NO09G02310, NO09G02310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02310 vs. NCBI_GenBank
Match: EWM27531.1 (general transcription factor polypeptide 5 [Nannochloropsis gaditana]) HSP 1 Score: 601.3 bits (1549), Expect = 4.100e-168 Identity = 431/713 (60.45%), Postives = 473/713 (66.34%), Query Frame = 0 Query: 98 SSADDPSTVRLLTRQTGKPLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRKDGTTGDRTVVAKEVVGTISTTFQFTALADFQYLTTQAFLPVGTADVVSKTRLEIVPSSFVPVAHAGNYAYTSLKSSALANQDTARRQGVVIKFGCPIPKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRT------------------------------------------RGGREMWQRKALESKFEGDDL-HAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGLEKLKTSYGEVWKKVRAEAGREDEEEEGV------------------------EELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKAECTAQGGWFRLSDLTVLRGKIKRYLSGKVAECVRTGSVEPVTGGRGGKGGREEGALSPGEMILEAEARRGEEVVLPE----RGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARQLERLFGQPGRRTVDRARANTAAVTRGRTRHQGGDEDKE--DDLGRTFVIPLTAGDVQNASSIRLLGGYQGADYS 738 +S D +TVRL T + G+PLKLKRLLAVDLPVLCS PMTAVSMLGG+DRLSAACTG RKL F FRP D+LSIP+ SQ KIP+SRLLLRVR+R+ TG R V EVVGT+STTFQF LADFQYLTTQAFLP GT D+VS+ RLEIVP SF+PVAHAGNYAY SLKSSALA+ DTARRQGVVI++GCPIPKAPPAMLVNRPRRR EKYGQVLEKLQALFDR RGGREMWQRKALES+FE + L HAFLELLRVVAYNMSNGPWRG WV+YGYDPS D VAR YQALDVRWKEAGLEK+K +Y +V +K + G +E EL+LFGLPVRRQMVFQLCDLG ASLQ LVL +PRKA C+ QGGWFRLSDL LR +IKRYLS +VAECVRTGS+E V G EEGALS MI EAEARRG EVV E +G+G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX G R L L GQP + +R + GR G E+ E D+LG FVIPLTAG+++NASSIRLLGGYQG DYS Sbjct: 60 TSKKDHATVRLETSKPGEPLKLKRLLAVDLPVLCSRPMTAVSMLGGLDRLSAACTGKTRKLQFSFRPGDELSIPISSQPKIPASRLLLRVRVRRKQITGQRYAVHTEVVGTVSTTFQFRCLADFQYLTTQAFLPPGTPDLVSQARLEIVPPSFIPVAHAGNYAYVSLKSSALASHDTARRQGVVIRYGCPIPKAPPAMLVNRPRRRSEKYGQVLEKLQALFDRVSGEGTRRKGRGCPCKRRACLQSWTRTIHAFSASAPNLPVPQERGGREMWQRKALESQFEKEGLQHAFLELLRVVAYNMSNGPWRGLWVRYGYDPSLDPVARFYQALDVRWKEAGLEKVKRAYEQVRRKGEGKRGDGAAAKEXXXXXXXXXXXXXXXXXXXXXXXRTGSELQLFGLPVRRQMVFQLCDLGGASLQELVLGLPRKALCSPQGGWFRLSDLNRLRVRIKRYLSSRVAECVRTGSLEAVV-------GPEEGALSSSAMIKEAEARRGREVVWREDDFKKGAG------------------------VDRDQEGWPERQGGKAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVSEWEDDRELDGGEGXXXXXXXXXXXXXXXXXRGLRHLGDLLGQP-MGGIKSSRGDRRTARAGRQSSGGRVEEVEDTDELGGNFVIPLTAGEMENASSIRLLGGYQGGDYS 740
