NO07G01860, NO07G01860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01860 vs. NCBI_GenBank
Match: EWM27188.1 (hypothetical protein Naga_100010g47 [Nannochloropsis gaditana]) HSP 1 Score: 253.1 bits (645), Expect = 7.300e-64 Identity = 135/196 (68.88%), Postives = 158/196 (80.61%), Query Frame = 0 Query: 1 MSQVPWTRIREFKEEQERKKRREFEAALGRAQLQVPGQQDQQQSQGPATARAKPFQERFKESYFKERLMFGGVVGAVTGAFFGGLDAVQGIKKGEAFGVMLNTLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARDEDDWGNPATAAITTVAPLLLSATFRRNVPYAVLLIGMDVFSEATASTPSSTTSTT 197 MSQVPWTRIREFKEEQERKKR + E+ ++ Q Q + +SQG T F RFK +YFKERL+FGGVVG+VTGAFFGGLDAVQGIKKG+AFGV+LN +K KFS EH+GSAA +FSIFYSSYQGIKYI+KVAR E DWGNPATAA+ T+ PLL+S FRRNVPYAVLLIGMDV S+A++S+PSS T T+ Sbjct: 36 MSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQET-EENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFRRNVPYAVLLIGMDVISDASSSSPSSGTRTS 230
BLAST of NO07G01860 vs. NCBI_GenBank
Match: EWM27187.1 (hypothetical protein Naga_100010g47 [Nannochloropsis gaditana]) HSP 1 Score: 147.1 bits (370), Expect = 5.700e-32 Identity = 80/124 (64.52%), Postives = 95/124 (76.61%), Query Frame = 0 Query: 1 MSQVPWTRIREFKEEQERKKRREFEAALGRAQLQVPGQQDQQQSQGPATARAKPFQERFKESYFKERLMFGGVVGAVTGAFFGGLDAVQGIKKGEAFGVMLNTLPSKAKFSGEHIGSAALVFSI 125 MSQVPWTRIREFKEEQERKKR + E+ ++ Q Q + +SQG T F RFK +YFKERL+FGGVVG+VTGAFFGGLDAVQGIKKG+AFGV+LN +K KFS EH+GSAA +FS+ Sbjct: 36 MSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQET-EENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVGSAAAIFSM 158
BLAST of NO07G01860 vs. NCBI_GenBank
Match: EWM27189.1 (hypothetical protein Naga_100010g47 [Nannochloropsis gaditana]) HSP 1 Score: 90.1 bits (222), Expect = 8.200e-15 Identity = 52/84 (61.90%), Postives = 61/84 (72.62%), Query Frame = 0 Query: 1 MSQVPWTRIREFKEEQERKKRREFEAALGRAQLQVPGQQDQQQSQGPATARAKPFQERFKESYFKERLMFGGVVGAVTGAFFGG 85 MSQVPWTRIREFKEEQERKKR + E+ ++ Q Q + +SQG T F RFK +YFKERL+FGGVVG+VTGAFFGG Sbjct: 36 MSQVPWTRIREFKEEQERKKRHKVESGQEASRSQRDVLQHETRSQGQET-EENSFLGRFKGTYFKERLLFGGVVGSVTGAFFGG 118
BLAST of NO07G01860 vs. NCBI_GenBank
Match: XP_008611229.1 (hypothetical protein SDRG_07187 [Saprolegnia diclina VS20] >EQC35479.1 hypothetical protein SDRG_07187 [Saprolegnia diclina VS20]) HSP 1 Score: 75.5 bits (184), Expect = 2.100e-10 Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 42 QQSQGPA--TARAKPFQERFKESYFKERLMFGGVVGAVTGAFFGGLDAVQ--GIKKGEAFGVMLNTLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARDEDDWGNPATAAITTVAPLLLSATFRRNVPYAVLLIGMDVFSE 184 ++S PA TA A P + F + + +L+FGG+VG TG FG +DAV+ + G + ++ A G ++FS F+ SYQGIK + R +D+ N AA+ + AP + R N YA LL+G+D+F E Sbjct: 9 EESSAPAKKTADAAPPAKPFNYTTLRHKLVFGGLVGLSTGLTFGSVDAVRQAHTQYGRINAQAIRSISRTA-------GICGMLFSGFFFSYQGIKTTMEQLRGAEDFANVGVAALLSGAPFIRHPVMRTNAMYAALLVGLDLFHE 147
BLAST of NO07G01860 vs. NCBI_GenBank
Match: XP_012204521.1 (hypothetical protein SPRG_20819 [Saprolegnia parasitica CBS 223.65] >XP_012211934.1 hypothetical protein SPRG_17212 [Saprolegnia parasitica CBS 223.65] >KDO17363.1 hypothetical protein SPRG_17212 [Saprolegnia parasitica CBS 223.65] >KDO24782.1 hypothetical protein SPRG_20819 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 73.9 bits (180), Expect = 6.100e-10 Identity = 47/138 (34.06%), Postives = 71/138 (51.45%), Query Frame = 0 Query: 48 ATARAKPFQERFKESYFKERLMFGGVVGAVTGAFFGGLDAVQ--GIKKGEAFGVMLNTLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARDEDDWGNPATAAITTVAPLLLSATFRRNVPYAVLLIGMDVFSE 184 A A A P + F + + +L+FGG+VG TG FG +DAV+ + G + ++ A G ++FS F+ SYQGIK + R +D+ N AA+ + AP + R N YA LL+G+D+F E Sbjct: 19 ADAAAAPPAKPFDYTTLRHKLVFGGLVGLSTGLTFGSVDAVRQAHTQYGRINAQAMRSISRTA-------GICGMLFSGFFFSYQGIKNTMEQLRGAEDFANVGVAALLSGAPFIRHPVMRTNAMYAALLVGLDLFHE 149
BLAST of NO07G01860 vs. NCBI_GenBank
