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Properties
| Property Name | Value |
|---|
| Product | had-superfamily hydrolase |
| Orig transcript id | gnl|cribi|Naga_100491g3.7062.mrna |
| Orig protein id | gnl|cribi|Naga_100491g3.7062 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002475.1 | supercontig | CM002475.1:28064..30219 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7868 ID=rna7868|Name=rna7868|organism=Nannochloropsis gaditana|type=mRNA|length=1293bp
GTATATATATGAACCGATTTTCACACAAACATTTACTTCTCATACCTTCG
CAGGACTAGCATGCCCACACGGTAGTAGCACTTAACAGACAACATGCTAG
ACCGGTCTAAGTCACCACTCCACCCGCAGCGTTGCCTGACGTGGTGTGTA
GGGTTCGCTGCGGCGGCGGTGCTAGGAGCTCAGGCATTCGTCCCCCCTTC
TACGTCAACACCTTCCCGATTACCGTTGGGAAACTCCTGTCAGAAATGCA
ATTCTCCACTTCTGGCCTACCGTGATGCATTCAGTCATGGAGATCAACGC
TCCTCCGGCGGCAGCACCCGCAGTAGCGGAAGAAGCGAGCACGGCGATCG
GCATTACGAGAGGGAATCCATCAGTAAAGAGCTGGACGAAAGCGGTGAAA
GCACCCGCAGGAGCTCCAGTGCAAATCTACCCTTCATGAGCCAGAATCCT
GAAGACCTTGCTCCCACTGCATTACGAGAAAGTCCGTCGCTATTCAAGCA
ACGGAAGCAGGGAGGCGGACCTGAGTCCTCTTTCCCGTCCTCCCGCTCCT
TCTCCTCCTCAACGGCGCCCTTGCCGCCCCTGGAATCACTTGCTGGCGGT
GTTCCTGGCGGATATTCTACAGCAAGCAATAGAGATCCGCCCCGTCCTTC
TCCTCCTTCAAACGGACGACTGGATTCATCCTCCCTTTCTCCGGCCTCGT
TGGCCGCTGCCATCCACCAGATCGTCAGGGAGTTAACGACCCCACCCAAG
GGTCCTGGGGCGGCCTTACCCGAGGCAGCAGCAAAAAGGCTCAAGCAGAA
AAAGCTCATGGAGAAGGAGCTCGGAGCCCTCTTGGCAGTCGCCGAGAGAA
ACGCGGGCTACCTCTCCCCCGAGGCCGTCACCACCATCATCAACGCGCTC
TCCAAACTTCCTCCCCGGTGCGTTTCCCGGACATGAAGAGATAAGGCCAT
GCCCGATATGACTTTGATCGAGACCCCGTCGTTGTAGCGGTGGTGGATGT
CGAAGTGGTGACATAAGATGTGCGACATGACAACTGCTTAACTCGAACCA
CATTGTAACGTCCCAGACGTGACTCTCCACCCATCAATTTCTTCTCTTGT
CGTCTCCCTATGGTCCCCCTGTCCCTTTGATACCAATATCTGCAGCGGCC
TGCGCAGTGTCGTCCCTCTCTCCGCCTCGTTCCGTCCTCTGCGCGAGCAG
CAGGAGAAAAAGGAGAGCGGGGGAAGAAAGAAGAACCACGTTGCCGAAGT
GTTCGCCGTGGCGAAGGGGGAGGTGAGCAAGGGGGCACATGGT back to topprotein sequence of rna7868 >rna7868-protein ID=rna7868-protein|Name=rna7868|organism=Nannochloropsis gaditana|type=polypeptide|length=256bp
MYKNVIPPGGSASTSGSVRQGTITNKIKAIVYDLDGTLLDTESLSTEAIQ
AVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWE
RELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHED
HVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTG
VLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWGWVEDNI
TFSTIQ back to topmRNA from alignment at CM002475.1:28064..30219- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7868 ID=rna7868|Name=rna7868|organism=Nannochloropsis gaditana|type=mRNA|length=2156bp|location=Sequence derived from alignment at CM002475.1:28064..30219- (Nannochloropsis gaditana)
AGCGGGGACAGACCGCCGTACACCTGCACAAATCCACTGCTCATTCCATT
CGACTAGGTGACTCGTCCTGAAAACGTAGACGTGGGCCGCAACGTTCGTA
AAGACGCGGTGAGTGACCGACTTTTGCCCGCCCGGGGTCTTCTCTTGCTT
GGCGCCAGAAGCCAGCAAGCGAGAGCAGGCGCACACGTACACTTTACAAG
GGTTCGATAGAGTCCTCATGTACAAAAATGTTATTCCTCCGGGCGGGAGT
GCGAGCACAAGCGGAAGCGTGAGACAAGGCACGATAACAAACAAGATAAA
AGCCATCGTGTATGACCTTGATGGTACATTGCTAGACACCGAAAGCTTGT
CTACTGAGGCCATTCAAGCCGTCGTCGGGGCGTACGGCAAGACTTTCACT
TGGTACGTGTTTCCACATGGGGAAAAGGGGAAATTTTACGAGCAAATTCA
GAAAAATAATATTCGGTTCGTCTGTTATATTGCAGGGACATCAAAAAGAA
GATTCTTGGCATGCGCGGTGAGGAATGGGGCCGCGTAGTTGTCGATGGTA
CGTGTCTAGAATGAAATTTTCATCTTCATCTCCCTCCTCTGTTCTAAGGT
TCCTTGCCATTTCTCTATCAGATCTAGGTCTTAGTGATCAAATAGAGCCC
ATGATGCTCGTAAAGCAATGGGAAAGGGAACTTGAGGTTGTAACCCCGAC
AGTACAGGTACCTGACATCTCCCAACTATGAATTAACACCACCGCACATG
AAGTTATTGGTCCCCTCTCGTCGTTCTGTGTCATCGTTTTTCTCGACATT
TTATTATTATCGATCTGTGTCGCCAAAAAAAACAATTTTTACATCGGTGG
ATAGGATGTATTCTGTTTTCGTCTCGTGGCAAAGGTGTTACGCTCGACCG
CGGAAGCCGAGCAACTAGTCTTTTCTACATTGCTTCGACCCAGACTTTCT
TCTACAATAGATAGCTGCGATTATGCTCGCATGACATATTCGATACTATT
TTACTCCAGTTGTTACCAGGCGCGAGAGAGATAATTCAGTTCTTCGACTC
CAAAGGTCTTCCTCAAGCGATAGCCACGTCCTCCTCCGCCTTACTAGTAG
CGCACAAGCGCACACATCACGAAGATCACGTGTTTGGAAGAATGCGAACC
ATAGTGACCGGAGACGACCCCAAGGTGAGGCGATGATTCAAGAGGAAAAA
GACAGGGAGGGGGCTCCTAATTTATTCCACACATATCCATCGTCGGCGTC
TCCGCCTCTCTTCCGCCATACTTGCTACCCTGTATATCCCTTCGCTTCCT
TAGGTTGTCCGCGGTAAGCCTGCCCCAGACATCTACCTGGAGGCGGCTCA
ACGGTTGGGAGTGGCCCCGGAGGAGTGCTTAGTCTTCGAGGATGCGCTGA
CTGGAGTGAGTGGACGGGATGAGGGACAGCGTGCGGGTGGACAAGAACAG
GGACAACCTTTTGTTCTTGAGAGCATTTTTCCCGCCTGCCTATGTAATAT
TTGTTGTCCTCTACCCATCTCTTGCTCTCTTTAAGCTCCACGTCTGTAAT
TAGCCAATTTCTCCTTGCAATGTATTTTCTTCATTTCATAAGGTGTTGTC
GGGAAAGGCTGCCGGTATGTTTGTGGTAGCAATTCCAGATCCGCGCCTTG
