jgi.p|Nanoce1779_2|21312, gene_4319 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|21312
Unique Namegene_4319
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:284010..287522 -

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Properties
Property NameValue
TranscriptId21398
ProteinId21312
Product nameRNA polymerase III transcription factor (TF)IIIC subunit-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:284010..287522 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02310NO09G02310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|21312mRNA_4319-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|21312mRNA_4319Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|21312

>mRNA_4319-protein ID=mRNA_4319-protein|Name=jgi.p|Nanoce1779_2|21312|organism=Nannochloropsis oceanica|type=polypeptide|length=687bp
MEHHQHHYHYQAVVLARRRTAELQVLQEKSKHHSSSSADDPSTVRLLTRQ
TGKPLKLKRLLAVDLPVLCSSPMTAVSMLGGMDRLSAACTGNARKLHFYF
RPEDKLSIPVPSQGKIPSSRLLLRVRLRKDGTTGDRTVVAKEVVGTISTT
FQFTALADFQYLTTQAFLPVGTADVVSKTRLEIVPSSFVPVAHAGNYAYT
SLKSSALANQDTARRQGVVIKFGCPIPKAPPAMLVNRPRRRLEKYGQVLE
KLQALFDRTRGGREMWQRKALESKFEGDDLHAFLELLRVVAYNMSNGPWR
GFWVKYGYDPSQDSVARLYQALDVRWKEAGLEKLKTSYGEVWKKVRAEAG
REDEEEEGVEELKLFGLPVRRQMVFQLCDLGSASLQRLVLAVPRKAECTA
QGGWFRLSDLTVLRGKIKRYLSGKVAECVRTGSVEPVTGGRGGKGGREEG
ALSPGEMILEAEARRGEEVVLPERGSGGSKGGGRGEGEGAGINGAAGVDG
EREREECDGVMAAATRKSKRKATGGGRGGGIGGRGRGGRSKKKARRVGGE
AEETHESESDEEEEEKKEGRYQNRGERDEEESYGQGRGDEEGMEDEEEAG
ARQLERLFGQPGRRTVDRARANTAAVTRGRTRHQGGDEDKEDDLGRTFVI
PLTAGDVQNASSIRLLGGYQGADYSSSSSDDDDGSD*
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Synonyms
Publications