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Properties
| Property Name | Value |
|---|
| TranscriptId | 603341 |
| Track | FilteredModels2 |
| ProteinId | 603255 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:283015..285031 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8588 ID=mRNA_8588|Name=jgi.p|Nanoce1779_2|603255|organism=Nannochloropsis oceanica|type=mRNA|length=1329bp
ACAGACACACTACCACACGCAAGTACAGTAGCAGGAGGCAGCCACAACCA
CAGGAGGCTGCCACAGCAGTAGTTGTAGGAGCGTGCTCCACCACCAAACA
CAGCAAAGATGCGCGTCATGGTGATGAAAGGCCACGAGCGGAACATTACG
CGCGTGCTCTTCAACCGGGATGGGGACTTACTTTTCTCAGCAGCCAGCGA
CAAAACCCCCACGGTCTGGGACACAGAGACGGGCGAGCGCCTAGGCACCT
ACAACGGCCACTCCGGCTCCATCACTGATATGTCCGTCTCGTGGAACAGC
AAGCGCCTCGTCACGGCTTCTGGTGACTGCCAAGTCAAGCTGTGGGACGT
TCAAACAGGAGAAGAGCTCCTGACTTACACCCATTCCGGGCCTGTGCGCG
GGGCGCAGTGGGCCGAGGGAGGGGACCGATTCGCGACAGTCTGTGACCCT
TTTGGACCTCATAATGCCAAGGTGCAGGTATTCTATGCCCCTGAGGACGC
CGACCAGGAGAGTTTGAGCACGGCCTCGGAGGTGCTGATTGAGATTAGAC
CACGGGAGGAGAGGCCGACGAAGGTGTACTGGTCGCAGTTCAACGAGGAT
CTCATCGTGGCCTATGAGAGTGGGTGGGTTCGGAAATATGACCCCAAGAC
TGGGGAGGAACGGCAAGGAGAAGGGGCAAGCGCCAAGCTGCATGACGAGA
AGATCAACATGATTAATTGGGATGCGAATAAAGTGTGTTTCATCACAGCC
TCCAATGACCACCGTGCATGTCTGGTGGACGCCAAGACGTTAGAAATCCT
ACGAGTGTACCAAACGGACCGGCCAGTCAACGGCGCCGTTATTTCCCCGA
TCAAGGACCATGTCTTGCTAGGGGGAGGACAGGATGCCCAGAGCGTCACC
ACCACTCGCGGTCAAATGGGGAAGTTCGAAACACGGTTTTTCCATTCAAT
CTACGAGGAGGAGTTTGGGAGGGTGAAGGGACATTTCGGCCCCATTACCG
CGGTCGATATCAGTCCAGATGGTCTGGCGTTCGTGAGTGGGTCGTTTGAT
GGCTATGTCCGCTTGCATTTCTTTGACGATGATTACTTGTTTATGAAGGA
TGAGGTCCCTGAAGAGTATTAGAAGGTCAGGCAGGGGAAAAGAGGGAAGG
AGGAGTGCCAGAGGGTGGAAGAGATAGACAAAAAAAAACCCAACTAAATG
CTAGTTAAGTGGCCATTTCTGAGAAGGCATTATTTCATTTATTTACCTTC
TCACCTCCACGTTCCCGTCATTTCACGTGTGGCCTTGGTTAAAGCATATC
TCGTGCAAAAGAAGGGACAGCAGCAAACA back to topprotein sequence of jgi.p|Nanoce1779_2|603255 >mRNA_8588-protein ID=mRNA_8588-protein|Name=jgi.p|Nanoce1779_2|603255|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNG
HSGSITDMSVSWNSKRLVTASGDCQVKLWDVQTGEELLTYTHSGPVRGAQ
WAEGGDRFATVCDPFGPHNAKVQVFYAPEDADQESLSTASEVLIEIRPRE