Match: XP_002181120.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47043.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 69.7 bits (169), Expect = 1.100e-8 Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 0 Query: 4 VPWTRIREFKEEQERKKRREFEAALGRAQLQVPGQQDQQQSQGP------ATARAKPFQERFKESYFKERLM----FGGVVGAVTGAFFGGLDAVQGIKKGEAFGVMLN-TLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARDEDDWGNPATAAITTVAPLLLSATFRRNVPYAVLLIGMDVFS 183 +PW RI + E +K R F L R ++ Q + S+ P +T AKPF K Y L+ FGG +G +TGA FG +D G++ + V+ N + +K ++ + +A +F +F+ + +KY KV D D G A +V L +R N+PYA++L+ MD F+ Sbjct: 10 IPWDRIPQTGTNLEEQKERIFR-ELQRETIEDEFLQQDRHSEQPVVTGEQSTDSAKPFTSN-KVPYSNMELLRQAAFGGCLGTITGAVFGFMD---GMRTAQESSVLQNASNVAKGRYLMQGTTRSATLFGVFFGGFHILKYGLKVTLDPGDVGEIGVAGAASVGTLFARPAWRPNIPYALMLVAMDGFN 194
BLAST of NO07G01860 vs. NCBI_GenBank
Match: OQR98126.1 (hypothetical protein ACHHYP_09167 [Achlya hypogyna]) HSP 1 Score: 67.8 bits (164), Expect = 4.400e-8 Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 0 Query: 47 PATARAKPFQERFKESYFKERLMFGGVVGAVTGAFFGGLDAVQ------GIKKGEAFGVMLNTLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARDEDDWGNPATAAITTVAPLLLSATFRRNVPYAVLLIGMDVFSE 184 P KPF + + +L+FGG+VG TG FG +DAV+ G +A ++ T G+A L+FS F+ +YQGIK + R +D N A A++ P + R N YA LL+G+D+F E Sbjct: 22 PVAVPVKPFD----FTTLRHKLVFGGLVGLSTGLTFGCVDAVRSHHTQFGRVDMQAMRPIMRT-----------AGTAGLLFSGFFFAYQGIKTSMEQIRGAEDIANVAVASVVAGVPFIQHPVMRANAMYAALLVGLDLFHE 149
BLAST of NO07G01860 vs. NCBI_GenBank
Match: XP_009524364.1 (hypothetical protein PHYSODRAFT_557589 [Phytophthora sojae] >EGZ21647.1 hypothetical protein PHYSODRAFT_557589 [Phytophthora sojae]) HSP 1 Score: 66.6 bits (161), Expect = 9.700e-8 Identity = 47/124 (37.90%), Postives = 68/124 (54.84%), Query Frame = 0 Query: 65 KERLMFGGVVGAVTGAFFGGLDAVQGIKK--GEAFGVMLNTLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARDEDDWGNPATAAITTVA---PLLLSATFRRNVPYAVLLIGMDVFSE 184 + RL+FG +VG VTGA FGG+D + K G+ L T+ A +G FS F+ Y GIK R++D A+AA++TVA P + SA ++N+PYAV+L+ +D F E Sbjct: 53 RNRLIFGSLVGFVTGATFGGIDGAKLYMKQHGKLAPAALGTIARGAATTGG-------AFSGFFFMYCGIKTALATQREDD----LASAAVSTVAAGLPFVRSAIMKQNLPYAVMLVALDHFHE 165
BLAST of NO07G01860 vs. NCBI_GenBank
Match: OQS01884.1 (hypothetical protein THRCLA_05674 [Thraustotheca clavata]) HSP 1 Score: 66.2 bits (160), Expect = 1.300e-7 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 0 Query: 47 PATARAKPFQERFKESYFKERLMFGGVVGAVTGAFFGGLDAVQGIKKGEAFG-VMLNTLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARDEDDWGNPATAAITTVAPLLLSATFRRNVPYAVLLIGMDVFSE 184 P AKP F + + +L+FGG+VG TG FG +DA++ + FG V + L + + G+ L+F+ F+ +YQGIK + R +D N AA+ + AP L R N YA LI ++VF E Sbjct: 21 PVAVPAKP----FNYNVLRNKLVFGGLVGLSTGLTFGCVDAIR--QHHSQFGRVGIEALQPVTRTA----GTCGLLFAGFFFTYQGIKTTMEQVRGTEDAINIGAAAVLSGAPFLRHPVMRANALYAAALIALEVFHE 148
BLAST of NO07G01860 vs. NCBI_GenBank
Match: CCA20516.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 63.5 bits (153), Expect = 8.200e-7 Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 0 Query: 67 RLMFGGVVGAVTGAFFGGLDAVQGIKK-GEAFGVMLNTLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARD-EDDWGNPATAAITTVAPLLLSATFRRNVPYAVLLIGMDVF 182 RL+FG +VG TGA FG +D ++ +K G+ N + A ++G FS F+S++QG+K + R+ D N A P L + FR+N+PYA++L+ +D F Sbjct: 45 RLLFGALVGFPTGAVFGAIDGIRTFQKCGKLSFHATNAIAKTAVYTGG-------CFSSFFSTFQGVKAAVEFNRNGRQDAINIGVATTAATIPFLKVSYFRKNIPYAMMLVALDYF 154 The following BLAST results are available for this feature:
BLAST of NO07G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01860 ID=NO07G01860|Name=NO07G01860|organism=Nannochloropsis oceanica|type=gene|length=1129bpback to top protein sequence of NO07G01860.1 >NO07G01860.1-protein ID=NO07G01860.1-protein|Name=NO07G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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