Naga_100695g3, gene4579 (gene) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	Naga_100695g3
Unique Name	gene4579
Type	gene
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002464.1:233432..234736 +

Link to JBrowse

Properties


Property Name	Value
Locus tag	Naga_100695g3
Gene biotype	protein_coding
Gbkey	Gene

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002464.1	supercontig	CM002464.1:233432..234736 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
SRP229557	2021-06-30
GO annotation for N. gaditana B31	2020-04-08
PRJNA174770	2019-07-03
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ngnoL006	ngnoL006	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00800	NO12G00800	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
rna4742	rna4742-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
rna4742	rna4742	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of rna4742

>rna4742-protein ID=rna4742-protein|Name=rna4742|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MLRIWFKYLTARLLLVSVALVVSSLGANLMALALFLVIRPFSRSLYRRLV
SQYVACMWIDALSLLLPGTQIHITGDSGASLFPPSFPPSVCLGLRAISPS
RFHGAQGGGTVEGLLLMRRWKAFHYSDGGRLVINGSMLTWGTCLPLHAPT
KTSPSLSPSLPPFLPSSLRPPQTCPTGSPRASWWRTTSTKATGGSC

Synonyms

Publications