NO07G01000, NO07G01000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01000 vs. NCBI_GenBank
Match: EWM27275.1 (DNA-binding SAP [Nannochloropsis gaditana]) HSP 1 Score: 73.6 bits (179), Expect = 1.700e-9 Identity = 104/401 (25.94%), Postives = 141/401 (35.16%), Query Frame = 0 Query: 3 NSYATLSYRDLRKLCKTHGLMCKGKTAELQARLVAHAAAEQGGKGDLSAAAPQAGTDSDEGEAAQQKKREDNLRGKVEQLGMVMDGGIEKAGHADKETVAAPTAFPPRAPREDMFSDMPDLVAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKGFRRTAINVIKRKAESGGDA--------PAASTTKNGSNTT--AAESHLPKKVPKVV-SMLRKPSPASASATQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRTSNKIIPLPSGPRSFGPGTFSLKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPAPCDPSKPRPKPTYKPHTGKLPPYKDTRNVSLFSPCPVMPARKASVPKQQRGPSTTTITSNKYICNSGITEK 393 N+YATLSYR+L+KLCK HGL CKGK EL+ARL+ A E + G EG + KK + +G ++ D+ V+ DMPDL+ +P G + N ++ GDA PA +T+ S T A+E +P L K S A+ G SS +K S R G T S+ + + +K RPK TYKPHTG+LPPY++TR + LFSP PVMP+RK VPK QR P+ S K+ C+ +K Sbjct: 2 NTYATLSYRELQKLCKAHGLTCKGKADELRARLI---AVEXXXXXXXXXPTQERG----EGSSNNDKK-------------TIANGKAQRKSKDDEVDVSV---------------DMPDLIDRPSNAVTWEVELEQGPERFVGRKRQFPTEDSQAGDSDKSSN---SSMDAQGDADSTSEQCEPAMVSTQERSETVPHASEKSQTSGIPATEREPLLKSSTTRATKIHG-------------------TSRLTTSKGALTTREQTSSNVGSKKQAPVSASRPLGLCT-SINRLGSCEERHLLSSAKMAPNKPALKISGCALL------STSEQAKSRPKITYKPHTGRLPPYQETRCIPLFSPYPVMPSRKPGVPKNQRRPTPLPDNSAKHGCDMASKKK 338 The following BLAST results are available for this feature:
BLAST of NO07G01000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01000 ID=NO07G01000|Name=NO07G01000|organism=Nannochloropsis oceanica|type=gene|length=1723bpback to top protein sequence of NO07G01000.1 >NO07G01000.1-protein ID=NO07G01000.1-protein|Name=NO07G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=413bpback to top protein sequence of NO07G01000.2 >NO07G01000.2-protein ID=NO07G01000.2-protein|Name=NO07G01000.2|organism=Nannochloropsis oceanica|type=polypeptide|length=356bpback to top Synonyms
Publications
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