EWM22825.1, cds7846 (CDS) Nannochloropsis gaditana

Overview
NameEWM22825.1
Unique Namecds7846
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002475.1:29818..30002 -
Alignment locationCM002475.1:29673..29734 -
Alignment locationCM002475.1:29513..29598 -
Alignment locationCM002475.1:29046..29210 -
Alignment locationCM002475.1:28815..28916 -
Alignment locationCM002475.1:28538..28627 -
Alignment locationCM002475.1:28298..28378 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22825.1
Producthad-superfamily hydrolase
Orig transcript idgnl|cribi|Naga_100491g3.7062.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002475.1supercontigCM002475.1:29818..30002 -
CM002475.1supercontigCM002475.1:29673..29734 -
CM002475.1supercontigCM002475.1:29513..29598 -
CM002475.1supercontigCM002475.1:29046..29210 -
CM002475.1supercontigCM002475.1:28815..28916 -
CM002475.1supercontigCM002475.1:28538..28627 -
CM002475.1supercontigCM002475.1:28298..28378 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD-like_dom
IPR006439HAD-SF_hydro_IA
Homology
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|585103458|gb|EWM22825.1| (had-superfamily hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
Query:    1 MYKNVIPPGGSASTSGSVRQGTITNKIKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWGWVEDNITFSTIQ 256
            MYKNVIPPGGSASTSGSVRQGTITNKIKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWGWVEDNITFSTIQ
Sbjct:    1 MYKNVIPPGGSASTSGSVRQGTITNKIKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWGWVEDNITFSTIQ 256          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|299470968|emb|CBN79952.1| (GS1-like protein [Ectocarpus siliculosus])

HSP 1 Score: 237.654 bits (605), Expect = 2.914e-75
Identity = 117/218 (53.67%), Postives = 155/218 (71.10%), Query Frame = 0
Query:   27 IKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACF-QAHAHQVLKSLDTFDPRSW 243
            I+ +V+DLDGTLLDTE LS++++Q  VG +GK FTW++K+KILG+R E W  +V+ +LGL  Q+    L  QWE  L  ++P V+   GA  + +     G+PQ IATSSS   V+ KR +HE  +F RM  +VTGDDP+V+ GKPAPDIYL AA+R+G+ P+ECL FEDAL+GV S KAAGM VVA+PDPRLD A F +A A  +L SL  +DP +W
Sbjct:    9 IRGVVFDLDGTLLDTEELSSQSLQQSVGKFGKQFTWEVKQKILGLRKESWAPIVIAELGLEGQLSWEDLGAQWEHNLHELSPQVKKCDGAETVTKRLKDMGVPQGIATSSSKAAVSIKRQNHE-GLFERMECVVTGDDPEVIEGKPAPDIYLAAARRMGIKPQECLAFEDALSGVRSAKAAGMLVVAVPDPRLDKAPFLEAGADLLLGSLGEWDPSAW 225          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|754349535|ref|XP_004346298.2| (HAD-superfamily hydrolase [Capsaspora owczarzaki ATCC 30864] >gi|765554521|gb|KJE95142.1| HAD-superfamily hydrolase [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 207.994 bits (528), Expect = 1.072e-63
Identity = 104/218 (47.71%), Postives = 144/218 (66.06%), Query Frame = 0
Query:   27 IKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWG 244
            +  +++DLDGTLLDTE LS  A+Q V+  +GKT +W++K+KILG++G +W  +VVD  GL   IEP  +V  WE   + +    Q LPGA  I       G+P AI TSS++  V  KR  H + +F R   +VTGDDP++  GKP+PDI+L AA+RLG+ PE+CLVFEDAL+G  +G AAGM  + IPD RLD   F+  A ++L SL++F P  +G
Sbjct:    6 VACVLFDLDGTLLDTEPLSDIAMQGVLDRFGKTMSWELKRKILGLKGSDWSVIVVDHFGLHGLIEPAAIVDGWETNFKQLYSRAQKLPGADRITAHLAQLGIPMAICTSSNSAAVELKRAAHPE-MFARCTLVVTGDDPELKNGKPSPDIFLLAAKRLGMRPEQCLVFEDALSGCQAGVAAGMRTIVIPDTRLDRQPFEI-ATEILTSLESFQPAVYG 221          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|567922734|ref|XP_006453373.1| (hypothetical protein CICLE_v10009343mg [Citrus clementina] >gi|568840454|ref|XP_006474182.1| PREDICTED: (DL)-glycerol-3-phosphatase 2 [Citrus sinensis] >gi|557556599|gb|ESR66613.1| hypothetical protein CICLE_v10009343mg [Citrus clementina])

