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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100695g3.10416.mrna |
| Orig protein id | gnl|cribi|Naga_100695g3.10416 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:233432..234736 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4742 ID=rna4742|Name=rna4742|organism=Nannochloropsis gaditana|type=mRNA|length=2389bp
TCGGGGATGGTTGGGAGAAATGTTTAGCCTCGTGCCCTTAATCGCACAAC
TTTTGCCCTGGTTCATGACCGGATGGCCCCACTGCCATTTCATTCCTGCC
ATGGGCACGCAGCAATCCCTTTCCCTGGTCTCATTCAGACTACGCGACGT
TTTCCTCCACGCTGCCTTTTTCCCGCTTTTTTGGTTTTTTTTGGGAGCTC
CTGCACGCAGGTCGCGAGACCGACCTCATGAAAGCCAAGTCAAAGGGCTC
GCGAGCCACTGGACTTCCTAGCGGCAATACTCCCGTCCACTGCCGACAAC
CACGGGGCAGCACAGCGTCTCATTGTGCTCGAAAGCCTCTTCAAACGATA
CAATGCCCAGCTCGTCAAGTATTGGTGCTTGGTCTGGCCTCGAGGCCTTT
TTACGGGACGGGGGAGACGCCGGCGCTTGGAACACCAGGGTTCGCCTCCT
CGGGAGTTGACGACGTGTTTGAGTTGATTCCACGATGGCTGAGTCGACCG
CATTTGTGGCTACATGGGCAGCCATGCGCTACATGTCATGCTCTGATATT
TGCGTTTATGTTGACAATGTTGGTCTCAACGTCCCAGCAGCTAAGTGGCA
ACCCTTCCCCTTTACACAACACAGCCCCCCTTCCCCTCCTAGTCATCGAC
CTAAACATGAGACGGAATGACCACCTCTGTGGCGTATGGAGAAGGAGACA
AATGCCCTGCAATGTGATGACCACATCTCTGGTCCCTCTCTTCCCCCTCC
TCTTCGCCTTGACGCATCTCAGCCCCGGGGTCGCCTTTGTTCCTGCCACG
CCCTCCCCTTTCCCCTGCATCCTTTCCTCCACACCCCACCCTCTCACCAT
CCCGACCCCCCGCCCCGTAACCTCCACGGCCGTGTCCGCCTTCCTGAATG
ACGACAGTCGCCTTGGCCCTTCCTCCCTCACACCTTCCCCCGGTCCCTCC
CCTCCCCAAGGCCGTATCACCCTCGTGGGCGCCGGTCCTGGGGACCCGGA
TTTGCTCACCCTAGCCGCCATCCGGGCGATGGCCACAGCGGATTTGGTGG
TCGCGGACCGACTCATTCCCCCCGAGATGTTGAAGTTGGTAACGGGCAAT
TTGAAAATTGCGGGGAAAAGGCCGGGCTGTGCGGATGCGGCCCAGAAGGA
GATTTACCAGTGGGTGCGGGACGGGATGGCGGCGAGGCAACACGTGGTTC
GGTTGAAAATAGGAGACCCCTTTCTCTTCGGCCGGGGCGGGGAGGAAGTC
TTGGAGTTTCGAGAAAAATTGGGCGTGGACCCGGAAATCATACCCGGAGT
TTCCTCGGCGTTTGCGGCGCCGTTACTGGCGGCCATCCCAGTCACCCACC
GGGGAGTATCGAACCAAGTGTACGTGTGTACGGGCTTCGGAAAAGGAGGC
GACCGGCCCTACCTCGCCCCTTTCTACGCGAACCAGACCGCGGTCTTTTT
GATGGCGGTGGGGAGGTTGCGGGAGCTGACGCGTCAACTGACCAGCGTGG
CAGGGTACCCGGAGGAGACGCCTGTGGCGATCGTCGAACAGGCCTCGACC
CCACGGCAGCGGACCGTGGTCGCCACTCTCGACAAGATCGCGGCGGTGGC
GGAGAGAGTAAGGGTGACGGCACCCGCCGTGGTGGTGGTGGGGGAGGTGG
TGCGTGTGTTGTTGGAGGAGGGGGAGGACGGGGAGGAGGGAGGGCGGGTA
ATCGAGGGGAAGGCGGGCCGCAAGGGGTGTGGAGACGCGATGCTGGCCTA
CATCGGGGGCGCAATGACGGACCAGGAGGCGGCCCTGTTCGGGGCGGATG
GACGAGGAGGAGGGAAGGAGGAGGGAGGGATTCCCTCTTTCTTCAAGAGG
CTCCGTCGGGCTAGGGACGAGACGGCCGGGCGGTCAGAAGAGGTCGAGGA
GGGCGCCAAGGAAGCGATCATGGCGCGAAGGGGCGGAGGGAGGAGAAGGA
CGTCCAGGTTACGGAAGTGGAAGTTTTGGGTGAAAGCAGCGCTTGGCCGA
GTTTTGAAGAGAGCGAAGTGACGATTTTTGGTGAATGTGGCAGGGGAGAG
TTAACCGCGTCAGTGTAGGGAAAGGACATTGCGTGGCAGTATGAGGATGG
GCTTGCTTTGGGCGACTGCTTGGTGCCTGCTTGGTGCCCTTGAGAGACTT
CCGCACAAGCATATTAAGAATTAAAATGTCATGCGCGTGTCAACAAGTCT
CTCATGAACATCATGTATGATCAGGATTTTGGATACAGGACAGCACAGCA
CATTTTTGAATCCTTTGTTGTGTATATAAAATGACACTGGTTAAGCAGGA
ACAAAACGATTTGGACGTATAGGGCGCTCAGCTTGTATATTTTGGTGAAG
