGCAGCACGACAGACCGAAACTTGG
CAGCCCTCGGCCCCTGGAACATATTTCCCTTCCCGGCGGTCCCAGTGTCC
ATGCGAGGTGGCGCCGGCAATAGCGGACCTCTTCCTCCCACGCCCAAGAA
AATGAAAGAAACTCAGTTGGGTTGTGCCTGGAGTGCCGCCGTTACAGCTG
CTACTTACAACATCGCCTTCCCCGATTTGAACTGCGTATACCAGGTTCTG
CTCTACTGGGGCGTGACGGGCAAGACCACTTTGCGGATCGACGGACTATT
TCCCCATGTGCGCTACTTTTCCTTTCAGAGCTATGACTTGCAGAGTGGAA
CCCCCATTGCTTCACTCATCGACTACGAGATAAAGGCTTTGAAAGGTATC
AACCCGTTCAACACCGAGCCGTTGAGACGGGGGAAGTGGGATGCCAGCCG
TGCCAGTGGCAGGCAGGGACAACTCGGCGAGGGATGGGACAACGATAACT
ACGAAGTGGCTAGACCCTATGATAAAGCTGGCTACAAGAGGGTAAGGGAT
AGAAACTATGCGCAAGCGGAGCGCGGTCGGGACAGAAGGGGAGGCAAATA
CAGCGACGACGACACCAAGGACTCCTCTTCGTCATGGGAGACAGCGAGCA
ATGATGAAGATACATCAACTACTGAGGCTTCTTCCTCGAAGACTACTTCA
TCTAGCTACGGTAGCTACCAAATCCATGTTACCGACGATGGTAACCATGG
GTTTCCGAACGAACTCGCAGCGAGTAGTAGCAGTGCTGGACGTTCGTTTC
ACCGGCAGTGCGGAGCAAAAGGCTGCGTGGCCTTGGTTATCATGCGACTC
TATACAGCAGAACCAGGCGAGGATGCTTTTCATCACAACAACCAAGAGGA
TTATAATCGTACCAATGCAACTAGTCGACTTTGGGGCTATGTACCGCGGC
CTGAAGTCAGCGTCCGCTACGGTGCATGGGTGAATGAGTGGACGGGCAAC
ACGATGGAACGCTACAAAATCCTCGAATCATGTCATGATGATAAGTCCAC
CGTAGTCAAGTCGTTCCTAGACTGGAAGATACCACAGATCCAGGGCGATT
GGAGTGGACAATCAGCGCTCGACAACTTGGACGACAATTTTGTGGTATAC
ACCCCCAGCAGCTCTAGCCGGGCATTGTTTGCCAATGCCGACGCCAGCTA
CTTGTTTGCGACTGCCCGGAATAATCGCAGTGTCTCGGCGATAAATCAAG
GTAGCGGGTCTCAACGAAAGGAGCTGGTGGCGCGCATTACTGGCCGACTT
CCGACCGTGGCGCACGGTTTTATGGAGCCGCAGACTTTGTATGATGACAA
GAGCGATGAAGACTTTCATGACATTGATAAAAATAGAAAATTGCAGCCGC
ATCGTATAATCGCGGACTTAGAAAGCTACGAGGCCCGATATGTGTCGTTG
AGCACGATTGCTCTGAAGGGAGCAGGACCTGTAATTGACACGATAATGGA
TGTCGTTATGGAGCAGAAATACCAGGGGCAAGAGGGCTGGGACCTCGATC
GGCAATTCTCTGTCGTCGCCGCGCCCGGCGCACGCCTTTTAGATCGCTGT
CCTCCCCGCATCTATCGATCGGATCGCGACCTGTTCCTCAAGACAGTCCA
ACCGGAAGAAAGAGAACCGCCCGCCCATTTGGCATTCTTGTACCGACAGA
TTCTGTCGCAGTGGCAAACGCGGGGCCGTTTGGACAAATCCATCGCGCGA
GCGAAGCACGACTGTCTAGGACGTAACGATGGCGGCCATGCATGCAAACT
CCGTTCCTTTTTTGTCGATCAGATGGGTCAGCAATATCCAAGCATCAAAT
ATTTCTATTGTTGGGAAAATGTGACACGTGGATGCAGCTGCGAGGATTCA
ACAGGGAAAATGGTTGGGTGGGGGAATGAGAACGATGCAGATGATGTCGA
CGACGATTTGTGGAGCTTTCCTCACCATCACCACCATAACCACAACCACA
