NO09G02540, NO09G02540 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO09G02540 vs. NCBI_GenBank
Match: EWM27545.1 (hypothetical protein Naga_100015g21 [Nannochloropsis gaditana]) HSP 1 Score: 738.0 bits (1904), Expect = 5.300e-209 Identity = 543/1465 (37.06%), Postives = 703/1465 (47.99%), Query Frame = 0
Query: 3 WENVAACLGELLGEDG-GQGGGIKDRGCHSCIEAYQFLYEKMEAAAGEEETPEDLQCFIPLRGAAVVDHIVESLRPAVASPADFAASVSPALPLLTLLLNDKRCCAQLSNNNRADEKVLSLLVEIIEKVQEQLTVREGYNTAAGHEQM-PLADLANSLLTTIAYQVCDLSNLSESLLQKVMTAIRLAVDGRFGDFAPFLPVQGLLVSSKLLPRLATNPGCAGEARGLLKAILLYVLKGGRITCGGRRHEEGERGMTESVNEAGVDMAVTALTQAQSTFPVPLLARDPVPGKEPSDGSYCSFIREHFQSEVLEHLANHDLLLAVRVVERLLPLLSPAGLTDKKVIKTLLDVLDKAMKTNSRTTTSSRSIDSTTERLKVHQMRVQSLRIWTCSYVLAVARDWSRIVQNVKGKDKVRKEKFLTDFLNCLPRPLLRHFSETPCGG--QREYDCEALRLCSVVLSKKEWQPYLWSXXXXXXXXXXXXXXXXXXXXXXXXXXQTIGCVGSKKDASVRGILLNILATVHNGSGSDPAFLRFEAGLRFLSSLVPGAIPGSLLLKRDHTQRGWQEVPPLDLDTQRHVLVLAIRVLARHNSIQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFTFPPQDIQDSTPPPQPLAGKAAVAAWSHLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKETGGAIMISPRRKEEDCPIPGMLLDEVFEVLRNRKREQKGVLLPSSPLALLHAMADEALKKYAISDRPIQGDESRLWKEVVGRVY--VPPPFPTPSSTPAAPSPPA-----------------HA----HLGFLLLGLKALLLRPADSRNTTXXXXXXXXXXXXXXXXXXXXLEGLLRRLTTFNGGNVKEDVPSPNPFLYFYCATMTRLVGELGKKGGIAGGRERRKEVEMQACAVLEMLPKFATSVLAGVAFRDGEALQRASGGGFVVQQWVNLLCACLERCGG---SGGXXXXXEEGEESLGYLLEDMEDVPEARLRAVLDVLGPLWELQGDCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKKW-LNSAYTAPALTTLVCPLAHAYLRSVNTMLQASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNEYAVKASIHILRVLHE----------------------------AXXXXXXXXXXXXXXXXXXXSPSP--WDLEALGGIAQALACWW-----------------EATAALAGPEDLGG----GRGGVGAAGSALVVGQEEQQSVHPCRAALMKDVKRITDSLFDSLSSSENSSSRSGSDVFRCSSNSFHTAGSSALLHQAPAAYLRALSPLLLALLSYETGQQRVITWWRASGLDKNENLRLICNGEEFRNESVLSGLRALVDKGLIMSKDPTLAPSSVSXXXXXXXXXKQKDGQRIEREGVEETDQLFIIEGDRGGLSKVKKRWSGV 1386
W +VAACL +LLG G GQG GI+D G H C +AY +LY +EA A EEETPEDLQC IP +G +VV HI L PAV SP DF V+ ALPLLT+LLNDKRCCAQL+ NNRADE+VL +L++I+E Q+QL +E N A H + LAD++ + T+A+Q CD+S+LSE +L K++T +RL V G FG +A +P + L S KLLPRLA N AG RGLLKAILL VLKGG ++ E++N + MAVTAL QA+ST P LL RDPV G PSD +YCSF+R +F + LE L HDL LAVRVVE +LPLL PAGL+D +V++ +L++L++A++ S T + + TE + H +R +L IWT SYVL+VARDW IV+ V+ ++K KE FL L L +PL+ +F+ P G Q E D A RL +LSKKEWQ YLW + + VGS++D SVRG+LLN+LAT HN G+DPA RFE GLR LS LVPGA+P SLL + T Q++PPL+ +TQ H+L+LAIRVLA+H SI + S + + S P PL +A AAW H+L