GCATCAAGTAAAAAAGAACACTGACATTGAACGGAATGA back to topprotein sequence of rna4742 >rna4742-protein ID=rna4742-protein|Name=rna4742|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MLRIWFKYLTARLLLVSVALVVSSLGANLMALALFLVIRPFSRSLYRRLV
SQYVACMWIDALSLLLPGTQIHITGDSGASLFPPSFPPSVCLGLRAISPS
RFHGAQGGGTVEGLLLMRRWKAFHYSDGGRLVINGSMLTWGTCLPLHAPT
KTSPSLSPSLPPFLPSSLRPPQTCPTGSPRASWWRTTSTKATGGSC back to topmRNA from alignment at CM002464.1:233432..234736+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4742 ID=rna4742|Name=rna4742|organism=Nannochloropsis gaditana|type=mRNA|length=1305bp|location=Sequence derived from alignment at CM002464.1:233432..234736+ (Nannochloropsis gaditana)
TTGTATAGCTAAATGACAGGATTTTGGGGCATAACAATGTGATGTATGCA
AGGTAGACCTGATAGTGAACTCTGAACTCTTAGTGCTGGTTCGTTGCCGT
CACTTTTTGCTTCAGCCcctctcactctcctcctttccttcccgcacctC
GCGATAGAAGGATCAAGCTCTGGATCGGGTGCTTGTGGCGCTCGGTTTGT
GCTTGGACGCTGTAGGAGCCCGGTGCGACCAACCCCCCTGTCTGCCTCTC
CCCGAGGCTCCCTCGTACTGGGTCGATTGCTTCCCTGGAATGCCGTGTAG
TCCCCACGGGACTAGGAAGACCAGACAAGGCGGAGAGAGACAGCGAACAT
CGACAAGTCGACAGGGGCTACACCGTTGGCGCATTGCACCTGGCACGGCG
CGGGCCTTATCACCTGTGGTCACGAATCGATCCGCCCGTTGAGAGGTCCG
TCCATGATGAATGCTATCGCCTTCAATGGCACCgactcacctcctccacg
cttgTCCCCTGTACGATGTAGGAACGGGCGTGAGACATGCTCCGAATATG
GTTCAAATACCTGACCGCACGGCTCCTGTTGGTCTCTGTGGCCCTTGTTG
TGTCCTCCCTGGGCGCGAACCTGATGGCCTTGGCGCTCTTCTTGGTCAtc
cgccccttctcccgctccctttACCGGCGTCTCGTGTCTCAATACGTGGC
CTGCATGTGGAtcgacgccctctccctccttctccccggcaCCCAAATCC
ATATCACCGGCGACTCTGGTGCGTCCctgttccccccctccttccccccc
tcggtcTGTCTCGgccttcgcgccatttccccctctcgctTTCATGGGGC
CCAAGGTGGCGGGACGGTGGAGGGCTTGTTATTAATGAGACGGTGGAAGG
CTTTTCATTATTCGGACGGTGGAAGGCTTGTTATTAATGGATCGATGTTG
ACGTGGGGCAcatgccttcctctccacgccccgACAaagacctctccctc
cctctctccctccctccctcccttccttccttcctcccttcgtccccctc
aGACATGCCCGACGGGATCACCGCGGGCATCGTGGTGGCGAACCACCAGT
ACGAAGGCGACTGGTGGTTCATGCTGATGGTCGCACGCTTCCTGGGCCTC
CACGGGAATGTCAAGATCATTGTCCGCGAGGGGCTTCGGCGCATCCCCCT
GCTCGGGTGGTTGATCCGCTTGGTGGAGTACCcaaccatctcctcctcct
ggtcgcACTCCCGCTCCACCTTGTTCGGCCTGCTCCGGTCTTTCAACACG
GGTGA back to topCoding sequence (CDS) from alignment at CM002464.1:233432..234736+ >rna4742 ID=rna4742|Name=rna4742|organism=Nannochloropsis gaditana|type=CDS|length=591bp|location=Sequence derived from alignment at CM002464.1:233432..234736+ (Nannochloropsis gaditana)
ATGCTCCGAATATGGTTCAAATACCTGACCGCACGGCTCCTGTTGGTCTC
TGTGGCCCTTGTTGTGTCCTCCCTGGGCGCGAACCTGATGGCCTTGGCGC
TCTTCTTGGTCAtccgccccttctcccgctccctttACCGGCGTCTCGTG
TCTCAATACGTGGCCTGCATGTGGAtcgacgccctctccctccttctccc
cggcaCCCAAATCCATATCACCGGCGACTCTGGTGCGTCCctgttccccc
cctccttccccccctcggtcTGTCTCGgccttcgcgccatttccccctct
cgctTTCATGGGGCCCAAGGTGGCGGGACGGTGGAGGGCTTGTTATTAAT
GAGACGGTGGAAGGCTTTTCATTATTCGGACGGTGGAAGGCTTGTTATTA
ATGGATCGATGTTGACGTGGGGCAcatgccttcctctccacgccccgACA
aagacctctccctccctctctccctccctccctcccttccttccttcctc
ccttcgtccccctcaGACATGCCCGACGGGATCACCGCGGGCATCGTGGT
GGCGAACCACCAGTACGAAGGCGACTGGTGGTTCATGCTGA back to top
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