NO09G02990, NO09G02990 (gene) Nannochloropsis oceanica

Overview
NameNO09G02990
Unique NameNO09G02990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1243
Alignment locationchr9:875779..877021 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:875779..877021 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G02990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010833NSK010833Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02990.1NO09G02990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G02990.2NO09G02990.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588496gene_4247Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100099g5gene3056Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02990.1NO09G02990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G02990.2NO09G02990.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02990 ID=NO09G02990|Name=NO09G02990|organism=Nannochloropsis oceanica|type=gene|length=1243bp
CAGAACCATCGTCGCGCCTCGTCGTCTTGTCGCCTTGTCAACCCCCAGCA
CCCACCATCATCATCATGCTTCAACGGGCAGGTAAACTTGCGGTGGGAGC
CCTCCTGCTTCTCGTCTGCGTCGTCTTGTCCACGCAAGCCTTTGTCTTAC
CCAGCTGTAGCCGCTTCATCACCAGCAGTCGAAGCACCCGAAGATTGTCC
AAGGCTAGGGACGGGGTCAAGATGATGCTGCTTCCGCCCGAAGCGCCCCA
GTCGTTCCTCTCCTCCTCTGCAGGCCTCATGgtatgtgtataatttgcgt
tcgtggtgtggaggggagaggatgtgaagtgaaggctcagataagcaacg
caggtttgttgtattgagaatgctggtttgcttgctgtttttatggtcat
tcgcatccgcccgcacagaggaagggtggaagacaccacgctcgaaaagg
acggcagattagcacccctccaacagtgtcattatcgttggtctgctacg
atggtattcacagtccctcattccgacccctcttctatacctatctgcct
ttcttgtacagGTTGCTGTGTCCCGTTTCGTGAAGGACGTGCCTTCCACG
CTAACAGACATGGCGGACGGGGCCGCTGATGCCGTTGGAGCTACTGCCAC
GGGCACCAACGCTGATGGCTCCTACACGAATGCGGGAGAAGCAGTCGAGg
tatgtgcattacctggccttcggtgcggtttgtggctcttctcctgtcct
gtaatgtgctggcgttgacataggcatgtgcttacgcctcagccttcaca
tattctctgccctcctcatcttttttcacttacacatgtctattgaacgt
atattactactgcacatatacagGAGATCTACAATGCGGGCAACCCCGAC
TTGCCCCCTCCTTATTACGCCGTGGCCTTTGCGTTGGTCCTATTGGTGGT
CTCGGGTATTCAGCAATTGTCTTTAGGCAATGTTTTTGACGAGGAGGAGA
AATCTGCCTCGTCTAGTGGCGCGGTGGCTCGTCGGATGGCCCTGCGAAAT
CGTAGTTTTTTCAAGGGGGGGAAGAAGAAGTAGAGAGGGCATGAGAATTG
AGAGCTGAGAGGGGTGTACAGATGGGAGGAAGACAGACAGGAGGTTAATT
GGAGGGCGTGGTCGAAAGAATCAAGAGAAGACGAGAATTTACGAAGCGTT
TCCAAGAAGGCAAAGAAGGAAACAACCAAATGTCAGAATCCTG
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protein sequence of NO09G02990.1

>NO09G02990.1-protein ID=NO09G02990.1-protein|Name=NO09G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bp
MLQRAGKLAVGALLLLVCVVLSTQAFVLPSCSRFITSSRSTRRLSKARDG
VKMMLLPPEAPQSFLSSSAGLMVAVSRFVKDVPSTLTDMADGAADAVGAT
ATGTNADGSYTNAGEAVEEIYNAGNPDLPPPYYAVAFALVLLVVSGIQQL
SLGNVFDEEEKSASSSGAVARRMALRNRSFFKGGKKK*
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protein sequence of NO09G02990.2

>NO09G02990.2-protein ID=NO09G02990.2-protein|Name=NO09G02990.2|organism=Nannochloropsis oceanica|type=polypeptide|length=141bp
MLQRAGKLAVGALLLLVCVVLSTQAFVLPSCSRFITSSRSTRRLSKARDG
VKMMLLPPEAPQSFLSSSAGLMVAVSRFVKDVPSTLTDMADGAADAVGAT
ATGTNADGSYTNAGEAVEVCALPGLRCGLWLFSCPVMCWR*
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Synonyms
Publications