R+ +E + G +DEVFE+L + + + PL+L H +ADEAL+ Y SD +Q +RLW V+ Y PPP P P ST PS A HA LGF+L+GLKALL RP L G LRRLT+ G + D SP PFL+ Y + RLV E+G G E QAC VL ML FATS A V F+D + GGG +VQ W NLL CL+RC G G E ESL LLE ED P +LRAVL VL P+ +G W N L +V LAH YLR+VNT +Q S L+ Y AS +L+++ E +P P W+L +L GI +LA WW ++ A ED G + GV A + + + +HPCRA L+ DV R+ D + SL SR D+ R SS S G ALL + PA YLRAL PLL ALL+ E G +R+ WWR SGL ENL + +G E+ + V S + + +G+I S+D L S R E+ + +QLF+IE GL VKKRWSG+
Sbjct: 31 WPSVAACLKDLLGGTGEGQGEGIRDHGSHRCRDAYAYLYNAVEAVAHEEETPEDLQCLIPSQGPSVVGHITRGLLPAVHSPIDFTDQVAAALPLLTVLLNDKRCCAQLAKNNRADERVLGVLLDILEGAQQQLVTKE--NQGAYHVHLIALADISFTAFDTLAHQACDMSHLSEEVLLKILTVLRLGVAGGFGKWAALVPARSLQTSIKLLPRLAPNARVAGHVRGLLKAILLRVLKGGSLS---------SSPTAEALNTEEIGMAVTALAQARSTAPQALLVRDPVSGPPPSDATYCSFVRSNFDEKRLEWLQRHDLPLAVRVVESMLPLLGPAGLSDGRVMRKVLEILNRAIRGPS---THGAGLCAETELQQGHVVRRVALEIWTSSYVLSVARDWDIIVRRVQ-RNKSGKEAFLRQLLRVLCKPLVHYFASAPSGNAYQGEQDSRASRLMLAILSKKEWQVYLWG------------------ALKWGRTEEALQSVGSRRDGSVRGVLLNMLATRHNDHGNDPARHRFEDGLRCLSFLVPGALPESLLPQGSWTMPDRQQIPPLEGETQLHLLILAIRVLAQHESISKCYLTFSDLHQDEKGRSIESGRPPSQGPASFSLLSSPSPSPGSVEAAGSIAGPPPLPERAIKAAWGHMLRSLLPAFVPGALPTLLSASLPSADNNRVERRIP----------QEMSVAVAGNWVDEVFEILLPQSTPGENGVGKGLPLSLCHTLADEALELYGASDLLVQ---TRLWSTVLACTYDPAPPPVPVP-STVLGPSCEAAGAVGDSQAGKAASCGHHATSPVTLGFVLIGLKALLFRP-----LPWNTPRTSSLPLSPLPQLILFLAGALRRLTSSEGKSQAGDPRSPRPFLHLYRLALLRLVSEVGTVGKRGPAAETTLR---QACMVLTMLSHFATSPFAHVVFQDAWIPGQGMGGGILVQHWQNLLSTCLQRCRGGFVEAGEREADVEDRESLSILLE--ED-PVRQLRAVLSVLDPVLGPKG------------------------------RDLCPHDADGTSGANGWDANRPSKQNYLAHMV--LAHVYLRAVNTFVQTS--------------RRGEGMHQRERRRTLLDTYVSAASERLLKMVEEITSSRDEPSLLRTCLCGSPSCERAVAYRGREVRSGARAGGKTWLSPCLAPPPVSWELASLAGICGSLAKWWPLSTRTESGFVKGAEAHAPSSVAAQAEDNPGVAAVSKRGVLANKGGVSILENHPICIHPCRAHLVGDVSRMVDRVLTSL----GGCSRGACDISRRSSMSSAEPGPPALL-KTPAPYLRALQPLLTALLTRENGDERLFMWWRVSGLSAVENLGIPLDGREY--QDVRSLFQICLSRGIISSQDKALTTSLA------------PGNSRGEKRSAGDQEQLFLIESRDDGLRNVKKRWSGI 1372 The following BLAST results are available for this feature:
BLAST of NO09G02540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02540 ID=NO09G02540|Name=NO09G02540|organism=Nannochloropsis oceanica|type=gene|length=4304bpback to top protein sequence of NO09G02540.1 >NO09G02540.1-protein ID=NO09G02540.1-protein|Name=NO09G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1398bpback to top Synonyms
Publications
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