ERPTKVYWSQFNEDLIVAYESGWVRKYDPKTGEERQGEGASAKLHDEKIN
MINWDANKVCFITASNDHRACLVDAKTLEILRVYQTDRPVNGAVISPIKD
HVLLGGGQDAQSVTTTRGQMGKFETRFFHSIYEEEFGRVKGHFGPITAVD
ISPDGLAFVSGSFDGYVRLHFFDDDYLFMKDEVPEEY* back to topmRNA from alignment at scaffold_26:283015..285031- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8588 ID=mRNA_8588|Name=jgi.p|Nanoce1779_2|603255|organism=Nannochloropsis oceanica|type=mRNA|length=2017bp|location=Sequence derived from alignment at scaffold_26:283015..285031- (Nannochloropsis oceanica)
ACAGACACACTACCACACGCAAGTACAGTAGCAGGAGGCAGCCACAACCA
CAGGAGGCTGCCACAGCAGTAGTTGTAGGAGCGTGCTCCACCACCAAACA
CAGCAAAGATGGTACGTTCTCACTCCCTGCTCCCCTGCCTCATCGACCTT
CTCGCTGACCCGTACGCCCGTACCAAACAAATACACAACAATGTTGACAG
CGCGTCATGGTGATGAAAGGCCACGAGCGGAACATTACGCGCGTGCTCTT
CAACCGGGATGGGGACTTACTTTTCTCAGCAGCCAGCGACAAAACCCCCA
CGGTCTGGGACACAGAGACGGGCGAGCGCCTAGGTAATGATGGACTCGAC
GTCATTCTCCTTTTCCACATATTTTCCTTCGGTCTGTTATCTGTGTTCCT
TCTTCGCAGGACAGCATTTATCGCTAGGCAGGCTTTGTGCTGTCTTTCTG
ACAACGTGACAAGTGCTCAAGATGCTCCCACCCCTCCCACCCTCCCTCCG
TCTCTTCCTCCCCAGGCACCTACAACGGCCACTCCGGCTCCATCACTGAT
ATGTCCGTCTCGTGGAACAGCAAGCGCCTCGTCACGGCTTCTGGTGACTG
CCAAGTCAAGCTGTGGGACGTTCAAACAGGAGAAGAGCTCCTGACTTACA
CCCATTCCGGGCCTGTGCGCGGGGCGCAGTGGGCCGAGGGAGGGGACCGA
TTCGCGACAGTCTGTGACCCTTTTGGACCTCATAATGCCAAGGTGCAGGT
ATTCTATGCCCCTGAGGACGCCGACCAGGAGAGTTTGAGCACGGCCTCGG
AGGTGCTGATTGAGATTAGACCACGGGAGGAGAGGCCGACGAAGGTATGT
CTATGAATAAATACATCGAAGATGTTGATTACCGACAAGTTTTCAAATAT
TTTTCACCCCCTTTCTGCATTTTCTCCCTCCGCCCCGGACTCTTTCTCTC
TCTCCTTTTTCGACTAGCATATACTGACCGCAATGAAGGGTAGAATTCAC
CGTAGCATCTGATGCACAGGACAAAGAACATGTCGAAAAACACAAACATT
CACATCTTCCTCCCCCCTTCCCTCTCTCCTTCCCTCTCTCCTTCCCTCTC
TCCTTCCCTCCCCCTGCTTACCCAGGTGTACTGGTCGCAGTTCAACGAGG
ATCTCATCGTGGCCTATGAGAGTGGGTGGGTTCGGAAATATGACCCCAAG
ACTGGGGAGGAACGGCAAGGAGAAGGGGCAAGCGCCAAGCTGCATGACGA
GAAGATCAACATGATTAATTGGGATGCGAATAAAGTAGGGAAAGATGGGG
AGGGAGGGAGGGAGGAATGGAGGGCTTTCGAAAAGAAATCGTTCTCATAG
ATTTGTACATGTGCACTACATGTTTCGACCCTCTGACGTACAATCTTCCT
TCCCCCCTCCCTCCCTTCAGGTGTGTTTCATCACAGCCTCCAATGACCAC
