EWM22829.1, cds7843 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22829.1 vs. NCBI_GenBank
Match: gi|585103464|gb|EWM22829.1| (hypothetical protein Naga_100733g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 998.808 bits (2581), Expect = 0.000e+0 Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 0
Query: 1 GGLLSLFPRSLISPRPTRACQGGSFIRELHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQIKPITSSAPPPSSSQHEPSHMGPQHPHRQSPPRSSHGFPSNAPPTSKSYHGYPSASHAYSPQPSTVPPAYSQYQSASAPTAAPSSPPAPRPSHAIPQHPLVPGPSSRSSGATSTSAPAFESHRQKESGHRQGSHHYEGGEGSWGDRGRRDRDWEGYRGRSFAPSSDSRESSRHAPAPAPHLPPPATAAPSSTAYSTSYSQSYDPLQPQPGGSSGHQAQPQPHPTSYPPGGYSAAYPTQAYQASQSQPPPPQLTAPAAPPNPPVAPVDASVSQLMTLLGLPKSVATAVDPGTAQQMLRAYHQQQETPQQHQQQPQQQTQSLRSFSSPLPPPPPPPPPPVQSQQPQPWGLGLLGNLSDGRGQEASGRTSEENQPLGYLSSFLQQQSQQQQQVREQPQPQQSWGTWQQPSAQPQYQPAQQQPQQPQQSHYPSQQPYQAPWRR 523
GGLLSLFPRSLISPRPTRACQGGSFIRELHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQIKPITSSAPPPSSSQHEPSHMGPQHPHRQSPPRSSHGFPSNAPPTSKSYHGYPSASHAYSPQPSTVPPAYSQYQSASAPTAAPSSPPAPRPSHAIPQHPLVPGPSSRSSGATSTSAPAFESHRQKESGHRQGSHHYEGGEGSWGDRGRRDRDWEGYRGRSFAPSSDSRESSRHAPAPAPHLPPPATAAPSSTAYSTSYSQSYDPLQPQPGGSSGHQAQPQPHPTSYPPGGYSAAYPTQAYQASQSQPPPPQLTAPAAPPNPPVAPVDASVSQLMTLLGLPKSVATAVDPGTAQQMLRAYHQQQETPQQHQQQPQQQTQSLRSFSSPLPPPPPPPPPPVQSQQPQPWGLGLLGNLSDGRGQEASGRTSEENQPLGYLSSFLQQQSQQQQQVREQPQPQQSWGTWQQPSAQPQYQPAQQQPQQPQQSHYPSQQPYQAPWRR
Sbjct: 1 GGLLSLFPRSLISPRPTRACQGGSFIRELHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQIKPITSSAPPPSSSQHEPSHMGPQHPHRQSPPRSSHGFPSNAPPTSKSYHGYPSASHAYSPQPSTVPPAYSQYQSASAPTAAPSSPPAPRPSHAIPQHPLVPGPSSRSSGATSTSAPAFESHRQKESGHRQGSHHYEGGEGSWGDRGRRDRDWEGYRGRSFAPSSDSRESSRHAPAPAPHLPPPATAAPSSTAYSTSYSQSYDPLQPQPGGSSGHQAQPQPHPTSYPPGGYSAAYPTQAYQASQSQPPPPQLTAPAAPPNPPVAPVDASVSQLMTLLGLPKSVATAVDPGTAQQMLRAYHQQQETPQQHQQQPQQQTQSLRSFSSPLPPPPPPPPPPVQSQQPQPWGLGLLGNLSDGRGQEASGRTSEENQPLGYLSSFLQQQSQQQQQVREQPQPQQSWGTWQQPSAQPQYQPAQQQPQQPQQSHYPSQQPYQAPWRR 523
BLAST of EWM22829.1 vs. NCBI_GenBank
Match: gi|553186678|ref|XP_005854467.1| (kh domain protein [Nannochloropsis gaditana CCMP526] >gi|422294591|gb|EKU21891.1| kh domain protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 93.5893 bits (231), Expect = 2.289e-16 Identity = 75/172 (43.60%), Postives = 85/172 (49.42%), Query Frame = 0
Query: 21 QGGSFIRELHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQI-------------KPITSSAPPPS-SSQHEPSHMGPQHPHRQSPPRSSHGFPSNAPPTSKSYHGYPSASHAYSPQPSTVPPAYSQYQSASAPTAAPSSPPAPRPSHA 178
+GGSFIRELHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMAS+ P + I ++ PP + P + P P +PPR P+ PP S+ PTA S RP
Sbjct: 538 KGGSFIRELHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASSSPSPPPPRRPPPPSMSPRTWGRSILTANPPHGPRTAFRPMPLLPASPTTATPPRPMRTHPN--PPQSRQ------------------------------PTANTSQRQLLRPHPP 677 The following BLAST results are available for this feature:
BLAST of EWM22829.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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