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_015222702.1 (PREDICTED: general transcription factor 3C polypeptide 5 [Lepisosteus oculatus]) HSP 1 Score: 120.2 bits (300), Expect = 2.800e-23 Identity = 128/472 (27.12%), Postives = 199/472 (42.16%), Query Frame = 0 Query: 120 KRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLR--------KDGTTGDRTVVAKEVVGTISTTFQFTALADFQYLTTQAFLPVGTADVVSKTRLEIVPSS----------FVP------------------VAHAGNYAYTSLKSSALANQDTARR--QGVVIKF-GCPIPKAPPAMLVNRPRR---RLEKYGQVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWK----------EAGLEKLKTSYG-----EVWKKVRAEAGREDEEEEGVEEL-----------------KLFGLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGWF--RLSD--LTVLRGKIKRYLSGKVAECVRTGSVEPVTGGRGGKGGREEG 513 +RL+ V+ P S + +GG + +S ++R+L YFRP D PV + PS+ LLLRVR R G + ++ ++ E++G I TT++F +ADFQYL A P GT + L P F+P + H Y + L S L ARR + + F +P P V +R +K+ + E+++ LF++ R +W + A++ E L LL VAY M GPWR WV++GYDP D A++YQ LD R + + ++ +++Y + K V A +D E G L + LP RQM +QLCDL SL+R++ ++ ECT + GW + SD ++ IK+ + K + P +GG G + G Sbjct: 46 RRLVCVEHPCRVLSVDKILETVGGEEGMSRTYADSSRRLELYFRPRDPYCHPV-CGNRFPSTSLLLRVRRRVAKGRGNEASGDSPEQEQMSMEILGIIGTTYKFQGMADFQYLAVHA-QPDGTQTSLYDKILLRRPEKKEFFDQDVPLFIPPPIFSRLDNPVDYFYRPEIQHREGYTHPVLSSENLIGLSRARRPHNAIFVSFEDKDVPTEPLEAAVQNWQRFCAHPDKH-RAEEEIKQLFEK----RPVWSKNAVKCNMEIHPEKLKL-LLPFVAYYMLTGPWRSLWVQFGYDPRTDPKAKVYQVLDFRIRCGMKHGYTPNDMPVKAKRSTYNYSLPITINKTVPPPARLQDITEGGPSTLPRPAPCRYKLKESAYIFREGTLPPYRQMFYQLCDLEVESLKRIIHRNDGKETECTERDGWCLPKTSDELRDIMSNMIKQIIRSKRPALFPPKAQRPSSGGPRGALDMDSG 509
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_022128713.1 (general transcription factor 3C polypeptide 5 [Pieris rapae]) HSP 1 Score: 118.6 bits (296), Expect = 8.200e-23 Identity = 108/404 (26.73%), Postives = 174/404 (43.07%), Query Frame = 0 Query: 120 KRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARK-LHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRKDGTTG--DRTVVAKEVVGTISTTFQFTALADFQYLTT----------QAFLPVGTAD---VVSKTRLEIVPSSFVPVAHAGNYAYTSLK----SSALANQDTARRQGVVIKFGCP-----------IPKAPPAMLVNRPRRRLEKYGQVLEK---LQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGL-----EKLKTSYGEVWKKVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKA-ECTAQGGWFRLSDLTVLRGKIKRYL 484 K L+ V P + A+ LGG+ +S C+ +++K L F+P++ + K + +LL+V+++K G R VV VVG + +F ++ DFQYL + +P G + + IVPSSF NY+YT K L N D + G P IP P VN + Q+ E+ +Q +FD R +W ++ ++ + +L +A++ NGPW+ WVK+GYDP ++ AR YQ LD R + AG+ + L+T + KK+ E E+ EG L LP +RQ+ + CD+ +Q ++ P +C + GW + R I +YL Sbjct: 9 KELVCVLFPGNVKNEEKAIQYLGGLKTISQVCSPSSKKHLSLSFQPDNPYVNKINGDVKAVAG-VLLKVKVKKTKEDGKLKREVVNTSVVGQVKKIHKFESVCDFQYLPVSNGPNSECLLEKLIPGGLDEPKFLDEPAPFHIVPSSFTRFDKPINYSYTDKKINVTEEELLNADPDEVHKMRSDRGIPVRRFSFNLVDEIPTEPHEYFVNIKNSKASTNPQINEEYEIVQKMFDE----RPVWSFNHVKHHTRIRTVNLKV-ILPCIAFHNLNGPWKLLWVKFGYDPRKEPYARYYQMLDFRLRNAGIYSCVSQDLETVKRDRMKKMPLEEPSEEIIPEGALYLTPNSLPTQRQIFYMYCDIHLPEVQEILAVEPPSGYQCHPKRGWLAANTAHTCRDIIFKYL 406