CGTGCATGTCTGGTGGACGCCAAGACGTTAGAAATCCTACGAGTGTACCA
AACGGACCGGCCAGTCAACGGCGCCGTTATTTCCCCGATCAAGGACCATG
TCTTGCTAGGGGGAGGACAGGATGCCCAGAGCGTCACCACCACTCGCGGT
CAAATGGGGAAGTTCGAAACACGGTTTTTCCATTCAATCTACGAGGAGGA
GTTTGGGAGGGTGAAGGGACATTTCGGCCCCATTACCGCGGTCGATATCA
GTCCAGATGGTCTGGCGTTCGTGAGTGGGTCGTTTGATGGCTATGTCCGC
TTGCATTTCTTTGACGATGATTACTTGTTTATGAAGGATGAGGTCCCTGA
AGAGTATTAGAAGGTCAGGCAGGGGAAAAGAGGGAAGGAGGAGTGCCAGA
GGGTGGAAGAGATAGACAAAAAAAAACCCAACTAAATGCTAGTTAAGTGG
CCATTTCTGAGAAGGCATTATTTCATTTATTTACCTTCTCACCTCCACGT
TCCCGTCATTTCACGTGTGGCCTTGGTTAAAGCATATCTCGTGCAAAAGA
AGGGACAGCAGCAAACA back to topCoding sequence (CDS) from alignment at scaffold_26:283015..285031- >mRNA_8588 ID=mRNA_8588|Name=jgi.p|Nanoce1779_2|603255|organism=Nannochloropsis oceanica|type=CDS|length=5070bp|location=Sequence derived from alignment at scaffold_26:283015..285031- (Nannochloropsis oceanica)
GTGTGTTTCATCACAGCCTCCAATGACCACCGTGCATGTCTGGTGGACGC
CAAGACGTTAGAAATCCTACGAGTGTACCAAACGGACCGGCCAGTCAACG
GCGCCGTTATTTCCCCGATCAAGGACCATGTCTTGCTAGGGGGAGGACAG
GATGCCCAGAGCGTCACCACCACTCGCGGTCAAATGGGGAAGTTCGAAAC
ACGGTTTTTCCATTCAATCTACGAGGAGGAGTTTGGGAGGGTGAAGGGAC
ATTTCGGCCCCATTACCGCGGTCGATATCAGTCCAGATGGTCTGGCGTTC
GTGAGTGGGTCGTTTGATGGCTATGTCCGCTTGCATTTCTTTGACGATGA
TTACTTGTTTATGAAGGATGAGGTCCCTGAAGAGTATTAGGTGTACTGGT
CGCAGTTCAACGAGGATCTCATCGTGGCCTATGAGAGTGGGTGGGTTCGG
AAATATGACCCCAAGACTGGGGAGGAACGGCAAGGAGAAGGGGCAAGCGC
CAAGCTGCATGACGAGAAGATCAACATGATTAATTGGGATGCGAATAAAG
CACCTACAACGGCCACTCCGGCTCCATCACTGATATGTCCGTCTCGTGGA
ACAGCAAGCGCCTCGTCACGGCTTCTGGTGACTGCCAAGTCAAGCTGTGG
GACGTTCAAACAGGAGAAGAGCTCCTGACTTACACCCATTCCGGGCCTGT
GCGCGGGGCGCAGTGGGCCGAGGGAGGGGACCGATTCGCGACAGTCTGTG
ACCCTTTTGGACCTCATAATGCCAAGGTGCAGGTATTCTATGCCCCTGAG
GACGCCGACCAGGAGAGTTTGAGCACGGCCTCGGAGGTGCTGATTGAGAT
TAGACCACGGGAGGAGAGGCCGACGAAGCGCGTCATGGTGATGAAAGGCC
ACGAGCGGAACATTACGCGCGTGCTCTTCAACCGGGATGGGGACTTACTT
TTCTCAGCAGCCAGCGACAAAACCCCCACGGTCTGGGACACAGAGACGGG
CGAGCGCCTAGATGGTGTGTTTCATCACAGCCTCCAATGACCACCGTGCA
TGTCTGGTGGACGCCAAGACGTTAGAAATCCTACGAGTGTACCAAACGGA
CCGGCCAGTCAACGGCGCCGTTATTTCCCCGATCAAGGACCATGTCTTGC
TAGGGGGAGGACAGGATGCCCAGAGCGTCACCACCACTCGCGGTCAAATG
GGGAAGTTCGAAACACGGTTTTTCCATTCAATCTACGAGGAGGAGTTTGG
GAGGGTGAAGGGACATTTCGGCCCCATTACCGCGGTCGATATCAGTCCAG
ATGGTCTGGCGTTCGTGAGTGGGTCGTTTGATGGCTATGTCCGCTTGCAT
TTCTTTGACGATGATTACTTGTTTATGAAGGATGAGGTCCCTGAAGAGTA
TTAGGTGTACTGGTCGCAGTTCAACGAGGATCTCATCGTGGCCTATGAGA
GTGGGTGGGTTCGGAAATATGACCCCAAGACTGGGGAGGAACGGCAAGGA
GAAGGGGCAAGCGCCAAGCTGCATGACGAGAAGATCAACATGATTAATTG
GGATGCGAATAAAGCACCTACAACGGCCACTCCGGCTCCATCACTGATAT
GTCCGTCTCGTGGAACAGCAAGCGCCTCGTCACGGCTTCTGGTGACTGCC
AAGTCAAGCTGTGGGACGTTCAAACAGGAGAAGAGCTCCTGACTTACACC
CATTCCGGGCCTGTGCGCGGGGCGCAGTGGGCCGAGGGAGGGGACCGATT
CGCGACAGTCTGTGACCCTTTTGGACCTCATAATGCCAAGGTGCAGGTAT
TCTATGCCCCTGAGGACGCCGACCAGGAGAGTTTGAGCACGGCCTCGGAG
GTGCTGATTGAGATTAGACCACGGGAGGAGAGGCCGACGAAGCGCGTCAT
GGTGATGAAAGGCCACGAGCGGAACATTACGCGCGTGCTCTTCAACCGGG
ATGGGGACTTACTTTTCTCAGCAGCCAGCGACAAAACCCCCACGGTCTGG
GACACAGAGACGGGCGAGCGCCTAGATGGTGTGTTTCATCACAGCCTCCA
ATGACCACCGTGCATGTCTGGTGGACGCCAAGACGTTAGAAATCCTACGA
GTGTACCAAACGGACCGGCCAGTCAACGGCGCCGTTATTTCCCCGATCAA
GGACCATGTCTTGCTAGGGGGAGGACAGGATGCCCAGAGCGTCACCACCA
CTCGCGGTCAAATGGGGAAGTTCGAAACACGGTTTTTCCATTCAATCTAC
GAGGAGGAGTTTGGGAGGGTGAAGGGACATTTCGGCCCCATTACCGCGGT
CGATATCAGTCCAGATGGTCTGGCGTTCGTGAGTGGGTCGTTTGATGGCT
ATGTCCGCTTGCATTTCTTTGACGATGATTACTTGTTTATGAAGGATGAG
GTCCCTGAAGAGTATTAGGTGTACTGGTCGCAGTTCAACGAGGATCTCAT
CGTGGCCTATGAGAGTGGGTGGGTTCGGAAATATGACCCCAAGACTGGGG
AGGAACGGCAAGGAGAAGGGGCAAGCGCCAAGCTGCATGACGAGAAGATC
AACATGATTAATTGGGATGCGAATAAAGCACCTACAACGGCCACTCCGGC
TCCATCACTGATATGTCCGTCTCGTGGAACAGCAAGCGCCTCGTCACGGC
TTCTGGTGACTGCCAAGTCAAGCTGTGGGACGTTCAAACAGGAGAAGAGC
TCCTGACTTACACCCATTCCGGGCCTGTGCGCGGGGCGCAGTGGGCCGAG
GGAGGGGACCGATTCGCGACAGTCTGTGACCCTTTTGGACCTCATAATGC
CAAGGTGCAGGTATTCTATGCCCCTGAGGACGCCGACCAGGAGAGTTTGA
GCACGGCCTCGGAGGTGCTGATTGAGATTAGACCACGGGAGGAGAGGCCG
ACGAAGCGCGTCATGGTGATGAAAGGCCACGAGCGGAACATTACGCGCGT
GCTCTTCAACCGGGATGGGGACTTACTTTTCTCAGCAGCCAGCGACAAAA
CCCCCACGGTCTGGGACACAGAGACGGGCGAGCGCCTAGATGGTGTGTTT
CATCACAGCCTCCAATGACCACCGTGCATGTCTGGTGGACGCCAAGACGT
TAGAAATCCTACGAGTGTACCAAACGGACCGGCCAGTCAACGGCGCCGTT