HSP 1 Score: 186.037 bits (471), Expect = 4.370e-55
Identity = 94/227 (41.41%), Postives = 143/227 (63.00%), Query Frame = 0
Query:   21 GTITNKIKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAP---EECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWG 244
            G+    I  +++D+DG LLDTE   TE  + ++  Y KTF W +K K++G +  E  +V V++ G+SD++     + Q E  L+ + PT +L+PGA  +I+   +KG+P  +AT S A     K   H + +F  M  +V GDDP+V +GKP+PDI+L AA+R    P   ++ LVFEDA +GVL+ K AGM VV +PDPRLD++ + ++A Q+L SL  F+P+ WG
Sbjct:    4 GSNKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAVEAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRE-LFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQKILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSS-YHSNADQLLSSLLDFNPKDWG 228          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|641827311|gb|KDO46497.1| (hypothetical protein CISIN_1g026543mg [Citrus sinensis])

HSP 1 Score: 186.037 bits (471), Expect = 5.856e-55
Identity = 94/221 (42.53%), Postives = 141/221 (63.80%), Query Frame = 0
Query:   27 IKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAP---EECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWG 244
            I  +++D+DG LLDTE   TE  + ++  Y KTF W +K K++G +  E  +V V++ G+SD++     + Q E  L+ + PT +L+PGA  +I+   +KG+P  +AT S A     K   H + +F  M  +V GDDP+V +GKP+PDI+L AA+R    P   +E LVFEDA +GVL+ K AGM VV +PDPRLD++ + ++A Q+L SL  F+P+ WG
Sbjct:   10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRE-LFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSS-YHSNADQLLSSLLGFNPKDWG 228          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|1117337696|ref|XP_019442307.1| (PREDICTED: (DL)-glycerol-3-phosphatase 2-like [Lupinus angustifolius] >gi|1102720925|gb|OIW19426.1| hypothetical protein TanjilG_09446 [Lupinus angustifolius])

HSP 1 Score: 184.496 bits (467), Expect = 1.911e-54
Identity = 102/248 (41.13%), Postives = 147/248 (59.27%), Query Frame = 0
Query:   12 ASTSGSVRQGTITNKIKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKR-----THHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAP---EECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWGW--VEDN 249
            A++S +V   ++   I  +V+D+DG LLDTE+  T+  + ++  Y +TF W++K K++GM+  E  RV V+D G+SD +     + + E  L  + P+  L+PGA  +I+   +KG+P  +AT S      H+R     TH    +F  M  +V GDDP+V +GKP+PDI+L AA+R    P      LVFEDA +GVL+ K AGM VV +PDPRLD + F   A QVL SL  F+P  WG    EDN
Sbjct:    2 ANSSAAV---SVRKPITHVVFDMDGLLLDTENFYTQVQEIILARYNRTFDWNLKAKMMGMKAIEAARVFVEDTGISDSLSAEQFLLEREEMLRDLFPSSDLMPGASRLIRHLHAKGVPFGLATGS------HRRHFELKTHKHGDIFSLMHHVVLGDDPEVKQGKPSPDIFLAAAKRFEGGPVDSSNILVFEDAPSGVLAAKNAGMSVVMVPDPRLDKS-FHDAADQVLNSLLDFNPSEWGLPPFEDN 239          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|1210525206|dbj|GAX15965.1| (hypothetical protein FisN_22Hh185 [Fistulifera solaris])