ACGCGGCCTGCTTCCAGGCGCATGCACATCAGGTATGCTAGGTCGGACCG
TGTCCGCTTTATGGCCACGAGAAACGACGATGATTGCCGCAACGGTGGCC
TGCAAAGACCTTAAAGTATCTGAAGCAGGTTGTAGGATCATTAAGCATTC
ATATTCATGTTCTCGATATTCTCCTTCACTTGGATTTGCAGGTCTTGAAA
AGTTTAGATACTTTTGATCCCCGAAGCTGGGGATGGGTGGAGGACAATAT
CACGTTCTCCACGATTCAATAGTAGCGTGAAACATTCTGTCAAGAGGCAC
TGTGATTTCTCTGGAAATTTTTAAATCATGCCAAGCAGAGACAAACAGGA
GGGAAGAATAATAGAGTTGATTTTTTGTCTCTTCTCATTGCGAATACAAA
GCTGAAAGTCGGGACGACGGCAAGCAACTGTCTACCAAAGCACAATTAGG
AGTATTCTGGTTGCGAGTAACTTTCATTTGGCTGATTCTTTTTGCAAAAC
CTTTCG back to topCoding sequence (CDS) from alignment at CM002475.1:28064..30219- >rna7868 ID=rna7868|Name=rna7868|organism=Nannochloropsis gaditana|type=CDS|length=5397bp|location=Sequence derived from alignment at CM002475.1:28064..30219- (Nannochloropsis gaditana)
GTCTTGAAAAGTTTAGATACTTTTGATCCCCGAAGCTGGGGATGGGTGGA
GGACAATATCACGTTCTCCACGATTCAATAGGTGTTGTCGGGAAAGGCTG
CCGGTATGTTTGTGGTAGCAATTCCAGATCCGCGCCTTGACGCGGCCTGC
TTCCAGGCGCATGCACATCAGGTTGTCCGCGGTAAGCCTGCCCCAGACAT
CTACCTGGAGGCGGCTCAACGGTTGGGAGTGGCCCCGGAGGAGTGCTTAG
TCTTCGAGGATGCGCTGACTGGATTGTTACCAGGCGCGAGAGAGATAATT
CAGTTCTTCGACTCCAAAGGTCTTCCTCAAGCGATAGCCACGTCCTCCTC
CGCCTTACTAGTAGCGCACAAGCGCACACATCACGAAGATCACGTGTTTG
GAAGAATGCGAACCATAGTGACCGGAGACGACCCCAAGATCTAGGTCTTA
GTGATCAAATAGAGCCCATGATGCTCGTAAAGCAATGGGAAAGGGAACTT
GAGGTTGTAACCCCGACAGTACAGGGACATCAAAAAGAAGATTCTTGGCA
TGCGCGGTGAGGAATGGGGCCGCGTAGTTGTCGATGATGTACAAAAATGT
TATTCCTCCGGGCGGGAGTGCGAGCACAAGCGGAAGCGTGAGACAAGGCA
CGATAACAAACAAGATAAAAGCCATCGTGTATGACCTTGATGGTACATTG
CTAGACACCGAAAGCTTGTCTACTGAGGCCATTCAAGCCGTCGTCGGGGC
GTACGGCAAGACTTTCACTTGGTCTTGAAAAGTTTAGATACTTTTGATCC
CCGAAGCTGGGGATGGGTGGAGGACAATATCACGTTCTCCACGATTCAAT
AGGTGTTGTCGGGAAAGGCTGCCGGTATGTTTGTGGTAGCAATTCCAGAT
CCGCGCCTTGACGCGGCCTGCTTCCAGGCGCATGCACATCAGGTTGTCCG
CGGTAAGCCTGCCCCAGACATCTACCTGGAGGCGGCTCAACGGTTGGGAG
TGGCCCCGGAGGAGTGCTTAGTCTTCGAGGATGCGCTGACTGGATTGTTA
CCAGGCGCGAGAGAGATAATTCAGTTCTTCGACTCCAAAGGTCTTCCTCA
AGCGATAGCCACGTCCTCCTCCGCCTTACTAGTAGCGCACAAGCGCACAC
ATCACGAAGATCACGTGTTTGGAAGAATGCGAACCATAGTGACCGGAGAC
GACCCCAAGATCTAGGTCTTAGTGATCAAATAGAGCCCATGATGCTCGTA
AAGCAATGGGAAAGGGAACTTGAGGTTGTAACCCCGACAGTACAGGGACA
