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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100733g1.5911.mrna |
| Orig protein id | gnl|cribi|Naga_100733g1.5911 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002475.1 | supercontig | CM002475.1:17847..19763 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7865 ID=rna7865|Name=rna7865|organism=Nannochloropsis gaditana|type=mRNA|length=999bp
ATGTGCGATGCGGCGAAGAGCCAAAAGAAGGAAGGAGAAGAGAAGGAGAT
GATCGCGGGGGAGGAAGAGAAGGTAATGGCGGAGGAGGAACAGGAGGAGA
CGGAGGAGGAGAAAAGAGAGGAGGAGAAAAAGGAGGAGCCGGGTACTGAA
CAGGATCGGAAGGCTGAAAAAGAGGAAAGTTCCCGTCATGCCTCGTCGCG
GTGGTCCTCGAGGCCTGCCGAGGCGGAGACACCGGGCGCTAAGCGGCCTC
TGGGGGAGCCGGACTTGCGCGAGGAGCGGCGTCGGAGGCGCTTCTCGGGA
CAGGGGGAACAGGACGAGAGCTCCTACACGCTGACGATCTTGGTCCCGAA
TGAGGCCATGGGCTTGCTGATTGGGCGAGCCGGGGCCACGCGTCAGGAGA
TTGTGAGCCGCGCGGACAACGTGCGGCTGAAGGTGCAGGACTACAAGGAC
ATGGGCGAAGGCTGTTACGACAGAGGCATCACCCTGAGCGGGTCCTGGGA
GAAGGTGGCCAAGGCTCAAGTTCTCATCCTGCAGAAGCTAATTGACCGAC
GAAACAGCATCATTCGGGAGGGCAATCTGGAAGACACTCTTTTCGCCGGC
CCAGATCCTCGCGTCACGGTCAAATGGTGCATTCCGCTCGAGCTGGGCGG
TGCCCTCATCGGCAAACGGGGTGCCACCCTTGCGCACATCAGCAGCGAGT
CGGGCGCTCGCATTCGCCTCGGCCACGAGGAGGAGCTTCCTCCCAGCCGC
CATCAGAAGCGAGCAGTCTACGTAACGGGCCGGAAGGCCGAGCGAGACAA
GGCTCTGGCCCTCATTCGAGAGAAGGTGGGCGGGCACTACTTCGGCCTGC
TCGGCCAGGGCTTCAGTCCGGACGCAGTAGTGGTAAAGGTGCCGGTGCGC
GCTGTGGGGATGCTCATGGGCCCCAAAGGCGCGCGGATGCGGGAACTGCG
GGAGACGACGGGCGCTCGCGTCATGTTGGCCAAGGTAGGGGGACAGTAA back to topprotein sequence of rna7865 >rna7865-protein ID=rna7865-protein|Name=rna7865|organism=Nannochloropsis gaditana|type=polypeptide|length=523bp
GGLLSLFPRSLISPRPTRACQGGSFIRELHASGVLVKILQEETSFTRTYD
ERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQIKPITSSAPPPSSSQH
EPSHMGPQHPHRQSPPRSSHGFPSNAPPTSKSYHGYPSASHAYSPQPSTV
PPAYSQYQSASAPTAAPSSPPAPRPSHAIPQHPLVPGPSSRSSGATSTSA
PAFESHRQKESGHRQGSHHYEGGEGSWGDRGRRDRDWEGYRGRSFAPSSD
SRESSRHAPAPAPHLPPPATAAPSSTAYSTSYSQSYDPLQPQPGGSSGHQ
AQPQPHPTSYPPGGYSAAYPTQAYQASQSQPPPPQLTAPAAPPNPPVAPV
DASVSQLMTLLGLPKSVATAVDPGTAQQMLRAYHQQQETPQQHQQQPQQQ
TQSLRSFSSPLPPPPPPPPPPVQSQQPQPWGLGLLGNLSDGRGQEASGRT
SEENQPLGYLSSFLQQQSQQQQQVREQPQPQQSWGTWQQPSAQPQYQPAQ
QQPQQPQQSHYPSQQPYQAPWRR back to topmRNA from alignment at CM002475.1:17847..19763+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7865 ID=rna7865|Name=rna7865|organism=Nannochloropsis gaditana|type=mRNA|length=1917bp|location=Sequence derived from alignment at CM002475.1:17847..19763+ (Nannochloropsis gaditana)
GGGGGGTTGCTATCTCTATTTCCTCGATCTCTGATCTCACCTCGGCCCAC
GCGCGCATGCCAGGGCGGCTCCTTCATCCGGGAGCTGCACGCGTCGGGCG
TGCTGGTGAAGATCTTGCAGGAGGAGACCTCTTTCACCCGCACCTACGAC
GAGCGACCCGTGATGCTGACGGGGCCCCTGGCCACCGTGCTGGCCGTGGA
GCAGCAGCTCCTGGACCGGATGGCATCGTAAGTGGAGATGAGGAACGTAA
AAAGGCGGAAGCCTTGCCTGTCTAGTGTTCGTGCGTTGTGGTCCAGGAGA
CAGGAGATCTTGGAGTGTAAATTGACACAtctcccatcttccccccccta
gGGCCCCTCCGAAGGCGATTGAACAGATCAAgcccatcacctcctccgcc
ccgccgccctcctcctcccagcatGAGCCCTCGCACATGGGGCCGCAGCA
TCCTCACCGCCAATCCCCCCCACGGTCCTCGCACGGCTTTCCGTCCAATG
CCCCTCCTACCAGCAAGTCCTACCACGGCTacccctccgcgtcccatGCG
TACTCACCCCAACCCTCCACAGTCCCGCCAGCCTACAGCCAATACCAGTC
AGCGTCAGCTCCTACGGccgcaccctcctcgcccccagCACCCAGGCCAA
GTCACGCCATCCCGCAACATCCCCTGGTGCctggtccctcctctcggTCA
AGCGGAGCCACCAGTACGTCGGCGCCTGCGTTCGAGTCGCATAGACAAAA
AGAAAGTGGGCACAGACAGGGCAGCCACCACTACGAAGGGGGTGAAGGGA
GCTGGGGAGATCGCGGCCGGAGAGACAGGGACTGGGAGGGATATCGAGGT
CGATCGTTCGCGCCCAGCAGCGATTCGCGAGAATCTTCCCGACATGCTCC
AGCACCGGCACCTCACCTTCCACCGCCGGCGACCGCagcgccgtcctcca
ccgcgtaCTCTACCAGCTATTCTCAAAGCTATGATCCCCTTCAACCCCAG
CCCGGGGGATCGTCTGGCCACCAAGCTCAACCTCAACCACATCCCACCTC
CTACCCGCCTGGGGGATACAGCGCGGCATACCCCACCCAGGCTTATCAAG
CGTCGCAGTctcagcccccgcccccgcaaCTCACCGCCCCGGCAGCCCCT
CCGAATCCACCGGTGGCACCTGTAGACGCTTCGGTCTCCCAGCTGATGAC
CCTCTTGGGGCTTCCCAAGTCAGTCGCCACTGCCGTCGACCCAGGCACCG
CCCAACAGATGCTTCGCGCCTaccaccagcagcaggagaCGCCGCAGCAA
CATCAGCAGCAACCGCAACAGCAAACACAGTCGCTTCGGTCTTTCTcgag
ccctcttcctccgccccctcctccccccccacccccggtGCAAAGtcagc
agccgcagccgTGGGGGCTGGGCCTTCTTGGAAACTTGTCGGATGGGCGA
GGACAAGAGGCATCTGGACGCACGAGCGAAGAAAACCAACCTCTGGGAta
cctctcttctttcttgcagcagcagtcgcagcaacagcagcaggtTCGAG
AGCAGCCACAGCCGCAGCAGTCGTGGGGAACTTGGCAACAACCATCAGCG
CAACCTCAGTATCAGCCggcacagcagcagccacagcagccacagcaaTC
ACATTATCCGTCTCAACAGCCGTATCAAGCGCCCTGGCGACGATAATTTT
AATCGACTTTagcggcagaggaggataaCAGTGAAATCGATGGCTGAGGA
AGTAGGACACTAATTCTCGTTGTTTTATTGCCGTTGTATTGCCCTGTTTA
AAGAACGGTCAGGTGAAAATTTGACAAGAAACGCATCAGGAACAATCGAC
ATCCCGAAAAGGTGGTGAAAGTTGTGCGTTGGTAAACCCCAAAGACCGCA
ATTCGAGCTTGCgagac back to topCoding sequence (CDS) from alignment at CM002475.1:17847..19763+ >rna7865 ID=rna7865|Name=rna7865|organism=Nannochloropsis gaditana|type=CDS|length=3144bp|location=Sequence derived from alignment at CM002475.1:17847..19763+ (Nannochloropsis gaditana)
GGGGGGTTGCTATCTCTATTTCCTCGATCTCTGATCTCACCTCGGCCCAC
GCGCGCATGCCAGGGCGGCTCCTTCATCCGGGAGCTGCACGCGTCGGGCG
TGCTGGTGAAGATCTTGCAGGAGGAGACCTCTTTCACCCGCACCTACGAC
GAGCGACCCGTGATGCTGACGGGGCCCCTGGCCACCGTGCTGGCCGTGGA
GCAGCAGCTCCTGGACCGGATGGCATCGGCCCCTCCGAAGGCGATTGAAC
AGATCAAgcccatcacctcctccgccccgccgccctcctcctcccagcat
GAGCCCTCGCACATGGGGCCGCAGCATCCTCACCGCCAATCCCCCCCACG
GTCCTCGCACGGCTTTCCGTCCAATGCCCCTCCTACCAGCAAGTCCTACC
ACGGCTacccctccgcgtcccatGCGTACTCACCCCAACCCTCCACAGTC
CCGCCAGCCTACAGCCAATACCAGTCAGCGTCAGCTCCTACGGccgcacc
ctcctcgcccccagCACCCAGGCCAAGTCACGCCATCCCGCAACATCCCC
TGGTGCctggtccctcctctcggTCAAGCGGAGCCACCAGTACGTCGGCG
CCTGCGTTCGAGTCGCATAGACAAAAAGAAAGTGGGCACAGACAGGGCAG
CCACCACTACGAAGGGGGTGAAGGGAGCTGGGGAGATCGCGGCCGGAGAG
ACAGGGACTGGGAGGGATATCGAGGTCGATCGTTCGCGCCCAGCAGCGAT
TCGCGAGAATCTTCCCGACATGCTCCAGCACCGGCACCTCACCTTCCACC
GCCGGCGACCGCagcgccgtcctccaccgcgtaCTCTACCAGCTATTCTC
AAAGCTATGATCCCCTTCAACCCCAGCCCGGGGGATCGTCTGGCCACCAA
GCTCAACCTCAACCACATCCCACCTCCTACCCGCCTGGGGGATACAGCGC
GGCATACCCCACCCAGGCTTATCAAGCGTCGCAGTctcagcccccgcccc
cgcaaCTCACCGCCCCGGCAGCCCCTCCGAATCCACCGGTGGCACCTGTA
GACGCTTCGGTCTCCCAGCTGATGACCCTCTTGGGGCTTCCCAAGTCAGT
CGCCACTGCCGTCGACCCAGGCACCGCCCAACAGATGCTTCGCGCCTacc
accagcagcaggagaCGCCGCAGCAACATCAGCAGCAACCGCAACAGCAA
ACACAGTCGCTTCGGTCTTTCTcgagccctcttcctccgccccctcctcc
ccccccacccccggtGCAAAGtcagcagccgcagccgTGGGGGCTGGGCC
TTCTTGGAAACTTGTCGGATGGGCGAGGACAAGAGGCATCTGGACGCACG
AGCGAAGAAAACCAACCTCTGGGAtacctctcttctttcttgcagcagca
gtcgcagcaacagcagcaggtTCGAGAGCAGCCACAGCCGCAGCAGTCGT
GGGGAACTTGGCAACAACCATCAGCGCAACCTCAGTATCAGCCggcacag
cagcagccacagcagccacagcaaTCACATTATCCGTCTCAACAGCCGTA
TCAAGCGCCCTGGCGACGATAAGGGGGGTTGCTATCTCTATTTCCTCGAT
CTCTGATCTCACCTCGGCCCACGCGCGCATGCCAGGGCGGCTCCTTCATC
CGGGAGCTGCACGCGTCGGGCGTGCTGGTGAAGATCTTGCAGGAGGAGAC
CTCTTTCACCCGCACCTACGACGAGCGACCCGTGATGCTGACGGGGCCCC
TGGCCACCGTGCTGGCCGTGGAGCAGCAGCTCCTGGACCGGATGGCATCG
GCCCCTCCGAAGGCGATTGAACAGATCAAgcccatcacctcctccgcccc
gccgccctcctcctcccagcatGAGCCCTCGCACATGGGGCCGCAGCATC
CTCACCGCCAATCCCCCCCACGGTCCTCGCACGGCTTTCCGTCCAATGCC
CCTCCTACCAGCAAGTCCTACCACGGCTacccctccgcgtcccatGCGTA
CTCACCCCAACCCTCCACAGTCCCGCCAGCCTACAGCCAATACCAGTCAG
CGTCAGCTCCTACGGccgcaccctcctcgcccccagCACCCAGGCCAAGT
CACGCCATCCCGCAACATCCCCTGGTGCctggtccctcctctcggTCAAG
CGGAGCCACCAGTACGTCGGCGCCTGCGTTCGAGTCGCATAGACAAAAAG
AAAGTGGGCACAGACAGGGCAGCCACCACTACGAAGGGGGTGAAGGGAGC
TGGGGAGATCGCGGCCGGAGAGACAGGGACTGGGAGGGATATCGAGGTCG
ATCGTTCGCGCCCAGCAGCGATTCGCGAGAATCTTCCCGACATGCTCCAG
CACCGGCACCTCACCTTCCACCGCCGGCGACCGCagcgccgtcctccacc
gcgtaCTCTACCAGCTATTCTCAAAGCTATGATCCCCTTCAACCCCAGCC
CGGGGGATCGTCTGGCCACCAAGCTCAACCTCAACCACATCCCACCTCCT
ACCCGCCTGGGGGATACAGCGCGGCATACCCCACCCAGGCTTATCAAGCG
TCGCAGTctcagcccccgcccccgcaaCTCACCGCCCCGGCAGCCCCTCC
GAATCCACCGGTGGCACCTGTAGACGCTTCGGTCTCCCAGCTGATGACCC
TCTTGGGGCTTCCCAAGTCAGTCGCCACTGCCGTCGACCCAGGCACCGCC
CAACAGATGCTTCGCGCCTaccaccagcagcaggagaCGCCGCAGCAACA
TCAGCAGCAACCGCAACAGCAAACACAGTCGCTTCGGTCTTTCTcgagcc
ctcttcctccgccccctcctccccccccacccccggtGCAAAGtcagcag
ccgcagccgTGGGGGCTGGGCCTTCTTGGAAACTTGTCGGATGGGCGAGG
ACAAGAGGCATCTGGACGCACGAGCGAAGAAAACCAACCTCTGGGAtacc
tctcttctttcttgcagcagcagtcgcagcaacagcagcaggtTCGAGAG
CAGCCACAGCCGCAGCAGTCGTGGGGAACTTGGCAACAACCATCAGCGCA
ACCTCAGTATCAGCCggcacagcagcagccacagcagccacagcaaTCAC
ATTATCCGTCTCAACAGCCGTATCAAGCGCCCTGGCGACGATAA back to top
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