NO08G03950, NO08G03950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03950 vs. NCBI_GenBank
Match: XP_005853604.1 (hypothetical protein NGA_0429500 [Nannochloropsis gaditana CCMP526] >EKU22756.1 hypothetical protein NGA_0429500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 77.8 bits (190), Expect = 4.100e-11 Identity = 44/102 (43.14%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 44 PPVLPQDREDITEWFIRTSPLKVLMEVFHQLPPPSKSLDGEYLGELLDSGSDLSNLLAYTGFYNPEITGFWIGKGF--RAEEK--WGYNLFMVNQVLTRWVG 142 PP R ++TE+ +R++ L +F LPPPS L GEYL E+LD+GS +N+L + GF P G WIGK F +EK WGYN+F RW G Sbjct: 44 PPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGF-TPFFPGAWIGKSFVEATDEKDGWGYNVF-------RWFG 137
BLAST of NO08G03950 vs. NCBI_GenBank
Match: EWM27381.1 (hypothetical protein Naga_100438g3 [Nannochloropsis gaditana]) HSP 1 Score: 77.8 bits (190), Expect = 4.100e-11 Identity = 44/102 (43.14%), Postives = 58/102 (56.86%), Query Frame = 0 Query: 44 PPVLPQDREDITEWFIRTSPLKVLMEVFHQLPPPSKSLDGEYLGELLDSGSDLSNLLAYTGFYNPEITGFWIGKGF--RAEEK--WGYNLFMVNQVLTRWVG 142 PP R ++TE+ +R++ L +F LPPPS L GEYL E+LD+GS +N+L + GF P G WIGK F +EK WGYN+F RW G Sbjct: 56 PPFNLLQRANVTEYALRSASFPSLFYLFLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGF-TPFFPGAWIGKSFVEATDEKDGWGYNVF-------RWFG 149 The following BLAST results are available for this feature:
BLAST of NO08G03950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03950 ID=NO08G03950|Name=NO08G03950|organism=Nannochloropsis oceanica|type=gene|length=1829bpback to top protein sequence of NO08G03950.1 >NO08G03950.1-protein ID=NO08G03950.1-protein|Name=NO08G03950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=231bpback to top protein sequence of NO08G03950.2 >NO08G03950.2-protein ID=NO08G03950.2-protein|Name=NO08G03950.2|organism=Nannochloropsis oceanica|type=polypeptide|length=192bpback to top protein sequence of NO08G03950.3 >NO08G03950.3-protein ID=NO08G03950.3-protein|Name=NO08G03950.3|organism=Nannochloropsis oceanica|type=polypeptide|length=172bpback to top Synonyms
Publications
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