EWM25944.1, cds4730 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25944.1 vs. NCBI_GenBank
Match: gi|585107818|gb|EWM25944.1| (hypothetical protein Naga_100695g3 [Nannochloropsis gaditana]) HSP 1 Score: 387.111 bits (993), Expect = 6.370e-136 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
Query: 1 MLRIWFKYLTARLLLVSVALVVSSLGANLMALALFLVIRPFSRSLYRRLVSQYVACMWIDALSLLLPGTQIHITGDSGASLFPPSFPPSVCLGLRAISPSRFHGAQGGGTVEGLLLMRRWKAFHYSDGGRLVINGSMLTWGTCLPLHAPTKTSPSLSPSLPPFLPSSLRPPQTCPTGSPRASWWRTTSTKATGGSC 196
MLRIWFKYLTARLLLVSVALVVSSLGANLMALALFLVIRPFSRSLYRRLVSQYVACMWIDALSLLLPGTQIHITGDSGASLFPPSFPPSVCLGLRAISPSRFHGAQGGGTVEGLLLMRRWKAFHYSDGGRLVINGSMLTWGTCLPLHAPTKTSPSLSPSLPPFLPSSLRPPQTCPTGSPRASWWRTTSTKATGGSC
Sbjct: 1 MLRIWFKYLTARLLLVSVALVVSSLGANLMALALFLVIRPFSRSLYRRLVSQYVACMWIDALSLLLPGTQIHITGDSGASLFPPSFPPSVCLGLRAISPSRFHGAQGGGTVEGLLLMRRWKAFHYSDGGRLVINGSMLTWGTCLPLHAPTKTSPSLSPSLPPFLPSSLRPPQTCPTGSPRASWWRTTSTKATGGSC 196
BLAST of EWM25944.1 vs. NCBI_GenBank
Match: gi|1147709932|dbj|BAW99691.1| (lysophosphatidate acyltransferase 3 [Nannochloropsis sp. NIES-2145]) HSP 1 Score: 116.316 bits (290), Expect = 4.199e-27 Identity = 59/72 (81.94%), Postives = 63/72 (87.50%), Query Frame = 0
Query: 7 KYLTARLLLVSVALVVSSLGANLMALALFLVIRPFSRSLYRRLVSQYVACMWIDALSLLLPGTQIHITGDSG 78
K++T RLL VSV LV SS+GAN+MALALFLVIRPFSRSLYRRLVSQ VACMWIDALSLLLPGT IHI DS
Sbjct: 7 KHMTLRLLFVSVCLVTSSIGANMMALALFLVIRPFSRSLYRRLVSQCVACMWIDALSLLLPGTNIHIAADSD 78
BLAST of EWM25944.1 vs. NCBI_GenBank
Match: gi|1210525699|dbj|GAX15515.1| (lysocardiolipin and lysophospholipid acyltransferase [Fistulifera solaris]) HSP 1 Score: 58.9214 bits (141), Expect = 7.320e-7 Identity = 27/65 (41.54%), Postives = 45/65 (69.23%), Query Frame = 0
Query: 14 LLVSVALVVSSLGANLMALALFLVIRPFSRSLYRRLVSQYVACMWIDALSLLLPGTQIHITGDSG 78
L+ S ++ G + + LF+ +RPFS+++YRRL +Q A ++DA++LLLP T+I++TGDS
Sbjct: 53 LITSFVALLCIFGLMTILVVLFVTVRPFSQNVYRRLAAQLGAASFLDAIALLLPNTKIYLTGDSD 117 The following BLAST results are available for this feature:
BLAST of EWM25944.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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