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_019643558.1 (PREDICTED: general transcription factor 3C polypeptide 5-like [Branchiostoma belcheri]) HSP 1 Score: 116.3 bits (290), Expect = 4.000e-22 Identity = 129/485 (26.60%), Postives = 195/485 (40.21%), Query Frame = 0 Query: 116 PLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRV----RLRKDGTTGDRTVVAK-------------------------EVVGTISTTFQFTALADFQYLTTQAFLPVGTADVVSKTRLE---------------IVPSSFVPVAHAGNYAY------------TSLKSSALANQDTARRQGVVIKFG---CPIPKAPPAMLVNRPRRRLEKYG--QVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKE----------------------------AGLEKLKTSYGEVWK---KVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGWFRLSDLTVLRGKIKRYLSGKVAECVRTGSVEPVTGGRGGKG 508 P+ K L V+ P + + LGG + +S A + ++R+L FRP D PV + P+S LL+RV R+RKD G V A EV+G + TT++F A+ADFQYL T + + LE + P++F + NY Y +L SS L ARR I F +P P V+ +++Y L +++ LF R +W R AL+ + L LL + AY ++ GPWR WVK+GYDP +D A+ YQ LD R ++ + ++K S G + + +ED E+E + LP RQM +QLCDL LQ ++ + +CT + GW + LR I +S K++ ++ + GGR G G Sbjct: 4 PINTKSLTCVEYPGRVKNVEKMLETLGGEENVSKAVSDSSRRLDLRFRPGDPYCRPVYGD-RFPTSSLLVRVRRTRRVRKDRAKGSEDVPASSSTGTMETPAPSTSSSQEERVTYNTEVLGIVDTTYRFQAMADFQYLPLHRTPDGRTVQLYDQLLLEGLEEQGFYQKDVPLFLPPATFSRIDTPQNYHYRKDPAHNYKNPMKALSSSNLIGVARARRPHNAIFFNFEELQVPTKPLDAAVD----HVDRYNLHSELAEIKKLFQE----RWIWSRNALQVR-TNIPLLRLKFLLPICAYYVATGPWRSLWVKFGYDPRKDPTAKQYQLLDFRIRQRPDAEQLAVKAKRSCFNYTLPTMMHKPLPQVVQIKDSSGAGSSGEGEAQDAKTKEDIEKEATYIFRPGMLPAYRQMFYQLCDLHDPRLQAIIHENDGGETDCTEKDGWCLPNTHAKLRDIISAEVS-KMSTIIKRD--KKSQGGRSGTG 475
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_020612436.1 (general transcription factor 3C polypeptide 5-like [Orbicella faveolata]) HSP 1 Score: 115.5 bits (288), Expect = 6.900e-22 Identity = 107/396 (27.02%), Postives = 167/396 (42.17%), Query Frame = 0 Query: 123 LAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRK----DGTTGDRTV-VAKEVVGTISTTFQFTALADFQYLTTQA--FL-PVGTADVVSK-TRLEIVPSSFVPVAHAGNYAYT---------------SLKSSALANQDT-ARRQGVVIKFGCPIPKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVR-WKEAGLEKL-------------------KTSYGEVWKK---VRAEAGREDEEEEGVEELKLF---GLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGW 467 + V+ P + LGG + +S + R+L FRPED + V + P++ LLLRV+ RK +GT+ V +E++G + TF+F +ADFQYL FL V AD +++ + P F H Y Y L LA T RR I +P+ P + +E ++ + L + R +W R AL+ +LL V+AY NGPWR W + GYDP +D A++YQ +D R G + L S G + K+ V +E +D++ E + +F +P ++Q+ +Q+CDL +QRLV ++ EC + GW Sbjct: 31 VGVEYPGYIKDENHMLETLGGEETVSRTFFNSTRRLELSFRPEDPYA-HVVCADRFPTANLLLRVKRRKKKQREGTSQPEEVKYEQEILGIVGNTFKFGVMADFQYLAPDIPDFLKQVTDADALNQDVPFHLQPPVFTRFDHPTVYNYNPEPQTSRGCKANQGDDLDEERLAGTRTRLRRPAYAIAANFNMPEVP----ATANPKAVEVANKIKDGLMETIKKLFSNRPIWSRAALQCHLTSASQERMKQLLAVIAYYWLNGPWRTLWTRIGYDPRKDPSAKIYQMVDFRVGSRRGAKNLPIKAKRDTSSFILPNLVGKTASQGSLVKEAVMVSSENKPDDKQSEEQDLPYVFTPNKMPKQKQLFYQVCDLHDPEIQRLVSRNDGQEEECHERDGW 421
