jgi.p|Nanoce1779_2|593624, gene_6059 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|593624
Unique Namegene_6059
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:430942..432250 +

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Properties
Property NameValue
TranscriptId593710
ProteinId593624
Product nameUncharacterised protein family (UPF0081)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:430942..432250 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0042578phosphoric ester hydrolase activity
GO:0043765T/G mismatch-specific endonuclease activity
GO:0003676nucleic acid binding
GO:0016788hydrolase activity, acting on ester bonds
GO:0000150recombinase activity
GO:0003677DNA binding
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006281DNA repair
GO:0006310DNA recombination
GO:0006974cellular response to DNA damage stimulus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01770NO16G01770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593624mRNA_6059-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593624mRNA_6059Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|593624

>mRNA_6059-protein ID=mRNA_6059-protein|Name=jgi.p|Nanoce1779_2|593624|organism=Nannochloropsis oceanica|type=polypeptide|length=332bp
MASSFQCRYRRPLPLLLFLVLTLLLAILPSNAFFSFSVCRPHLHKPLLAI
DTIWSPPSSPLSSPRPTQNLSAALPDLLGSRTLGLDWGSKKIGVALTAGF
SQRPLGTINNPAGCSLNASRHRPTIDYLLGILKAEGAVRVVVGHPLFRDG
TLSPQANATKIFARLIADRALQLEIVASADVPFVYLWDERLTSQAAKVNI
KTKSFLHSSNDIDSQAACLVLEDFYQQKGYKAEIVWPDAAAVAEAATAMA
GATLASASEGNKNSNAAAPTATASPPPRASMTYDEWRRVESERYGRGTSA
ALPGAGNTAGDGGGDDAGSTKKKKKKKKKNK*
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Synonyms
Publications