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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100632g1.1392.mrna |
| Orig protein id | gnl|cribi|Naga_100632g1.1392 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002475.1 | supercontig | CM002475.1:4281..5592 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7861 ID=rna7861|Name=rna7861|organism=Nannochloropsis gaditana|type=mRNA|length=2024bp
TGGAAGCGGTTCTACTGACGTGAGGGGTTGGCCTCCATGGCGTCGCAGCT
GTGTGGTCACAATGATAGAAAGCGATCGATCTCTGACGTTATTCCTGCGG
ATGCTCTTTGACGCTTTTGGCTGACTACGTGGAGCACCCAAACCAGACTT
CTGAAGTTTTCTCAGTGGAGTTGAACTCTCCTCGACCCATTTAAATTTCT
CCACGCTTTCTCCAGAGAGAGTACCTGTGCAGTCTTCACTTCTTAAATTA
TCAATACCCAGCTCATAATACTGCAAAACATGCTAATCTATGTGTTGTCC
AGCTGAATATCTATCGGCGGGAATTGTGGTCACTCTACTCAGTCGAAAGG
ATTGCGTAACTGATGGGGAGGCGTACAAACAATTTGCCATCTTCACGCGT
GACTCGTGTATCTCTTCAGTGCATCGGCTCATTGTACGACAAATGTACTT
GTTCTCATGTAGAGGTGAGGGTGTCCCTTCAACAATGCACAGCAGTGGAC
CTCTTTCTACGGCGCTTTAAGCGGCAAAAATTGAGCTGATGCAGACCAGA
CCAGTCCCATTAGTTTCACCACTCCTTTGAGAAAATTGCATGACTGACAC
CGGAATACCGGAGAATTTCATGTGTCGATCTCTTAACACCTGTAATAGTG
TCCTCAGCGACTTCAAAGGAAGGGATATACAGGAAACTCAGGAGAGGAAT
TACGGGGCGATGAGATACACAATGAACGCAAAAGGATGCAGAGCAACCCG
TATAGCCATCGCTATGGCAGTTTTGTACCTATATAGCATCGTTTTACTAA
AAGGGCGCCGCTTCATGCCTTCGAGCTCGAGTCCTCCAACACCGACCTTG
GGCCTTAGCAGTCGTCCTCGAGGCTCCTCTGCATCTCTGAGATCCTCCTA
CTCAGGTTCTCTGCGAAATTCATTCCATCGGAACTCAAGAGGAACCGAGA
GTCTTAACCATCTCATCATGGTGGCAGGGCACGCTGTCACCATAAGTGAG
TCGTTGGAAGGCGCCGAGACAGATGATGCCGTTTGGTACCTGCTTCCTTA
CCAACGAGATCAAGACCTACCGGCAACTTTTGTGTCCCATATTCGTACCG
GTGTGGAGCTGGCAAAACGAGATCCTGCTTCTCTGCTCATTTTCTCCGGC
GGACAGACGCGTGCAGAGGCTGGTCCGAGGAGCGAGGGTTCGAGCTACTA
TCGGGTGGCTGAGCATTTTGGGTGGTGGGATTCTGCATCCTCTCCGTCCG
ACGTGAAAAAGCGGGCCCTAACGGAAGACTACGCTTTGGATTCTATCGAG
AACCTCTTGTACTCGATATGTCGCTTCAAGGAGTATACTGACCATTATCC
GACACGCATTTCAGTCGTGTCTTTTGCCTTTAAGCAAAAACGCTTCCGAT
TTCATCATCGTGCCGCTTTGCGTTTTCCCGATAGTCGCTTTGCCTTTGTG
GGCGTGGACCCGCCAATAGGGGGGAAGTTCGACCATAAGAAAGCAGAAAA
AGGGGAACTTAATGAAGCTGTTAAACTTTTTGAATCCGATCCGTACGGCT
GCAACTCAAAAAAACTTCAAGAAAAACACGCAGAGCGCAATCCTTTCATG
CGAACTATGCCTTACACCTTTTCCTGCCCTGAAGTCGCTCCCCTCTTGGA
GTACTGCGAGAGTACCATTTATCCAGATCCTTTACCATGGGACTCCCATT
GATACGTGAGAATAATACCGCACCATGAAGAATGAGGCTTGCTTGCGTCA
GTCCAGGAAGAAGGGACCTAGCCAATATATGAATCGAGCACTGCAATATA
TCGCTTACTAATCTCAATGCATGGCATTGAATTGCACCTCCGCCCTTGTC
TCTGAATGTTTTTACCTGCAAGAAGTTAGGAGACCTTTGCAATTCATCCA
CCGAAAAATCCTGTTCCTCCTATTCCTTCTGCCTTTTTTTCTTTGTCGCC
GACATGATGCCTTTGTTTTTTTTTAAAGTTCAAGTGTACGATACCAAATC
AAAGAACAAGATTTTTCGAAAAAT back to topprotein sequence of rna7861 >rna7861-protein ID=rna7861-protein|Name=rna7861|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MEKGYSFGRFQKKSRETEAAMKQRWYQRVAAMEATVGRLQVKRTQRVWEG