HSP 1 Score: 184.882 bits (468), Expect = 2.281e-54
Identity = 111/240 (46.25%), Postives = 147/240 (61.25%), Query Frame = 0
Query:   22 TITNK-IKAIVYDLDGTLLDTESLSTEAIQAVV------------GAYGKTFTWDIKKKILGMRGEEWGRVVV----DDLGLSDQIEPMM--LVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRL---DAACFQAHAHQVLKSLDTFD 239
            T T+K IKA+++DLDGTLLDTE+LS +A+ AV              + G    W++KK++LG+RG EW  +V+    D   ++D   P +  L + WE +L      V+   GA E+++ F + G+P AIATSS A  VA KRT H   +F R++ IV GD P V  GKPAPDIYLEAA+++GV P ECLV EDAL+GV SGKAAG  V+AIPDPR    +   F   A  V+  L  FD
Sbjct:    2 TATDKPIKAVLFDLDGTLLDTEALSDKAMLAVFRDQLPEDLWQSYASEGYRLPWELKKQLLGLRGSEWAPIVISYARDVWKIADHNLPTVTELWQGWEEKLNEYCEEVEKCTGASELVERFAAAGIPMAIATSSRAASVAKKRTRH-GPLFDRIQVIVPGDHPLVQEGKPAPDIYLEAARQMGVDPTECLVVEDALSGVKSGKAAGCRVIAIPDPRFTTEEKQSFVQEADYVIDDLSQFD 240          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|1150710459|ref|XP_020265852.1| ((DL)-glycerol-3-phosphatase 2 [Asparagus officinalis])

HSP 1 Score: 184.496 bits (467), Expect = 2.493e-54
Identity = 91/235 (38.72%), Postives = 146/235 (62.13%), Query Frame = 0
Query:   12 ASTSGSVRQGTITNKIKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRL--GVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWG 244
            A+ + +    ++   I  +V+D+DG LLDTE   +E  + ++  +GKTF W +K K++G +  E  ++ V+++G++DQ+ P   +++ E  L+ + P  + +PG + +I    + G+P A+AT S     A K  +H + +F  M  +VTGDDP+V +GKP+PD +L AA+R    V P   LVFEDA  GV + K AGM+VV +PDP+LDA+ +Q  A +VL SL  F+P +WG
Sbjct:    2 ATAAAASLYSSVKPSITHVVFDMDGLLLDTEIFYSEVQEKILARFGKTFDWSLKPKLMGRKAIESAKIFVEEMGIADQLTPEGFLEEREGMLQHMFPDCKEMPGVKRLITHLHANGVPMAVATGSHKRHFALKTQNHGN-IFAMMHHVVTGDDPEVKKGKPSPDCFLVAARRFETNVDPSNVLVFEDAPVGVAAAKNAGMYVVMVPDPKLDAS-YQKDADEVLTSLLDFNPSNWG 234          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|798800978|ref|WP_045884564.1| (haloacid dehalogenase [Pseudomonas chlororaphis] >gi|787856479|gb|AKA25637.1| HAD family hydrolase [Pseudomonas chlororaphis])

