NO06G04430, NO06G04430 (gene) Nannochloropsis oceanica

Overview
NameNO06G04430
Unique NameNO06G04430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1958
Alignment locationchr6:1244417..1247128 -

Link to JBrowse

Properties
Property NameValue
DescriptionCoproporphyrinogen iii oxidase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1244417..1247128 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
GO:0006779porphyrin-containing compound biosynthetic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004109coproporphyrinogen oxidase activity
GO:0004109coproporphyrinogen oxidase activity
Vocabulary: INTERPRO
TermDefinition
IPR036406Coprogen_oxidase_aer_sf
IPR001260Coprogen_oxidase_aer
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO06G04430 vs. NCBI_GenBank
Match: EWM26442.1 (coproporphyrinogen iii oxidase [Nannochloropsis gaditana])

HSP 1 Score: 510.8 bits (1314), Expect = 4.000e-141
Identity = 275/396 (69.44%), Postives = 303/396 (76.52%), Query Frame = 0
Query:   20 LLLLLLPSLHAFVASPAPSSSSSPAFSSAVKSTHRDINPHAGLS------PATVLDSLVFSSPSPTFDAFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTRDGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDW 410
            +L+ + P    F+  P+ SSSS  +  + +K  HRD+NPH+  S                                 Q++II T+E EDGT   F  D+W RDGG SHGATCVLEGGAFIEKGAVS+SII+G LS ERAA+MS+RGRDLG  ++G V YAAAALSLVLHSANPHLPTFRSDVRYFECQG+GWFGGGADLTPYYLHDGDI AFHALYRGLCDAFD  KALFP+YKKWCDSYF+LPGRQEHRG GGIFFDDLE +EG                XXXXXXXXXXXXX  R FTEAVARSFMPSYL LVRRRRD+ FDE+Q+QWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNH PEEGSEEARLLA+LKTPRDW
Sbjct:   92 ILVCMAPYARPFLL-PSTSSSSPSSLVAPLKGAHRDLNPHSTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQREIIQTIETEDGTDVKFLCDEWERDGGRSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEG--------------GGXXXXXXXXXXXXXXXRMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDW 472          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: CBN73780.1 (coproporphyrinogen oxidase, putative chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 358.6 bits (919), Expect = 2.600e-95
Identity = 198/383 (51.70%), Postives = 240/383 (62.66%), Query Frame = 0
Query:   29 HAFVASPAPSSSSSPAFSSAVKSTHRDINPHAGLSPATVLDSLVFS-SPSPTFDAFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTRDG-GLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDW 410
            H    + +PSSS S     A  +   D  P A  +P+T  D    + S S  F+ FA F+ + Q DI +  E  DG  ATF +D+W R+G     G T VLEGG  +EK A SVS+I GVL+ ERA AMSSRGR    +  GG  Y+AAA+SLV H+A+P +PTFR+DVRY E  G GWFGGGADLTPYYL DGD+  FH  Y+ +CD FD     +PR+KKW D YFY+P R+EHRGVGGIFFDDLE +                                   F   VA  FMPS+L +  RR  EPF +KQRQW L+RRGRYLEFNLLYDRGVKFGL+GGR ES+MVSAPP+ +W YNH PEEGSEE RL+ +L+ PRDW
Sbjct:   34 HQLHNAASPSSSRSSLLLGATATA--DNTPTA--TPSTENDHGGDNRSSSERFENFAEFLVKTQSDICSQAETSDGK-ATFCIDRWEREGASKGFGITRVLEGGELLEKAACSVSVIHGVLTPERAQAMSSRGRS-NIDPAGGQAYSAAAMSLVFHTASPFVPTFRADVRYLEVAGEGWFGGGADLTPYYLDDGDVEGFHRFYKDICDRFD--VEAYPRFKKWADDYFYIPMRKEHRGVGGIFFDDLERI------------------GDAVKGEDAGEEKDVEAFVREVALGFMPSFLPIAERRGREPFSDKQRQWQLMRRGRYLEFNLLYDRGVKFGLSGGRVESIMVSAPPLVSWTYNHVPEEGSEEDRLVKILRKPRDW 390          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: PSC76177.1 (coproporphyrinogen III oxidase [Micractinium conductrix])

HSP 1 Score: 340.5 bits (872), Expect = 7.200e-90
Identity = 172/332 (51.81%), Postives = 218/332 (65.66%), Query Frame = 0
Query:   82 AFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTR---DGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDWA 411
            +F  +I ++Q+ II   E  DG+GA F  D+W R   D    +G T VLEGG+ +EK A ++S++ GVLSKERAAAMSSRGR    +  GG  Y+AAA+SLV HSA+P +PT R+DVR FE  G+ W+GGG DLTP+Y  D D A FHA ++  CDA DP   L+P +K WCD YFY+P R+EHRGVGG+FFDD+E                                    +F   V    +PS+ ++V+RRR EPF + +RQW LLRRGRYLEFNLLYDRGVKFGL G R ES+MVSAPP+ AW+YN QPE GSEEA L+ +L++PRDWA
Sbjct:   52 SFEQYILDLQRRIIEDAEALDGSGAKFVHDRWERSPGDPNAGYGITSVLEGGSVLEKAAANISVVAGVLSKERAAAMSSRGR-AAIDPAGGQPYSAAAMSLVFHSAHPRIPTLRADVRLFEVAGQQWYGGGCDLTPFYPCDQDFAEFHAFWKAACDAHDP--KLYPEFKAWCDRYFYIPARKEHRGVGGLFFDDVEASAA--------------------------AGYDVEQFVRDVGDGILPSWTNIVQRRRAEPFTDAERQWQLLRRGRYLEFNLLYDRGVKFGLDGSRVESIMVSAPPLIAWRYNVQPEAGSEEAALVDLLRSPRDWA 354          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: PRW59768.1 (coproporphyrinogen III oxidase [Chlorella sorokiniana])

HSP 1 Score: 335.1 bits (858), Expect = 3.000e-88
Identity = 167/331 (50.45%), Postives = 218/331 (65.86%), Query Frame = 0
Query:   83 FAAFIQEMQKDIITTLEDEDGTGATFQVDKWTR---DGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDWA 411
            F  +I ++Q+ II + E  DG+GA FQ D+W+R   +    +G T VLEGG+ +EK A ++S++ GVLS ERA AMSSRGR    +  GG  Y+AAA+SLV HSA+P +PT R+DVR FE +G+ W+GGG DLTP+Y+ +GD A FH  ++ LCD  D    L+P +K WCD YF++P R+EHRGVGG+FFDD++                                    +F   V  S +PS++ +V RRR + F + QRQW LLRRGRYLEFNLLYDRGVKFGL GGR ES+MVSAPP+ AWKYN QPE GSEE RL+ +L+ PR+WA
Sbjct:   48 FEEYILDLQQRIIQSAETLDGSGARFQHDRWSRSPSNPNAGYGITSVLEGGSVLEKAAANISVVAGVLSPERAKAMSSRGR-AAIDPAGGQSYSAAAMSLVFHSAHPFIPTLRADVRLFEVEGQMWYGGGCDLTPFYVQEGDFAEFHGFWKALCDRHD--AQLYPEFKAWCDRYFHIPCRKEHRGVGGLFFDDVDAATA---------------------------GYDVEQFVRNVGDSILPSWIPIVERRRGQQFSDAQRQWQLLRRGRYLEFNLLYDRGVKFGLDGGRVESIMVSAPPLIAWKYNVQPEPGSEEERLVQLLQQPREWA 348          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: AEQ18826.1 (coproporphyrinogen III oxidase [Chromera velia])

HSP 1 Score: 328.6 bits (841), Expect = 2.800e-86
Identity = 176/340 (51.76%), Postives = 217/340 (63.82%), Query Frame = 0
Query:   79 TFDAFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTRDGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQGR-GWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGG--------RFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDW 410
            TFD F++F++  Q +I+  LE+ DG G  F  + W+++   S G T VLEGG  IEKGA S S IKGVLS +RA AM  R    G + +GG  Y AAALSLV HS +P +PTFR+DVRYFE +G+ GWFGGGADLTPYYL D D+  FH  ++ +C+ F P    FP  K+ CD YFYLP R+EHRGVGGIFFDDL   E                              +A  FT+AVA  ++ S+L +V RRR   F +++++W L+RRGRYLEFNLLYDRGVKFGLAG         R E+VMVSAPP   WKY H+  EGSEEARL+ VLK PRDW
Sbjct:   81 TFDIFSSFLRRKQAEILNKLEEVDGKG-KFVREPWSQEETGSEGLTAVLEGGDVIEKGACSTSFIKGVLSVDRARAMKQRKGADGWDLKGGETYRAAALSLVFHSRSPLVPTFRADVRYFEVEGKPGWFGGGADLTPYYLFDDDVREFHGFWKEVCNRFSPRS--FPVLKRQCDDYFYLPARREHRGVGGIFFDDLVSFES-------LLGTSETGGDAVEGEQSQSGSREALEFTKAVAEGWLDSWLPIVERRRGLEFTDQEKEWQLIRRGRYLEFNLLYDRGVKFGLAGPAVSTGRPVRVEAVMVSAPPEIKWKYKHEVPEGSEEARLVEVLKKPRDW 410          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: PTQ35612.1 (hypothetical protein MARPO_0070s0075 [Marchantia polymorpha])

HSP 1 Score: 327.4 bits (838), Expect = 6.300e-86
Identity = 171/337 (50.74%), Postives = 215/337 (63.80%), Query Frame = 0
Query:   76 PSPTFDAFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTR--DGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQ-GRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDW 410
            P+ + + F  F+  MQ+ I  T  + DG+G TF  D+W R  D    +G T VLEGG  +EK A +VSI++G LS+ RA AMS RGR      E G QY A ALSLV HS +P +PTFRSD+RYFE + G GWFGGGADLTP YL + D   FH  Y+ +CD +DPT  L+ + K  CD+YFY+P R+EHRG+GGIFFDDLE  +                                  F + VA  FMPSYL + ++RR   + E+QRQW LLRRGRYLEFNLLYDRGVKFGL GGRFES+MVSAPP+ AWKY+ + +  + E++LL VLK+PR W
Sbjct:   77 PAFSREGFEEFLLSMQESICVTAAEADGSGKTFCEDRWQRSEDPKSGYGITRVLEGGDLLEKAAANVSIVRGQLSEARAKAMSGRGR----GVESGAQYFAGALSLVFHSRHPFVPTFRSDIRYFEVEGGGGWFGGGADLTPSYLFEEDAEFFHEYYKAVCDRYDPT--LYQQSKAACDAYFYIPARKEHRGIGGIFFDDLENFQ------------------QYEDSGLLASRSAVFSFVKDVAEGFMPSYLPIAQKRRHLSYGEEQRQWQLLRRGRYLEFNLLYDRGVKFGLDGGRFESIMVSAPPLIAWKYDARVDPDTAESKLLGVLKSPRQW 389          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: XP_005828574.1 (hypothetical protein GUITHDRAFT_164330 [Guillardia theta CCMP2712] >EKX41594.1 hypothetical protein GUITHDRAFT_164330 [Guillardia theta CCMP2712])

HSP 1 Score: 324.3 bits (830), Expect = 5.400e-85
Identity = 175/332 (52.71%), Postives = 209/332 (62.95%), Query Frame = 0
Query:   81 DAFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTRDGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFE-CQGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAG-GRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDWA 411
            D +  FI E Q++I  T    DG  ++F  D+W R  G   G T VLE G   EK A SVS++KG LSKERA AMSSRGR+     E G  Y+A A SLV HSA+P +PTFR+DVR+F+   G GW+GGGADLTPYYL   D   FH+ Y+ +CD  DP    + ++KKWCD YFY+P R+EHRGVGGIFFDDL  M                                   F + VA  FMPSYL +  RRR  PF +KQR W LLRRGRYLEFNLLYDRGVKFGL G GR ES+MVSAPP+ AW+YN +PEEGSEE +L+ VL+ P  WA
Sbjct:   54 DEWEDFILETQENICRTAARADGK-SSFITDRWDRGEGQGFGITRVLEDGNLWEKAACSVSVVKGKLSKERAMAMSSRGRE----AEAGQPYSAIACSLVFHSASPMVPTFRADVRHFQVVGGGGWYGGGADLTPYYLFPEDAKEFHSFYKNICDKHDP--QAYGKFKKWCDDYFYIPARKEHRGVGGIFFDDLAQMSDSSDPLP---------------------------FVKDVADGFMPSYLPIAERRRSTPFTDKQRNWQLLRRGRYLEFNLLYDRGVKFGLDGQGRTESIMVSAPPLIAWRYNVEPEEGSEEQKLVDVLREPIAWA 351          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: XP_013905274.1 (coproporphyrinogen III oxidase [Monoraphidium neglectum] >KIZ06255.1 coproporphyrinogen III oxidase [Monoraphidium neglectum])

HSP 1 Score: 323.9 bits (829), Expect = 7.000e-85
Identity = 164/333 (49.25%), Postives = 216/333 (64.86%), Query Frame = 0
Query:   80 FDAFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTR-DGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGR-DLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDWA 411
            F  F  ++ ++Q+ I+T  E  DG+G  F  D+W+R      +G TCVLEGG  +EK A ++SII G LS +RA AMSSRGR D+  + +GG  Y+AAA+SLV H+A+P +PT R+DVR F+  G  WFGGG DLTP YL + D A FHA ++ +CD + P   ++P +K WCD YFY+P R+EHRG+GG+FFDD+   E                               A  F   V  + +PS+ ++  RRR  P+ + QRQW L RRGRYLEFNLLYDRGVKFGL GGR ES+MVSAPP+ AWKY+ +P+EGS+EARLL VL+ PR+WA
Sbjct:   28 FKGFEKYVLDLQERILTEAEQLDGSGRKFLRDRWSRGSDNAGYGITCVLEGGDLLEKAAANISIIHGQLSPQRAQAMSSRGRADI--DPKGGQPYSAAAMSLVFHAAHPLVPTLRADVRLFQVAGNAWFGGGCDLTPSYLFEEDAAEFHAHWKAVCDKYAP--HVYPDFKAWCDKYFYIPCRKEHRGIGGLFFDDIATGEA---------------------------GYDAEAFVRDVGDNILPSWRAIAERRRRLPYTDSQRQWQLTRRGRYLEFNLLYDRGVKFGLDGGRVESIMVSAPPLIAWKYDVRPDEGSDEARLLDVLRQPREWA 329          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: XP_024397147.1 (uncharacterized protein LOC112292663 [Physcomitrella patens] >PNR39006.1 hypothetical protein PHYPA_019284 [Physcomitrella patens])

HSP 1 Score: 322.4 bits (825), Expect = 2.000e-84
Identity = 171/339 (50.44%), Postives = 207/339 (61.06%), Query Frame = 0
Query:   74 SSPSPTFDAFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTR--DGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQG-RGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDW 410
            S P+ T + F AF+  +Q  I       DG+G  F  DKW R  D    +G T VLEGG  +EK A +VSI++G LS+ RA AMS+RGR      E G  Y A ALSLV H  NP++PTFRSD+RYF  +G +GWFGGGADLTP YL + D  +FHA Y+ +CD + P  +L+   K  CD+YFY+P R+EHRG GGIFFDDLE  +                                  F   VA+ FMPSYL L  RRR     E +RQW LLRRGRYLEFNLLYDRGVKFGL GGR ES+MVSAPP+ AWKY+  PE GS EA L+ +L+ PR W
Sbjct:   99 SRPAFTQEEFEAFLVNLQSSICDEAATADGSGKMFGFDKWQRGADPSNGYGITRVLEGGDLLEKAAANVSIVRGSLSEARAKAMSARGR----GVEAGASYFAGALSLVFHPRNPYVPTFRSDIRYFVVEGSQGWFGGGADLTPCYLFEEDARSFHAFYKSICDKYSP--SLYEESKAACDAYFYIPARKEHRGTGGIFFDDLETFQ------------KDSDQTANGGASEEPDTDAVFAFVRDVAQGFMPSYLPLANRRRTIAHGEAERQWQLLRRGRYLEFNLLYDRGVKFGLDGGRIESIMVSAPPLVAWKYDVAPEPGSREAELVKILQNPRSW 419          
BLAST of NO06G04430 vs. NCBI_GenBank
Match: PNH11399.1 (Coproporphyrinogen-III oxidase [Tetrabaena socialis])