HEALLSGGGGRGRALAVAVAAGVTTAARTRAARRWRRRTEEEWMECTRIE
RRSFSRRSSSQRMQAGTAGSTATRTRRRRAQRVVGPLGPARGCSGKGRRW
SRRGSRSRRLMWLQLLKGMGLRGLEGVRRSSRKGFLLLRDSV back to topmRNA from alignment at CM002475.1:4281..5592+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7861 ID=rna7861|Name=rna7861|organism=Nannochloropsis gaditana|type=mRNA|length=1312bp|location=Sequence derived from alignment at CM002475.1:4281..5592+ (Nannochloropsis gaditana)
ATGTCGTGCTGTTACGCATCGTAGCTGCCCAAATGGCAATAAGATACCTA
TGTTAGCTTTGACTGGTTTCGACAAATAGCACGACTTATCAAAGACCTCC
GTaacctcgctctccctgtGTTTGAAAAGGTAGTAAACCTAATGTGTCAT
TCTCCCGTCGCCGACCCTGCATCAATGTTCTGtcggccttttcccccgAT
GAGGCATCCTATGTCATCCGGAGCACCTTTTACGACGTTGGGCGGCTTGT
AGCGCCTCAAGTCTAACGAGCTCGCCAGCACAGAGACACTGGAAAGAGGT
CTAGCTGCCCCTGCGATGTATGGTGGGATGGTAGTGCGCAGCCAGGGCAA
CAGTAAGACTGCAGTCGAAGGAATGCCTACAACGTAATATAACAAGGTCA
AGACCAGATTCAATTAGATGCGACGGACAATGTGCGGCCGCGCTGCGACA
CGTGCATGGAGAAAGGCTACTCCTTCGGCAGGTTCCAGAAGAAGTCGAGG
GAGACCGAGGCGGCTATGAAGCAGCGGTGGTACCAGCgcgtggcggcgat
ggaggcgacggtGGGCCGGCTGCAGGTGAAGCGGACCCAgagggtgtggg
agggcCACGAAGCACTCTTgagtggcgggggggggaggggaagggcgctg
gcggtggcggtaGCAGCAGGAGTGACGACAGCAGCGAGAACGCGAGCagc
aaggagatggaggaggcggacggaggaggagtggatgGAATGCACGAGGA
TAGAAAGGCGTAGCTTTTCGCGTCGTTCTTCGAGCCAGAGGATGCAGGCC
GGGACGGCGGGGAGCacagcgacgaggacgcggcggcggcgggcgcaGCG
GGTGGTTGGGCCGTTGGGGCCAGCGCGGGGGTGcagcgggaagggaagga
gatggagcaggagagggagcaggagtaGGAGGCTGATGTGGCTGCAGCTG
CTGAAGGGGATGGGGCTcagggggttggagggggtgaggaggagcagtAG
GAAAGGCTTTCTGCTACTGCGAGACAGCGTATGACcctgaggaggagagg
gggatggtggagtGCGGCGGCTTCAAAAATGGGTATCATTATGAGTGCAT
TGAGGACAATAAGGGGAAGGGATCGCggaaggcggcagaggctGATGGGA
GCAGCGAGACGACGCAGTGGTCCTGCCGACGCGActccaagagcaaggca
aAGAACACGTAGTTAGGGATGAGGGAGCCAGGACAAGGAACAGGATGGAC
TATGCTTACAATATAACTTTTCTAATATATTGTGCAGATTAGTTGTTGTT
TAGACTCATTCC back to topCoding sequence (CDS) from alignment at CM002475.1:4281..5592+ >rna7861 ID=rna7861|Name=rna7861|organism=Nannochloropsis gaditana|type=CDS|length=579bp|location=Sequence derived from alignment at CM002475.1:4281..5592+ (Nannochloropsis gaditana)
ATGGAGAAAGGCTACTCCTTCGGCAGGTTCCAGAAGAAGTCGAGGGAGAC
CGAGGCGGCTATGAAGCAGCGGTGGTACCAGCgcgtggcggcgatggagg
cgacggtGGGCCGGCTGCAGGTGAAGCGGACCCAgagggtgtgggagggc
CACGAAGCACTCTTgagtggcgggggggggaggggaagggcgctggcggt
ggcggtaGCAGCAGGAGTGACGACAGCAGCGAGAACGCGAGCagcaagga
gatggaggaggcggacggaggaggagtggatgGAATGCACGAGGATAGAA
AGGCGTAGCTTTTCGCGTCGTTCTTCGAGCCAGAGGATGCAGGCCGGGAC
GGCGGGGAGCacagcgacgaggacgcggcggcggcgggcgcaGCGGGTGG
TTGGGCCGTTGGGGCCAGCGCGGGGGTGcagcgggaagggaaggagatgg
agcaggagagggagcaggagtaGGAGGCTGATGTGGCTGCAGCTGCTGAA
GGGGATGGGGCTcagggggttggagggggtgaggaggagcagtAGGAAAG
GCTTTCTGCTACTGCGAGACAGCGTATGA back to top
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