jgi.p|Nanoce1779_2|613557, gene_10674 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|613557
Unique Namegene_10674
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_76:11479..13710 -

Link to JBrowse

Properties
Property NameValue
TranscriptId613643
ProteinId613557
Product nameatlastinlike protein putative
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_76supercontigscaffold_76:11479..13710 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0006955immune response
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL098ncniL098Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613557mRNA_10674-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613557mRNA_10674Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|613557

>mRNA_10674-protein ID=mRNA_10674-protein|Name=jgi.p|Nanoce1779_2|613557|organism=Nannochloropsis oceanica|type=polypeptide|length=595bp
MVDDDAPPSGPSTTKQSPRPLQIIRLGTAEENYSFHLEQANLDNIMAQVP
KQMKVAVVSVVGAFRTGKSFLLTFLLRYLRHGSDLDESEDWMKAAGDLRE
GNINEKVLAGEAGRSNVDSSFQWRAGKERTTTGIWMWSEPFVRRVANGED
VAVLLMDTQGMFDNETSMNLTACIFGLSTLLSSYQIYNVQNRIQEDNLQH
LALFSEYGRIALAGEAGKQLQEEQSTSRKSLEKQQQKKKGDEKEDEEKEG
KGGEEDGEEMMLPDDDEIPFQRVEFLVRDWMDFDEELPFYKLKEEMDAYL
QDVIDKGSVKDLRQTREQILSCFQKVRCFILPHPGLEVPKRGYSGEVSLI
NPFFRQLLNHYAREVFGPDLEPKRIHKRDLTAPELRQYVLSYVEMFKSGT
RFPEAQTMLEATASANNQNALQLALNKYRGEMDAYCGPRTYEYRKVDLFL
AHHRACKDAALRLFNSTATIGRKAQVKEFRGRVLGEIEDLFLRYEEANAN
RNPFRNFEYYALPLLVAAFAFILRWVADLESSCSLERRYLCRSVSNAMGH
VYVFLVTFVLILSFNRVKMFVDYVRQIMPVLLGMDRSHMHLKTA*
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Synonyms
Publications