ACCAATATCTTTTCGACGATAATGGTGAGAAATTGGAGCATAACCATCTG
GACTTTATGCAAGGCAACAGTGAGAAAAAGGCAAACAATATCAGCAGTGG
TGGCCTCGTAACGGAGATCGGCAACAAAACCGTTGTGCCCTGGGACCCAG
TCATACCCACAGCGCTTATTACGCCAGTAGCATCTTTGGAGCATATGAAT
GAATCTATAGCACCAATGCAGCCCGTCGCATCCGTGAAGTCAGTCACAGC
TGCTGTGCCCAAGATGCTGGCAGTGCCCATGAAGACCGAGACTCCACTGT
CGCCCATGATGGACACGCCAGTGGACCCAGTCATAAACGAAAGTGTCTCT
GTCTTTGTCATACCGGATCCTTCAATGGCCCTCAATGTTTCGAACCTATC
GGGTGGCGTGCATCCTGATGCCTGGAATCAGTCACAGGCATATTACTACT
ACATGCAACATCAGAAAGACAGTAATCCTCAAGCCATCTTCGACGACGAC
AGAAAGGAAAGCACGCTTCTTGTCGCCCAAAATAAAAACCAAAAAGAGAG
CAAGCTTCTTGTTGCTGCCGATGATTTGATCAGAGAGCGGCAGCATGGGG
AGCAGAAGCAGCTGCAAGAGCATCACGAACAGGGGCAAGAAATGCAGCAC
GGCCTTGAAGAGCAGCAGTACCATGTGAAAGAGCCGCTACAAGTAAACGA
GACAAAGTCGAACGAAGGCAACAAAATTTAA
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protein sequence of NO09G03520.1

>NO09G03520.1-protein ID=NO09G03520.1-protein|Name=NO09G03520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=967bp
MGHTLCRFLAFAACLILTDLLAAASAAPTTTHDAVEQSIIHHVRQALGLM
NGTTPFKSSMLRGSKSSTTDRNLAALGPWNIFPFPAVPVSMRGGAGNSGP
LPPTPKKMKETQLGCAWSAAVTAATYNIAFPDLNCVYQVLLYWGVTGKTT
LRIDGLFPHVRYFSFQSYDLQSGTPIASLIDYEIKALKGINPFNTEPLRR
GKWDASRASGRQGQLGEGWDNDNYEVARPYDKAGYKRVRDRNYAQAERGR
DRRGGKYSDDDTKDSSSSWETASNDEDTSTTEASSSKTTSSSYGSYQIHV
TDDGNHGFPNELAASSSSAGRSFHRQCGAKGCVALVIMRLYTAEPGEDAF
HHNNQEDYNRTNATSRLWGYVPRPEVSVRYGAWVNEWTGNTMERYKILES
CHDDKSTVVKSFLDWKIPQIQGDWSGQSALDNLDDNFVVYTPSSSSRALF
ANADASYLFATARNNRSVSAINQGSGSQRKELVARITGRLPTVAHGFMEP
QTLYDDKSDEDFHDIDKNRKLQPHRIIADLESYEARYVSLSTIALKGAGP
VIDTIMDVVMEQKYQGQEGWDLDRQFSVVAAPGARLLDRCPPRIYRSDRD
LFLKTVQPEEREPPAHLAFLYRQILSQWQTRGRLDKSIARAKHDCLGRND
GGHACKLRSFFVDQMGQQYPSIKYFYCWENVTRGCSCEDSTGKMVGWGNE
NDADDVDDDLWSFPHHHHHNHNHNQYLFDDNGEKLEHNHLDFMQGNSEKK
ANNISSGGLVTEIGNKTVVPWDPVIPTALITPVASLEHMNESIAPMQPVA
SVKSVTAAVPKMLAVPMKTETPLSPMMDTPVDPVINESVSVFVIPDPSMA
LNVSNLSGGVHPDAWNQSQAYYYYMQHQKDSNPQAIFDDDRKESTLLVAQ
NKNQKESKLLVAADDLIRERQHGEQKQLQEHHEQGQEMQHGLEEQQYHVK
EPLQVNETKSNEGNKI*
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Synonyms
Publications