HSP 1 Score: 183.726 bits (465), Expect = 3.118e-54
Identity = 100/218 (45.87%), Postives = 135/218 (61.93%), Query Frame = 0
Query:   27 IKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWG 244
            IKA+++D+DG LLDTE + TE  Q +   YG+TF W IK+ I+G    +  R VV+ L L    E  ++++  E  +    P    +PGA+E++Q   +  +P A+ TSSS    A K T H D  F    TIVT DDP+V   KPAPDI+L AA+RLGVAPE+CLVFED+  GV + KAAGM  +AIPDP +  A + AHA  +L+SL  F P + G
Sbjct:   11 IKAVIFDMDGLLLDTEGIYTEVTQLIADRYGRTFDWTIKQNIIGRGAADLARYVVEALDLPITPEEFLVIR--EPLMRERFPHALAMPGAQELVQHLKANKVPIAVGTSSSRQSFAQKTTRHSDW-FALFDTIVTADDPEVTAAKPAPDIFLTAARRLGVAPEDCLVFEDSPFGVTAAKAAGMTAIAIPDPAMADARY-AHADAILRSLKGFQPAACG 224          
BLAST of EWM22825.1 vs. NCBI_GenBank
Match: gi|1057204150|ref|WP_068577318.1| (MULTISPECIES: HAD family hydrolase [Pseudomonas])

HSP 1 Score: 183.726 bits (465), Expect = 3.668e-54
Identity = 98/218 (44.95%), Postives = 134/218 (61.47%), Query Frame = 0
Query:   27 IKAIVYDLDGTLLDTESLSTEAIQAVVGAYGKTFTWDIKKKILGMRGEEWGRVVVDDLGLSDQIEPMMLVKQWERELEVVTPTVQLLPGAREIIQFFDSKGLPQAIATSSSALLVAHKRTHHEDHVFGRMRTIVTGDDPKVVRGKPAPDIYLEAAQRLGVAPEECLVFEDALTGVLSGKAAGMFVVAIPDPRLDAACFQAHAHQVLKSLDTFDPRSWG 244
            IKA+++D+DG LLDTE + TE  Q +   YG+T+ W IK+ I+G    +  R +V  L L    E  ++++  E  +    P  Q +PGAR+++Q      +P A+ TSSS +  A K T H D  F    TIVT DDP+V   KPAPDI+L AA+RLGV P ECLVFED+  GV + KAAGM  +AIPDP ++   F AHA  +L+SL +F P + G
Sbjct:   11 IKAVIFDMDGLLLDTEGIYTEITQLIAERYGRTYDWSIKQNIIGRGAGDLARYIVQALDLPISAEEFLVMR--EPLMRERFPRAQAMPGARQLVQHLKEHRIPIAVGTSSSQMSFAEKTTRHGDW-FALFDTIVTADDPEVTAAKPAPDIFLTAARRLGVEPAECLVFEDSPFGVTAAKAAGMSAIAIPDPAMEDGKF-AHADAILRSLKSFQPAACG 224          
The following BLAST results are available for this feature:
BLAST of EWM22825.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103458|gb|EWM22825.1|0.000e+0100.00had-superfamily hydrolase [Nannochloropsis gaditan... [more]
gi|299470968|emb|CBN79952.1|2.914e-7553.67GS1-like protein [Ectocarpus siliculosus][more]
gi|754349535|ref|XP_004346298.2|1.072e-6347.71HAD-superfamily hydrolase [Capsaspora owczarzaki A... [more]
gi|567922734|ref|XP_006453373.1|4.370e-5541.41hypothetical protein CICLE_v10009343mg [Citrus cle... [more]
gi|641827311|gb|KDO46497.1|5.856e-5542.53hypothetical protein CISIN_1g026543mg [Citrus sine... [more]
gi|1117337696|ref|XP_019442307.1|1.911e-5441.13PREDICTED: (DL)-glycerol-3-phosphatase 2-like [Lup... [more]
gi|1210525206|dbj|GAX15965.1|2.281e-5446.25hypothetical protein FisN_22Hh185 [Fistulifera sol... [more]
gi|1150710459|ref|XP_020265852.1|2.493e-5438.72(DL)-glycerol-3-phosphatase 2 [Asparagus officinal... [more]
gi|798800978|ref|WP_045884564.1|3.118e-5445.87haloacid dehalogenase [Pseudomonas chlororaphis] >... [more]
gi|1057204150|ref|WP_068577318.1|3.668e-5444.95MULTISPECIES: HAD family hydrolase [Pseudomonas][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7868rna7868Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications