Naga_100015g21, gene3016 (gene) Nannochloropsis gaditana

Overview
NameNaga_100015g21
Unique Namegene3016
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:818932..823122 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100015g21
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:818932..823122 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL129ngnoL129Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02540NO09G02540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3138rna3138-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3138rna3138Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3138

>rna3138-protein ID=rna3138-protein|Name=rna3138|organism=Nannochloropsis gaditana|type=polypeptide|length=1396bp
MLKIITSTTHTCLQGMDAMKARPDCPRPPPWPSVAACLKDLLGGTGEGQG
EGIRDHGSHRCRDAYAYLYNAVEAVAHEEETPEDLQCLIPSQGPSVVGHI
TRGLLPAVHSPIDFTDQVAAALPLLTVLLNDKRCCAQLAKNNRADERVLG
VLLDILEGAQQQLVTKENQGAYHVHLIALADISFTAFDTLAHQACDMSHL
SEEVLLKILTVLRLGVAGGFGKWAALVPARSLQTSIKLLPRLAPNARVAG
HVRGLLKAILLRVLKGGSLSSSPTAEALNTEEIGMAVTALAQARSTAPQA
LLVRDPVSGPPPSDATYCSFVRSNFDEKRLEWLQRHDLPLAVRVVESMLP
LLGPAGLSDGRVMRKVLEILNRAIRGPSTHGAGLCAETELQQGHVVRRVA
LEIWTSSYVLSVARDWDIIVRRVQRNKSGKEAFLRQLLRVLCKPLVHYFA
SAPSGNAYQGEQDSRASRLMLAILSKKEWQVYLWGALKWGRTEEALQSVG
SRRDGSVRGVLLNMLATRHNDHGNDPARHRFEDGLRCLSFLVPGALPESL
LPQGSWTMPDRQQIPPLEGETQLHLLILAIRVLAQHESISKCYLTFSDLH
QDEKGRSIESGRPPSQGPASFSLLSSPSPSPGSVEAAGSIAGPPPLPERA
IKAAWGHMLRSLLPAFVPGALPTLLSASLPSADNNRVERRIPQEMSVAVA
GNWVDEVFEILLPQSTPGENGVGKGLPLSLCHTLADEALELYGASDLLVQ
TRLWSTVLACTYDPAPPPVPVPSTVLGPSCEAAGAVGDSQAGKAASCGHH
ATSPVTLGFVLIGLKALLFRPLPWNTPRTSSLPLSPLPQLILFLAGALRR
LTSSEGKSQAGDPRSPRPFLHLYRLALLRLVSEVGTVGKRGPAAETTLRQ
ACMVLTMLSHFATSPFAHVVFQDAWIPGQGMGGGILVQHWQNLLSTCLQR
CRGGFVEAGEREADVEDRESLSILLEEDPVRQLRAVLSVLDPVLGPKGRD
LCPHDADGTSGANGWDANRPSKQNYLAHMVLAHVYLRAVNTFVQTSRRGE
GMHQRERRRTLLDTYVSAASERLLKMVEEITSSRDEPSLLRTCLCGSPSC
ERAVAYRGREVRSGARAGGKTWLSPCLAPPPVSWELASLAGICGSLAKWW
PLSTRTESGFVKGAEAHAPSSVAAQAEDNPGVAAVSKRGVLANKGGVSIL
ENHPICIHPCRAHLVGDVSRMVDRVLTSLGGCSRGACDISRRSSMSSAEP
GPPALLKTPAPYLRALQPLLTALLTRENGDERLFMWWRVSGLSAVENLGI
PLDGREYQDVRSLFQICLSRGIISSQDKALTTSLAPGNSRGEKRSAGDQE
QLFLIESRDDGLRNVKKRWSGIQSAEKVVQEGKSILNAKTKRSKVA
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Synonyms
Publications