EWM22834.1, cds7839 (CDS) Nannochloropsis gaditana

Overview
NameEWM22834.1
Unique Namecds7839
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002475.1:4736..5314 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22834.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100632g1.1392.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002475.1supercontigCM002475.1:4736..5314 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22834.1 vs. NCBI_GenBank
Match: gi|585103471|gb|EWM22834.1| (hypothetical protein Naga_100632g1 [Nannochloropsis gaditana])

HSP 1 Score: 363.999 bits (933), Expect = 7.625e-127
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 
Query:    1 MEKGYSFGRFQKKSRETEAAMKQRWYQRVAAMEATVGRLQVKRTQRVWEGHEALLSGGGGRGRALAVAVAAGVTTAARTRAARRWRRRTEEEWMECTRIERRSFSRRSSSQRMQAGTAGSTATRTRRRRAQRVVGPLGPARGCSGKGRRWSRRGSRSRRLMWLQLLKGMGLRGLEGVRRSSRKGFLLLRDSV 192
            MEKGYSFGRFQKKSRETEAAMKQRWYQRVAAMEATVGRLQVKRTQRVWEGHEALLSGGGGRGRALAVAVAAGVTTAARTRAARRWRRRTEEEWMECTRIERRSFSRRSSSQRMQAGTAGSTATRTRRRRAQRVVGPLGPARGCSGKGRRWSRRGSRSRRLMWLQLLKGMGLRGLEGVRRSSRKGFLLLRDSV
Sbjct:    1 MEKGYSFGRFQKKSRETEAAMKQRWYQRVAAMEATVGRLQVKRTQRVWEGHEALLSGGGGRGRALAVAVAAGVTTAARTRAARRWRRRTEEEWMECTRIERRSFSRRSSSQRMQAGTAGSTATRTRRRRAQRVVGPLGPARGCSGKGRRWSRRGSRSRRLMWLQLLKGMGLRGLEGVRRSSRKGFLLLRDSV 192
The following BLAST results are available for this feature:
BLAST of EWM22834.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103471|gb|EWM22834.1|7.625e-127100.00hypothetical protein Naga_100632g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7861rna7861Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications