NO07G01000.2, NO07G01000.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G01000.2
Unique NameNO07G01000.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1621
Alignment locationchr7:319393..321115 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:319393..321115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G01000.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01000NO07G01000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G01000.2NO07G01000.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G01000.2.cds1NO07G01000.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G01000.2.cds2NO07G01000.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G01000.2 ID=NO07G01000.2|Name=NO07G01000.2|organism=Nannochloropsis oceanica|type=mRNA|length=1621bp
CCTTATTTCCACTTCCACTACCCCTTGAATTTCCCTTCAACAGACCAAGC
ATCATGGAAAATTCTTACGCCACCCTGAGTTACCGCGACTTACGGAAACT
GTGTAAGACACATGGCCTAATGTGCAAGGGCAAGACAGCGGAGTTGCAGG
CGCGTCTGGTGGCGCATGCGGCAGCAGAGCAGGGGGGGAAAGGAGACCTT
TCTGCCGCTGCACCGCAAGCAGGAACAGACAGTGATGAAGGCGAGGCAGC
GCAGCAGAAGAAGCGGGAGGATAATTTGAGGGGAAAGGTGGAACAATTAG
GCATGGTCATGGATGGTGGAATCGAAAAAGCTGGGCATGCAGACAAGGAG
ACCGTCGCTGCTCCGACAGCTTTTCCTCCTCGAGCCCCTAGGGAAGACAT
GTTCTCAGACATGCCTGACCTCGTGGCCCAGCCTACAGCAGCAGCAGCAG
CAGCAGCAGCAACAACAACAACAACAACAACAGCACTGGAGGCCGTCTCG
GAAATTCAAGAGGCAAAGGAGATGAAAGGCTTCAGGCGCACTGCCATAAA
TGTGATCAAGCGCAAGGCTGAATCGGGCGGGGACGCCCCTGCTGCCTCCA
CCACGAAGAATGGCAGCAACACGACGGCAGCGGAGAGCCATCTCCCAAAG
AAGGTGCCCAAAGTTGTCTCCATGCTTCGTAAGCCCTCGCCTGCCTCTGC
ATCTGCCACACAAGGCATTGCGGCCATGGCAGGAGGAGCAAGTGCAGGAG
CAGGAAGGGCAACGACGACGGCTGCCGCTCCTGTTAGCAGTACCAAGAAG
GCCACGACGATGAAGACAATTTCCTCGAGTCGCACCAGTAACAAGATAAT
TCCCCTTCCCTCCGGCCCGCGGTCCTTTGGCCCTGGCACATTTTCCCTGA
AGAATAACAGTTGCAACAGCAGCGGTCACCATAAGGCCGCCGCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCAAGACTACAATTATCAAGGCTTCTGCTGC
TTCTGCTGATCCTGCACCCTGTGACCCCTCCAAGCCCCGACCAAAGCCCA
CCTACAAACCTCATACTGGCAAGCTCCCCCCTTACAAAGGTAAGATAACC
TTCTCGTCTAACTCCCACTAAATGTCTGGGAACAGTAGAGGCACTTAGGA
GAGGAGACTGATCATTGATGCACTCGAACGCCGATTCACGATGTCATCTG
AACAATAATGAAAGCTTCTTCTCAACGGGAAATTCAAAAGCTTCTTCTTG
GCGTTCGTCATTATATTGATAAGGTTTTATCAGCGATCGTGATCTCACAC
ATTTAACGAATGAACAACACATTAGACACACGGAACGTCTCTCTGTTCTC
GCCGTGTCCTGTTATGCCCGCCCGCAAGGCGAGTGTGCCCAAGCAACAGC
GAGGACCCTCCACCACGACCATCACTTCCAACAAGTACATTTGCAATAGT
GGCATTACTGAAAAATGCACCAACATCCATGGCAAAAACAAGGAAAATAA
CAAGGCCGGGTCCACCACAAGCTACTGAAGGTGTAGAGGAGGGGGTAGGA
GGTTAATTTTGATCGTCGATGCGGGTACAAACCCAAGAGAAACAAAGAAA
CCAGGCACACGTCACGGGCTT
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protein sequence of NO07G01000.2

>NO07G01000.2-protein ID=NO07G01000.2-protein|Name=NO07G01000.2|organism=Nannochloropsis oceanica|type=polypeptide|length=356bp
MENSYATLSYRDLRKLCKTHGLMCKGKTAELQARLVAHAAAEQGGKGDLS
AAAPQAGTDSDEGEAAQQKKREDNLRGKVEQLGMVMDGGIEKAGHADKET
VAAPTAFPPRAPREDMFSDMPDLVAQPTAAAAAAAATTTTTTTALEAVSE
IQEAKEMKGFRRTAINVIKRKAESGGDAPAASTTKNGSNTTAAESHLPKK
VPKVVSMLRKPSPASASATQGIAAMAGGASAGAGRATTTAAAPVSSTKKA
TTMKTISSSRTSNKIIPLPSGPRSFGPGTFSLKNNSCNSSGHHKAAASSS
SSSSSSKTTIIKASAASADPAPCDPSKPRPKPTYKPHTGKLPPYKGKITF
SSNSH*
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mRNA from alignment at chr7:319393..321115+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G01000.2 ID=NO07G01000.2|Name=NO07G01000.2|organism=Nannochloropsis oceanica|type=mRNA|length=1723bp|location=Sequence derived from alignment at chr7:319393..321115+ (Nannochloropsis oceanica)
CCTTATTTCCACTTCCACTACCCCTTGAATTTCCCTTCAACAGACCAAGC
ATCATGGAAAATTCTTACGCCACCCTGAGTTACCGCGACTTACGGAAACT
GTGTAAGACACATGGCCTAATGTGCAAGGGCAAGACAGCGGAGTTGCAGG
CGCGTCTGGTGGCGCATGCGGCAGCAGAGCAGGGGGGGAAAGGAGACCTT
TCTGCCGCTGCACCGCAAGCAGGAACAGACAGTGATGAAGGCGAGGCAGC
GCAGCAGAAGAAGCGGGAGGATAATTTGAGGGGAAAGGTGGAACAATTAG
GCATGGTCATGGATGGTGGAATCGAAAAAGCTGGGCATGCAGACAAGGAG
ACCGTCGCTGCTCCGACAGCTTTTCCTCCTCGAGCCCCTAGGGAAGACAT
GTTCTCAGACATGCCTGACCTCGTGGCCCAGCCTACAGCAGCAGCAGCAG
CAGCAGCAGCAACAACAACAACAACAACAACAGCACTGGAGGCCGTCTCG
GAAATTCAAGAGGCAAAGGAGATGAAAGGCTTCAGGCGCACTGCCATAAA
TGTGATCAAGCGCAAGGCTGAATCGGGCGGGGACGCCCCTGCTGCCTCCA
CCACGAAGAATGGCAGCAACACGACGGCAGCGGAGAGCCATCTCCCAAAG
AAGGTGCCCAAAGTTGTCTCCATGCTTCGTAAGCCCTCGCCTGCCTCTGC
ATCTGCCACACAAGGCATTGCGGCCATGGCAGGAGGAGCAAGTGCAGGAG
CAGGAAGGGCAACGACGACGGCTGCCGCTCCTGTTAGCAGTACCAAGAAG
GCCACGACGATGAAGACAATTTCCTCGAGTCGCACCAGTAACAAGATAGT
AAGTGGACCTTAATTAAACCCCAACCTATCGCTTTATGCCTGCCTCGAAG
CCATACCTTATTTTTTCCACAAAATCCCCCCTTAAATCCCTCCGCTTTAG
ATTCCCCTTCCCTCCGGCCCGCGGTCCTTTGGCCCTGGCACATTTTCCCT
GAAGAATAACAGTTGCAACAGCAGCGGTCACCATAAGGCCGCCGCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCAAGACTACAATTATCAAGGCTTCTGCT
GCTTCTGCTGATCCTGCACCCTGTGACCCCTCCAAGCCCCGACCAAAGCC
CACCTACAAACCTCATACTGGCAAGCTCCCCCCTTACAAAGGTAAGATAA
CCTTCTCGTCTAACTCCCACTAAATGTCTGGGAACAGTAGAGGCACTTAG
GAGAGGAGACTGATCATTGATGCACTCGAACGCCGATTCACGATGTCATC
TGAACAATAATGAAAGCTTCTTCTCAACGGGAAATTCAAAAGCTTCTTCT
TGGCGTTCGTCATTATATTGATAAGGTTTTATCAGCGATCGTGATCTCAC
ACATTTAACGAATGAACAACACATTAGACACACGGAACGTCTCTCTGTTC
TCGCCGTGTCCTGTTATGCCCGCCCGCAAGGCGAGTGTGCCCAAGCAACA
GCGAGGACCCTCCACCACGACCATCACTTCCAACAAGTACATTTGCAATA
GTGGCATTACTGAAAAATGCACCAACATCCATGGCAAAAACAAGGAAAAT
AACAAGGCCGGGTCCACCACAAGCTACTGAAGGTGTAGAGGAGGGGGTAG
GAGGTTAATTTTGATCGTCGATGCGGGTACAAACCCAAGAGAAACAAAGA
AACCAGGCACACGTCACGGGCTT
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Coding sequence (CDS) from alignment at chr7:319393..321115+

>NO07G01000.2 ID=NO07G01000.2|Name=NO07G01000.2|organism=Nannochloropsis oceanica|type=CDS|length=1068bp|location=Sequence derived from alignment at chr7:319393..321115+ (Nannochloropsis oceanica)
ATGGAAAATTCTTACGCCACCCTGAGTTACCGCGACTTACGGAAACTGTG
TAAGACACATGGCCTAATGTGCAAGGGCAAGACAGCGGAGTTGCAGGCGC
GTCTGGTGGCGCATGCGGCAGCAGAGCAGGGGGGGAAAGGAGACCTTTCT
GCCGCTGCACCGCAAGCAGGAACAGACAGTGATGAAGGCGAGGCAGCGCA
GCAGAAGAAGCGGGAGGATAATTTGAGGGGAAAGGTGGAACAATTAGGCA
TGGTCATGGATGGTGGAATCGAAAAAGCTGGGCATGCAGACAAGGAGACC
GTCGCTGCTCCGACAGCTTTTCCTCCTCGAGCCCCTAGGGAAGACATGTT
CTCAGACATGCCTGACCTCGTGGCCCAGCCTACAGCAGCAGCAGCAGCAG
CAGCAGCAACAACAACAACAACAACAACAGCACTGGAGGCCGTCTCGGAA
ATTCAAGAGGCAAAGGAGATGAAAGGCTTCAGGCGCACTGCCATAAATGT
GATCAAGCGCAAGGCTGAATCGGGCGGGGACGCCCCTGCTGCCTCCACCA
CGAAGAATGGCAGCAACACGACGGCAGCGGAGAGCCATCTCCCAAAGAAG
GTGCCCAAAGTTGTCTCCATGCTTCGTAAGCCCTCGCCTGCCTCTGCATC
TGCCACACAAGGCATTGCGGCCATGGCAGGAGGAGCAAGTGCAGGAGCAG
GAAGGGCAACGACGACGGCTGCCGCTCCTGTTAGCAGTACCAAGAAGGCC
ACGACGATGAAGACAATTTCCTCGAGTCGCACCAGTAACAAGATAATTCC
CCTTCCCTCCGGCCCGCGGTCCTTTGGCCCTGGCACATTTTCCCTGAAGA
ATAACAGTTGCAACAGCAGCGGTCACCATAAGGCCGCCGCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCAAGACTACAATTATCAAGGCTTCTGCTGCTTC
TGCTGATCCTGCACCCTGTGACCCCTCCAAGCCCCGACCAAAGCCCACCT
ACAAACCTCATACTGGCAAGCTCCCCCCTTACAAAGGTAAGATAACCTTC
TCGTCTAACTCCCACTAA
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Synonyms
Publications