TCAAAAAGAAGATTCTTGGCATGCGCGGTGAGGAATGGGGCCGCGTAGTT
GTCGATGATGTACAAAAATGTTATTCCTCCGGGCGGGAGTGCGAGCACAA
GCGGAAGCGTGAGACAAGGCACGATAACAAACAAGATAAAAGCCATCGTG
TATGACCTTGATGGTACATTGCTAGACACCGAAAGCTTGTCTACTGAGGC
CATTCAAGCCGTCGTCGGGGCGTACGGCAAGACTTTCACTTGGTCTTGAA
AAGTTTAGATACTTTTGATCCCCGAAGCTGGGGATGGGTGGAGGACAATA
TCACGTTCTCCACGATTCAATAGGTGTTGTCGGGAAAGGCTGCCGGTATG
TTTGTGGTAGCAATTCCAGATCCGCGCCTTGACGCGGCCTGCTTCCAGGC
GCATGCACATCAGGTTGTCCGCGGTAAGCCTGCCCCAGACATCTACCTGG
AGGCGGCTCAACGGTTGGGAGTGGCCCCGGAGGAGTGCTTAGTCTTCGAG
GATGCGCTGACTGGATTGTTACCAGGCGCGAGAGAGATAATTCAGTTCTT
CGACTCCAAAGGTCTTCCTCAAGCGATAGCCACGTCCTCCTCCGCCTTAC
TAGTAGCGCACAAGCGCACACATCACGAAGATCACGTGTTTGGAAGAATG
CGAACCATAGTGACCGGAGACGACCCCAAGATCTAGGTCTTAGTGATCAA
ATAGAGCCCATGATGCTCGTAAAGCAATGGGAAAGGGAACTTGAGGTTGT
AACCCCGACAGTACAGGGACATCAAAAAGAAGATTCTTGGCATGCGCGGT
GAGGAATGGGGCCGCGTAGTTGTCGATGATGTACAAAAATGTTATTCCTC
CGGGCGGGAGTGCGAGCACAAGCGGAAGCGTGAGACAAGGCACGATAACA
AACAAGATAAAAGCCATCGTGTATGACCTTGATGGTACATTGCTAGACAC
CGAAAGCTTGTCTACTGAGGCCATTCAAGCCGTCGTCGGGGCGTACGGCA
AGACTTTCACTTGGTCTTGAAAAGTTTAGATACTTTTGATCCCCGAAGCT
GGGGATGGGTGGAGGACAATATCACGTTCTCCACGATTCAATAGGTGTTG
TCGGGAAAGGCTGCCGGTATGTTTGTGGTAGCAATTCCAGATCCGCGCCT
TGACGCGGCCTGCTTCCAGGCGCATGCACATCAGGTTGTCCGCGGTAAGC
CTGCCCCAGACATCTACCTGGAGGCGGCTCAACGGTTGGGAGTGGCCCCG
GAGGAGTGCTTAGTCTTCGAGGATGCGCTGACTGGATTGTTACCAGGCGC
GAGAGAGATAATTCAGTTCTTCGACTCCAAAGGTCTTCCTCAAGCGATAG
CCACGTCCTCCTCCGCCTTACTAGTAGCGCACAAGCGCACACATCACGAA
GATCACGTGTTTGGAAGAATGCGAACCATAGTGACCGGAGACGACCCCAA
GATCTAGGTCTTAGTGATCAAATAGAGCCCATGATGCTCGTAAAGCAATG
GGAAAGGGAACTTGAGGTTGTAACCCCGACAGTACAGGGACATCAAAAAG
AAGATTCTTGGCATGCGCGGTGAGGAATGGGGCCGCGTAGTTGTCGATGA
TGTACAAAAATGTTATTCCTCCGGGCGGGAGTGCGAGCACAAGCGGAAGC
GTGAGACAAGGCACGATAACAAACAAGATAAAAGCCATCGTGTATGACCT
TGATGGTACATTGCTAGACACCGAAAGCTTGTCTACTGAGGCCATTCAAG
CCGTCGTCGGGGCGTACGGCAAGACTTTCACTTGGTCTTGAAAAGTTTAG
ATACTTTTGATCCCCGAAGCTGGGGATGGGTGGAGGACAATATCACGTTC
TCCACGATTCAATAGGTGTTGTCGGGAAAGGCTGCCGGTATGTTTGTGGT
AGCAATTCCAGATCCGCGCCTTGACGCGGCCTGCTTCCAGGCGCATGCAC
ATCAGGTTGTCCGCGGTAAGCCTGCCCCAGACATCTACCTGGAGGCGGCT
CAACGGTTGGGAGTGGCCCCGGAGGAGTGCTTAGTCTTCGAGGATGCGCT
GACTGGATTGTTACCAGGCGCGAGAGAGATAATTCAGTTCTTCGACTCCA