ATTTCCCCGATCAAGGACCATGTCTTGCTAGGGGGAGGACAGGATGCCCA
GAGCGTCACCACCACTCGCGGTCAAATGGGGAAGTTCGAAACACGGTTTT
TCCATTCAATCTACGAGGAGGAGTTTGGGAGGGTGAAGGGACATTTCGGC
CCCATTACCGCGGTCGATATCAGTCCAGATGGTCTGGCGTTCGTGAGTGG
GTCGTTTGATGGCTATGTCCGCTTGCATTTCTTTGACGATGATTACTTGT
TTATGAAGGATGAGGTCCCTGAAGAGTATTAGGTGTACTGGTCGCAGTTC
AACGAGGATCTCATCGTGGCCTATGAGAGTGGGTGGGTTCGGAAATATGA
CCCCAAGACTGGGGAGGAACGGCAAGGAGAAGGGGCAAGCGCCAAGCTGC
ATGACGAGAAGATCAACATGATTAATTGGGATGCGAATAAAGCACCTACA
ACGGCCACTCCGGCTCCATCACTGATATGTCCGTCTCGTGGAACAGCAAG
CGCCTCGTCACGGCTTCTGGTGACTGCCAAGTCAAGCTGTGGGACGTTCA
AACAGGAGAAGAGCTCCTGACTTACACCCATTCCGGGCCTGTGCGCGGGG
CGCAGTGGGCCGAGGGAGGGGACCGATTCGCGACAGTCTGTGACCCTTTT
GGACCTCATAATGCCAAGGTGCAGGTATTCTATGCCCCTGAGGACGCCGA
CCAGGAGAGTTTGAGCACGGCCTCGGAGGTGCTGATTGAGATTAGACCAC
GGGAGGAGAGGCCGACGAAGCGCGTCATGGTGATGAAAGGCCACGAGCGG
AACATTACGCGCGTGCTCTTCAACCGGGATGGGGACTTACTTTTCTCAGC
AGCCAGCGACAAAACCCCCACGGTCTGGGACACAGAGACGGGCGAGCGCC
TAGATGGTGTGTTTCATCACAGCCTCCAATGACCACCGTGCATGTCTGGT
GGACGCCAAGACGTTAGAAATCCTACGAGTGTACCAAACGGACCGGCCAG
TCAACGGCGCCGTTATTTCCCCGATCAAGGACCATGTCTTGCTAGGGGGA
GGACAGGATGCCCAGAGCGTCACCACCACTCGCGGTCAAATGGGGAAGTT
CGAAACACGGTTTTTCCATTCAATCTACGAGGAGGAGTTTGGGAGGGTGA
AGGGACATTTCGGCCCCATTACCGCGGTCGATATCAGTCCAGATGGTCTG
GCGTTCGTGAGTGGGTCGTTTGATGGCTATGTCCGCTTGCATTTCTTTGA
CGATGATTACTTGTTTATGAAGGATGAGGTCCCTGAAGAGTATTAGGTGT
ACTGGTCGCAGTTCAACGAGGATCTCATCGTGGCCTATGAGAGTGGGTGG
GTTCGGAAATATGACCCCAAGACTGGGGAGGAACGGCAAGGAGAAGGGGC
AAGCGCCAAGCTGCATGACGAGAAGATCAACATGATTAATTGGGATGCGA
ATAAAGCACCTACAACGGCCACTCCGGCTCCATCACTGATATGTCCGTCT
CGTGGAACAGCAAGCGCCTCGTCACGGCTTCTGGTGACTGCCAAGTCAAG
CTGTGGGACGTTCAAACAGGAGAAGAGCTCCTGACTTACACCCATTCCGG
GCCTGTGCGCGGGGCGCAGTGGGCCGAGGGAGGGGACCGATTCGCGACAG
TCTGTGACCCTTTTGGACCTCATAATGCCAAGGTGCAGGTATTCTATGCC
CCTGAGGACGCCGACCAGGAGAGTTTGAGCACGGCCTCGGAGGTGCTGAT
TGAGATTAGACCACGGGAGGAGAGGCCGACGAAGCGCGTCATGGTGATGA
AAGGCCACGAGCGGAACATTACGCGCGTGCTCTTCAACCGGGATGGGGAC
TTACTTTTCTCAGCAGCCAGCGACAAAACCCCCACGGTCTGGGACACAGA
GACGGGCGAGCGCCTAGATG back to top
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