BLAST of NO09G02310 vs. NCBI_GenBank
Match: PCG68642.1 (hypothetical protein B5V51_5009 [Heliothis virescens]) HSP 1 Score: 115.5 bits (288), Expect = 6.900e-22 Identity = 109/408 (26.72%), Postives = 179/408 (43.87%), Query Frame = 0 Query: 120 KRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARK-LHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRK--DGTTGDRTVVAKEVVGTISTTFQFTALADFQYL--------------TTQAFLPVG--TAD-VVSKTRLEIVPSSFVPVAHAGNYAYTSLK---------SSALANQDTARRQGVVIKFGCPI----PKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKAL--ESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEA--------GLEKLKTSYGEVWKKVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKA-ECTAQGGWFRLSDLTVLRGKIKRYL 484 + L+ V P + + A++ LGG+ +S + A+K L F+PE+ + S GK ++ +LL+V+++K DGT R VV+ VVG + T F+F +L DFQYL + + LP G T D ++ L ++PSSF Y YT + ++ N+ R V F + P P V + + +++E+ + + + R +W + +K L F+ L A M GPW+ WV+YGYDP +D AR+YQ LD R + A E++ T V ++ E ED EG + P +R + +Q CD+ ++ ++ A P C + GW + V R + RY+ Sbjct: 7 RELVGVLFPGVVKNDEKAIACLGGIRNISQVYSSCAKKRLGLSFQPENPFIRKIYSTGK-KAAGVLLKVKVKKTRDGTEVKREVVSTTVVGCVKTMFRFESLCDFQYLAVHREGSNDSPLMCSLEKVLPSGLDTIDFMLQPAPLLLIPSSFTRQEKPITYTYTDKRYLDRSSPEQGDSVHNKTRTLRSSQVAPFMFNLIDDWPAEPHESYVKQKDLKCATMPRMIEEYETV-KKLLEERPIWSLNLIRFHTKIRLSSLKVFMPSL---ALYMKTGPWKSMWVRYGYDPRKDPGARIYQTLDFRLRHAAGVRSMIMSREEITTDRERVSRRKLTEQANED-IAEGSVYFRPGMTPTQRHIFYQYCDIQLPEVEEILAAEPPPGYMCHQKRGWLPPNTDEVCRDHMFRYV 408
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_021186004.1 (general transcription factor 3C polypeptide 5 [Helicoverpa armigera]) HSP 1 Score: 114.8 bits (286), Expect = 1.200e-21 Identity = 108/406 (26.60%), Postives = 184/406 (45.32%), Query Frame = 0 Query: 120 KRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARK-LHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRK--DGTTGDRTVVAKEVVGTISTTFQFTALADFQYL--------------TTQAFLPVG--TAD-VVSKTRLEIVPSSFVPVAHAGNYAYTSLK-------SSALANQDTARRQGVVIKFGCPI----PKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKAL--ESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKE-AGLEKLKTSYGEVWKKVRAEAGRE---DEEEEGVEELKLF---GL-PVRRQMVFQLCDLGSASLQRLVLAVPRKA-ECTAQGGWFRLSDLTVLRGKIKRYL 484 + L+ V P + + A+S LGG+ +S + A+K L ++PE+ + S GK ++ +LL+V+++K DGT R VV+ +VG + T F+F ++ DFQYL + + LP G T D ++ L ++PSSF + Y YT + + N+ + R V + + P P V + + E +++E+ + + + R +W + +K L + L A M GPWR WV+YGYDP +D AR+YQ LD R + AG+ + E+ R AGR D E + E ++ G+ P +R + +Q CD+ ++ ++ A P C + GW + + R + RY+ Sbjct: 7 RELVGVLFPGIVKNDDKAISCLGGIRNISQVYSSYAKKRLGLSYQPENPFVRKIYSTGK-KAAGVLLKVKVKKTRDGTEVKREVVSTTIVGCVKTMFRFESMCDFQYLPVHREGSNDGPLTCSLEKVLPSGLDTIDFMLQPAPLLLIPSSFTRLEKPITYTYTDKRYPDRPDQGDNVHNKTRSLRSSQVAPYTFNLIDDWPSEPHESYVKQKDLKCESSPRMVEEYETV-KKLLEERPIWSLNLIRYHTKIRLSSLKIIMPSL---ALYMKTGPWRSMWVRYGYDPRKDPGARIYQTLDFRLRHAAGVRSMIVPREEITTD-RERAGRRKHADHASEDIAEGSVYFRPGMTPTQRHIFYQYCDIQLPEVEEILAAEPPPGYMCHQKRGWLPPNTDEICRDHMFRYV 406
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_002600174.1 (hypothetical protein BRAFLDRAFT_57181 [Branchiostoma floridae] >EEN56186.1 hypothetical protein BRAFLDRAFT_57181 [Branchiostoma floridae]) HSP 1 Score: 114.4 bits (285), Expect = 1.500e-21 Identity = 128/445 (28.76%), Postives = 192/445 (43.15%), Query Frame = 0 Query: 116 PLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRV----RLRKDG-TTGDRTVVAKEVVGTISTTFQFTALADFQYL---------TTQAF--LPVG---TADVVSK-TRLEIVPSSFVPVAHAGNYAY------------TSLKSSALANQDTARR--QGVVIKF-GCPIPKAP-PAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAG-----LEKLKTS----------------------------YGEVWKKVRAEA-GREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGWFRLSDLTVLRGKIKRYLSGKVAE 490 P+ ++ L V+ P + + LGG + +S A ++R+L FRP D PV + P+S LLLRV R++K+ +R EV+G + TT++F A+ADFQYL T Q + L +G D K L + P++F + NY Y +L SS L ARR + + F +P P +V+ + L +G+ LE+L LF R +W R AL+ + G L LL + Y GPWR WVK+GYDP +D A+ YQ LD R ++ L K K S G + R + +ED E+E + LP RQM +QLCDL +Q LV ++ C + GW L + K++ +S +V++ Sbjct: 4 PINMRSLTCVEYPGRVKNVDKMLETLGGEENVSKAACDSSRRLDLRFRPGDPYCRPVYGD-RFPTSSLLLRVTRRRRVKKNRIKEEERVTYNTEVLGIVDTTYRFQAMADFQYLPLHRTPEGRTVQLYDQLLLGGLEGGDFYQKDVPLFVPPATFSRIDTPQNYHYKKDPTHNFKNPMKALSSSNLIGVARARRPHNAIFVNFEELHVPTKPLDGAVVHMDKYNL--HGE-LEELTKLFQE----RPIWSRNALQVR-SGIRLMRLKLLLPLCGYYAVTGPWRSLWVKFGYDPRKDPTAKQYQLLDFRVRQKPEAKGLLVKAKRSTFNYTLPTMTHKPQPQVVMMKDFADSPGAGSSGEGERQDGRSKEDLEKESTYLFRPGMLPAYRQMFYQLCDLHDPRIQALVHENDGKETTCMEKDGWC----LPNTKAKLRDIISAEVSK 435
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_004343519.1 (hypothetical protein CAOG_07645 [Capsaspora owczarzaki ATCC 30864] >KJE97200.1 hypothetical protein CAOG_007645 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 113.6 bits (283), Expect = 2.600e-21 Identity = 115/400 (28.75%), Postives = 178/400 (44.50%), Query Frame = 0 Query: 100 ADDP-STVRLLTRQTGKPLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLRKDGTTGDRTVVAKEVVGTISTTFQFTALADFQYLTT-----------QAFLPVGTADVVSKTRLEIVPSSFVPVAHAGNYAYTSLKSSALANQDT---ARRQGVVIKF--GCPIPKAPPAMLVNRPRRRLEKYGQVLEKLQALFDRTRGGREMWQRKALESKF--EGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGLEKLKTSYGEVWKKVRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKAECTAQGGWFRLSDLTVLRGKIK 