AAGGTCTTCCTCAAGCGATAGCCACGTCCTCCTCCGCCTTACTAGTAGCG
CACAAGCGCACACATCACGAAGATCACGTGTTTGGAAGAATGCGAACCAT
AGTGACCGGAGACGACCCCAAGATCTAGGTCTTAGTGATCAAATAGAGCC
CATGATGCTCGTAAAGCAATGGGAAAGGGAACTTGAGGTTGTAACCCCGA
CAGTACAGGGACATCAAAAAGAAGATTCTTGGCATGCGCGGTGAGGAATG
GGGCCGCGTAGTTGTCGATGATGTACAAAAATGTTATTCCTCCGGGCGGG
AGTGCGAGCACAAGCGGAAGCGTGAGACAAGGCACGATAACAAACAAGAT
AAAAGCCATCGTGTATGACCTTGATGGTACATTGCTAGACACCGAAAGCT
TGTCTACTGAGGCCATTCAAGCCGTCGTCGGGGCGTACGGCAAGACTTTC
ACTTGGTCTTGAAAAGTTTAGATACTTTTGATCCCCGAAGCTGGGGATGG
GTGGAGGACAATATCACGTTCTCCACGATTCAATAGGTGTTGTCGGGAAA
GGCTGCCGGTATGTTTGTGGTAGCAATTCCAGATCCGCGCCTTGACGCGG
CCTGCTTCCAGGCGCATGCACATCAGGTTGTCCGCGGTAAGCCTGCCCCA
GACATCTACCTGGAGGCGGCTCAACGGTTGGGAGTGGCCCCGGAGGAGTG
CTTAGTCTTCGAGGATGCGCTGACTGGATTGTTACCAGGCGCGAGAGAGA
TAATTCAGTTCTTCGACTCCAAAGGTCTTCCTCAAGCGATAGCCACGTCC
TCCTCCGCCTTACTAGTAGCGCACAAGCGCACACATCACGAAGATCACGT
GTTTGGAAGAATGCGAACCATAGTGACCGGAGACGACCCCAAGATCTAGG
TCTTAGTGATCAAATAGAGCCCATGATGCTCGTAAAGCAATGGGAAAGGG
AACTTGAGGTTGTAACCCCGACAGTACAGGGACATCAAAAAGAAGATTCT
TGGCATGCGCGGTGAGGAATGGGGCCGCGTAGTTGTCGATGATGTACAAA
AATGTTATTCCTCCGGGCGGGAGTGCGAGCACAAGCGGAAGCGTGAGACA
AGGCACGATAACAAACAAGATAAAAGCCATCGTGTATGACCTTGATGGTA
CATTGCTAGACACCGAAAGCTTGTCTACTGAGGCCATTCAAGCCGTCGTC
GGGGCGTACGGCAAGACTTTCACTTGGTCTTGAAAAGTTTAGATACTTTT
GATCCCCGAAGCTGGGGATGGGTGGAGGACAATATCACGTTCTCCACGAT
TCAATAGGTGTTGTCGGGAAAGGCTGCCGGTATGTTTGTGGTAGCAATTC
CAGATCCGCGCCTTGACGCGGCCTGCTTCCAGGCGCATGCACATCAGGTT
GTCCGCGGTAAGCCTGCCCCAGACATCTACCTGGAGGCGGCTCAACGGTT
GGGAGTGGCCCCGGAGGAGTGCTTAGTCTTCGAGGATGCGCTGACTGGAT
TGTTACCAGGCGCGAGAGAGATAATTCAGTTCTTCGACTCCAAAGGTCTT
CCTCAAGCGATAGCCACGTCCTCCTCCGCCTTACTAGTAGCGCACAAGCG
CACACATCACGAAGATCACGTGTTTGGAAGAATGCGAACCATAGTGACCG
GAGACGACCCCAAGATCTAGGTCTTAGTGATCAAATAGAGCCCATGATGC
TCGTAAAGCAATGGGAAAGGGAACTTGAGGTTGTAACCCCGACAGTACAG
GGACATCAAAAAGAAGATTCTTGGCATGCGCGGTGAGGAATGGGGCCGCG
TAGTTGTCGATGATGTACAAAAATGTTATTCCTCCGGGCGGGAGTGCGAG
CACAAGCGGAAGCGTGAGACAAGGCACGATAACAAACAAGATAAAAGCCA
TCGTGTATGACCTTGATGGTACATTGCTAGACACCGAAAGCTTGTCTACT
GAGGCCATTCAAGCCGTCGTCGGGGCGTACGGCAAGACTTTCACTTG back to top
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