Naga_100314g3, gene9587 (gene) Nannochloropsis gaditana

Overview
NameNaga_100314g3
Unique Namegene9587
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037257.1:35316..38369 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100314g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:35316..38369 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL095ngnoL095Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9878rna9878-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9877rna9877-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9876rna9876-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9878rna9878Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9877rna9877Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9876rna9876Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9878

>rna9878-protein ID=rna9878-protein|Name=rna9878|organism=Nannochloropsis gaditana|type=polypeptide|length=604bp
MLLAQYSPNSATSPSSTGNEVTLSNPTQVPWTRPFSARPVEINNVGSHVH
VDTLLVIEDEQRANANQGLDATEDIIHADRPRKENTLESNRLGRDREVCV
QEKEFQDDELLSCQRLEGSTSMLNIGSMGKLRSHAGITLSRSSADAGGEG
LRRGRKGASLSTLKSCEFCSLKKMKCDAKLPCKACLTRNQICEYRQRKSR
LPRGKRSFSPPKIIKRAGPPYVPAAVASKPVVSSPTIGLLPQSTYSRGGS
TSALAIGLRERREGGLAASVQEFASREQFAETDPRAYFHRRVLDTEVMNR
EDHAVLTNDSAPGASLPLRDGTSVPRSDVIRTRLSGKAAIHPSPRTRQQA
RGQTENVSGHRDVNEESMELSLPRYRGGHPSLSHSHYSHQSLPAEAIDMA
DREVAALTEMTPTLMWSVKDENPPIVSGHMTGAPEEDSGGGRARPSPQRT
IGVEDGPPTSHHTFSSIAAFEPVDRSAMTPRTRQKEHQRSTKHEREESVE
RDDIWEGEQYQDQTRHLQQSNDESERSDHQRGVQWQFSNPSSAGSTSPSS
FILSFPTTQDMNENVNTFRARELITDANDNGLRVEISFLDPWRRLDSMNA
SNQG
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protein sequence of rna9877

>rna9877-protein ID=rna9877-protein|Name=rna9877|organism=Nannochloropsis gaditana|type=polypeptide|length=666bp
MDNLEYRRVVRVAHLGADNKKQEEVCEVSVVVRPLLSSNLTEQQLLQIVK
TVVSSINSGSERPATAEGSCGSATSPSSTGNEVTLSNPTQVPWTRPFSAR
PVEINNVGSHVHVDTLLVIEDEQRANANQGLDATEDIIHADRPRKENTLE
SNRLGRDREVCVQEKEFQDDELLSCQRLEGSTSMLNIGSMGKLRSHAGIT
LSRSSADAGGEGLRRGRKGASLSTLKSCEFCSLKKMKCDAKLPCKACLTR
NQICEYRQRKSRLPRGKRSFSPPKIIKRAGPPYVPAAVASKPVVSSPTIG
LLPQSTYSRGGSTSALAIGLRERREGGLAASVQEFASREQFAETDPRAYF
HRRVLDTEVMNREDHAVLTNDSAPGASLPLRDGTSVPRSDVIRTRLSGKA
AIHPSPRTRQQARGQTENVSGHRDVNEESMELSLPRYRGGHPSLSHSHYS
HQSLPAEAIDMADREVAALTEMTPTLMWSVKDENPPIVSGHMTGAPEEDS
GGGRARPSPQRTIGVEDGPPTSHHTFSSIAAFEPVDRSAMTPRTRQKEHQ
RSTKHEREESVERDDIWEGEQYQDQTRHLQQSNDESERSDHQRGVQWQFS
NPSSAGSTSPSSFILSFPTTQDMNENVNTFRARELITDANDNGLRVEISF
LDPWRRLDSMNASNQG
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protein sequence of rna9876

>rna9876-protein ID=rna9876-protein|Name=rna9876|organism=Nannochloropsis gaditana|type=polypeptide|length=660bp
MDNLEYRRVVRVAHLGADNKKQEEVCEVSVVVRPLLSSNLTEQQLLQIVK
TVVSSINSGSERPATAEGSCGSTGNEVTLSNPTQVPWTRPFSARPVEINN
VGSHVHVDTLLVIEDEQRANANQGLDATEDIIHADRPRKENTLESNRLGR
DREVCVQEKEFQDDELLSCQRLEGSTSMLNIGSMGKLRSHAGITLSRSSA
DAGGEGLRRGRKGASLSTLKSCEFCSLKKMKCDAKLPCKACLTRNQICEY
RQRKSRLPRGKRSFSPPKIIKRAGPPYVPAAVASKPVVSSPTIGLLPQST
YSRGGSTSALAIGLRERREGGLAASVQEFASREQFAETDPRAYFHRRVLD
TEVMNREDHAVLTNDSAPGASLPLRDGTSVPRSDVIRTRLSGKAAIHPSP
RTRQQARGQTENVSGHRDVNEESMELSLPRYRGGHPSLSHSHYSHQSLPA
EAIDMADREVAALTEMTPTLMWSVKDENPPIVSGHMTGAPEEDSGGGRAR
PSPQRTIGVEDGPPTSHHTFSSIAAFEPVDRSAMTPRTRQKEHQRSTKHE
REESVERDDIWEGEQYQDQTRHLQQSNDESERSDHQRGVQWQFSNPSSAG
STSPSSFILSFPTTQDMNENVNTFRARELITDANDNGLRVEISFLDPWRR
LDSMNASNQG
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Synonyms
Publications