jgi.p|Nanoce1779_2|603255, gene_8588 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|603255
Unique Namegene_8588
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_26:283015..285031 -

Link to JBrowse

Properties
Property NameValue
TranscriptId603341
ProteinId603255
Product nameWD40-repeat-containing domain protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_26supercontigscaffold_26:283015..285031 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0051438regulation of ubiquitin-protein transferase activity
GO:0051443positive regulation of ubiquitin-protein transferase activity
GO:0051444negative regulation of ubiquitin-protein transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL043ncniL043Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01030NO25G01030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603255mRNA_8588-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603255mRNA_8588Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|603255

>mRNA_8588-protein ID=mRNA_8588-protein|Name=jgi.p|Nanoce1779_2|603255|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNG
HSGSITDMSVSWNSKRLVTASGDCQVKLWDVQTGEELLTYTHSGPVRGAQ
WAEGGDRFATVCDPFGPHNAKVQVFYAPEDADQESLSTASEVLIEIRPRE
ERPTKVYWSQFNEDLIVAYESGWVRKYDPKTGEERQGEGASAKLHDEKIN
MINWDANKVCFITASNDHRACLVDAKTLEILRVYQTDRPVNGAVISPIKD
HVLLGGGQDAQSVTTTRGQMGKFETRFFHSIYEEEFGRVKGHFGPITAVD
ISPDGLAFVSGSFDGYVRLHFFDDDYLFMKDEVPEEY*
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Synonyms
Publications