481 AD+P + L + GKP + L A+ P + AV+ LGG ++ A N +L FRPE S V S P + LL+R++ G + D T+ V G I+T+ QF ALA Q L + VG A + S+T +++ P SF + Y + S++ A+ T A++ V + F P P PP L R + ++ ++L LF R +W R +L ++ EG + LL A+ S GPWR WV++GYDP +D AR YQ +D+R+ AG L S ++ A + + P +RQ Q+CD+ +Q+L L P A + G+FR D+ + +K Sbjct: 210 ADEPVNRSAELGLEPGKP--IPTLFAIHYPGNVKNVDRAVTTLGGHAAVNKAAQLNG-ELQLNFRPEATFSAAVRSDKTRPCASLLVRLQAPTGGMSKDVTI---SVRGVIATSTQFRALAPVQILPAPPVPAQRSLEGASLDEVGDACIFSRTDMQLPPFSFTHIDQPRTYKFKPPISNSAASNSTAPMAQKSSVRVNFSLSAPQPTGPPRGLPT--TRNTAQSARLAKELHRLFQE----RPIWSRLSLITRLRREGISTSLVMPLLMSTAFRYSTGPWRTLWVRFGYDPRRDPNARSYQMIDLRF--AGNVPLAPSLKS--ERTAASIAASQFADVFIPNTS----PSQRQCCMQVCDILLRDVQQL-LKTPVPA-LDVRFGYFRRKDVEAIVTSVK 587
BLAST of NO09G02310 vs. NCBI_GenBank
Match: XP_023371927.1 (general transcription factor 3C polypeptide 5 isoform X2 [Otolemur garnettii]) HSP 1 Score: 112.1 bits (279), Expect = 7.600e-21 Identity = 116/408 (28.43%), Postives = 177/408 (43.38%), Query Frame = 0 Query: 113 TGKPLKLKR---LLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYFRPEDKLSIPVPSQGKIPSSRLLLRVRLR---KDGTTG----DRTVVAKEVVGTISTTFQFTALADFQYL---TTQAFLPVGTADVVSKTR------------LEIVPSSF----VPV--------AHAGNYAYTSLKSSALANQDTARR--QGVVIKFGCPIPKAPPAMLVNRPRRRLEK--YGQVLEKLQALFDRTRGGREMWQRKALESKF--EGDDLHAFLELLRVVAYNMSNGPWRGFWVKYGYDPSQDSVARLYQALDVRWKEAGLE---------KLKTSYGEVWKK-VRAEAGREDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVP-RKAECTAQGGW 467 T P++L+R ++ V+ P + VS LGG + +S +++L YFRP+D PV + +S LLLR++ + + G G E++G IST ++F ++DFQYL T + D V R L I P F PV H Y + L ARR + + F +P P V+ +R +V E+L+ LF+ R +W R A+++ D L LL +AY M GPWR W+++GYDP ++ A++YQ LD R + GL+ LK G VR A + + ++ V + GLP RQM +QLCDL LQ+++ + CT + GW Sbjct: 12 TAVPVELRRERNMVCVEYPGVVRDVTKMVSTLGGEEGVSRIYADPSKRLELYFRPKDPYCHPV-CANRFSTSSLLLRIKKKTRQRKGVLGTEAHPEVTFGMEILGIISTVYKFQGMSDFQYLAMHTEASGKHTSMYDKVLMLRPEKQGFFHQELPLYIPPPIFSRLDTPVDYFYRPETQHREGYNNPPISGENLIGLSRARRPHNAIFVNFEDEVPSKPLEAAVHTWKRVCTNPMDRKVEEELRKLFEI----RPVWSRNAVKANISVHPDKLKV---LLPYLAYYMITGPWRSLWIRFGYDPRKNPEAKIYQVLDFRIR-CGLKYASQLVTMHDLKQGLGPSGTPGVRKLAPSKYKLKDTVYIFREGGLPPYRQMFYQLCDLNVEELQKIIHRNDGAETLCTERDGW 410 The following BLAST results are available for this feature:
BLAST of NO09G02310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02310 ID=NO09G02310|Name=NO09G02310|organism=Nannochloropsis oceanica|type=gene|length=2975bpback to top protein sequence of NO09G02310.1 >NO09G02310.1-protein ID=NO09G02310.1-protein|Name=NO09G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=749bpback to top Synonyms
Publications
|