Naga_100423g3, gene9624 (gene) Nannochloropsis gaditana

Overview
NameNaga_100423g3
Unique Namegene9624
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037257.1:123371..125486 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100423g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:123371..125486 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL095ngnoL095Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00400NO15G00400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9918rna9918-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9919rna9919-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9918rna9918Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9919rna9919Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9918

>rna9918-protein ID=rna9918-protein|Name=rna9918|organism=Nannochloropsis gaditana|type=polypeptide|length=381bp
MDLYHTMGFCCSIYFLKAVILPFYSRVFLRLPEYLFVQHRSGSYLYPRYF
SGCVPASCVTRSYRPLFFRFITSREISTYQLRFRLTVFPFSSFVSGQAFF
SLPLDEKEKVSVRHNKINRGYTAFEEETLDPTRQTRGDTKEGFYLGREVA
MESEEARSFPLHGPNVWPDPVKLPRWRPVMNAYFTALSSLGLRTVRLLLR
ALGLPEHHLDDTFTRPMAALRLLHYSTQASNPSEGVYAAGAHTDYGMFTF
LMTDHTPGLQVWRGGAGQEDGSWQEVPAVEGAFIVNLGDMLQRWTNDVFK
STAHRVVIQEATEEGRYSAPFFYEPNFDTLVACLPGFVKEGEVPRHVPIK
SGEYLLGKYRQTHRDFVEKADDNHTLENHAG
back to top

protein sequence of rna9919

>rna9919-protein ID=rna9919-protein|Name=rna9919|organism=Nannochloropsis gaditana|type=polypeptide|length=351bp
MSSSATSTPQVLSLHALNRAALPIVDLAAPEEAPRILYDACRDFGFFYLI
NHGVPQALIDDMLTESKAFFSLPLDEKEKVSVRHNKINRGYTAFEEETLD
PTRQTRGDTKEGFYLGREVAMESEEARSFPLHGPNVWPDPVKLPRWRPVM
NAYFTALSSLGLRTVRLLLRALGLPEHHLDDTFTRPMAALRLLHYSTQAS
NPSEGVYAAGAHTDYGMFTFLMTDHTPGLQVWRGGAGQEDGSWQEVPAVE
GAFIVNLGDMLQRWTNDVFKSTAHRVVIQEATEEGRYSAPFFYEPNFDTL
VACLPGFVKEGEVPRHVPIKSGEYLLGKYRQTHRDFVEKADDNHTLENHA
G
back to top
Synonyms
Publications