HSP 1 Score: 320.9 bits (821), Expect = 5.900e-84
Identity = 171/360 (47.50%), Postives = 214/360 (59.44%), Query Frame = 0
Query:   56 INPHAGLSPATVLDSLVFSSP---SPTFDAFAAFIQEMQKDIITTLEDEDGTGATFQVDKWTRDGG---LSHGATCVLEGGAFIEKGAVSVSIIKGVLSKERAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFECQGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWCDSYFYLPGRQEHRGVGGIFFDDLEGMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLLAVLKTPRDW 410
            +  H  L    +L     S+P   + TFD F  +I ++Q  II T E  +     F VD+W R  G     +G TCVLEGG  +EK AV++S+++G L+  RA AMSSRGR    +  GG  YAAAALSLV HSA+P +PT R+DVR F+     W+GGG DLTP Y+ + D   FH  ++ +CD + P  +L+   K+WCD YFY+P R+EHRGVGG+FFDDL   E                                  F   V    + S+  LV+RRR  PF E+QRQW LLRRGRYLEFNLLYDRGVKFGL GGRFES+MVSAPP+ AWKYN  P  GS E   LAVL+TPR+W
Sbjct:   20 VGQHRPLRRGPLLPCAAASAPARAATTFDTFVEYILDLQSRIIATGESLELGKKQFVVDRWERQPGNPNAGYGVTCVLEGGEVLEKAAVNISVLRGTLTAARAGAMSSRGRG-SIDPAGGQAYAAAALSLVFHSAHPLIPTLRADVRLFQVADEAWYGGGCDLTPSYVDEADATDFHRFWKAVCDNYKP--SLYGELKEWCDRYFYIPARKEHRGVGGLFFDDLSSAEA---------------------------GYDVEAFVRQVGDGILDSWTPLVQRRRGTPFTEEQRQWQLLRRGRYLEFNLLYDRGVKFGLDGGRFESIMVSAPPLIAWKYNVTPLPGSPEDETLAVLRTPREW 349          
The following BLAST results are available for this feature:
BLAST of NO06G04430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26442.14.000e-14169.44coproporphyrinogen iii oxidase [Nannochloropsis ga... [more]
CBN73780.12.600e-9551.70coproporphyrinogen oxidase, putative chloroplast p... [more]
PSC76177.17.200e-9051.81coproporphyrinogen III oxidase [Micractinium condu... [more]
PRW59768.13.000e-8850.45coproporphyrinogen III oxidase [Chlorella sorokini... [more]
AEQ18826.12.800e-8651.76coproporphyrinogen III oxidase [Chromera velia][more]
PTQ35612.16.300e-8650.74hypothetical protein MARPO_0070s0075 [Marchantia p... [more]
XP_005828574.15.400e-8552.71hypothetical protein GUITHDRAFT_164330 [Guillardia... [more]
XP_013905274.17.000e-8549.25coproporphyrinogen III oxidase [Monoraphidium negl... [more]
XP_024397147.12.000e-8450.44uncharacterized protein LOC112292663 [Physcomitrel... [more]
PNH11399.15.900e-8447.50Coproporphyrinogen-III oxidase [Tetrabaena sociali... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL088nonsL088Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR049ncniR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR144ngnoR144Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000020NSK000020Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04430.2NO06G04430.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G04430.1NO06G04430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|252259gene_9616Nannochloropsis oceanica (N. oceanica CCMP1779)gene
CPX2gene4085Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04430.2NO06G04430.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G04430.1NO06G04430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04430 ID=NO06G04430|Name=NO06G04430|organism=Nannochloropsis oceanica|type=gene|length=1958bp
AAAACAATCTCTAGGACAATGGGGCCGTCAAGAACAGTAGGGGCCAGACT
TTCAAGTAGATGGCGTTTTCATCATCTCCTTCTCCTCCTCCTGCCCTCTC
TTCACGCCTTCGTAGCCTCCCCTGCTCCCTCCTCCTCCTCCTCTCCTGCT
TTTTCCTCGGCAGTCAAAAGTACACACCGAGACATCAACCCGCATGCAGG
TCTGTCCCCCGCCACCGTCCTTGACTCCCTTGTCTTCTCCTCCCCGTCCC
CGACGTTTGATGCCTTCGCCGCATTCATTCAAGAGATGCAAAAGGACATT
ATCACTACGCTTGAGgtaggctgattgcaggggaacgagacagggcgcgg
ataacgacgacagtgaaaggcacaccaataggggtcgcatggaacttgcg
aaagaaggaggagaagaagaagaagaagtagaagaagaggatagaggaat
acggaaaggcctcgaatagagattaatatcatgagatgagggtggggagg
ttgcaggggcgctcccgtggatggcggtgtgtgttattggagtggcatat
gtaatcttttcttggcacaagcactcacaccacctgacttccgtcttccc
ctctccctctctcttccatccgcagGACGAAGACGGCACTGGTGCCACCT
TCCAAGTCGACAAGTGGACGCGTGACGGGGGATTAAGTCATGGAGCCACC
TGCGTATTGGAAGGCGGGGCGTTCATCGAAAAAGGCGCTGTCAGTGTCTC
CATTATCAAGGGCGTCCTTTCCAAGGAGAGGGCCGCCGCTATGAGCTCCA
Ggtgcgtgcttcctcctctcctcccttcatacctccttccctctcttttc
ccttcagatatctctctaaacacatcacgatttctctctgtctctgtctg
tgtgtctctctgtcactctatctgtcggtctccttccctctctccctctt
tctcacccatccaaccaatccccctttccgttctttctcctcccccctca
tcttctccttcactaaagAGGGCGAGACCTCGGCGGCAACACGGAGGGAG
GGGTGCAGTACGCCGCCGCCGCCTTGTCCCTCGTCCTCCATTCGGCCAAC
CCCCATCTGCCAACGTTTAGGAGCGATGTCCGTTATTTTGAGTGCCAGgt
ggggagagagggagggagggagggagggagggagggagggaggggccggg
taagaaaacacaggcgcccagaaaaggaatcactcgattactatcttctg
gcccgtggattaacacccctcccccctccttccatccttccctcccaacc
tctctctttatcaacgcagGGCAGGGGCTGGTTCGGCGGCGGGGCGGACC
TGACTCCCTACTATCTCCACGACGGGGATATCGCCGCCTTCCACGCCCTC
TATCGCGGCCTCTGTGATGCCTTCGACCCCACCAAGgtcagcccctcgct
ccctccctccctcctccccttccttccctggccctctccttccgtctctc
tcattcatttccccaagtgacaaggaatgcgacgccgtcttctacctatt
cagcctcccccccctccctcccccctccctccccccctccctccccccct
ccctcagGCCCTCTTTCCCAGGTACAAGAAGTGGTGCGACTCCTACTTCT
ACCTACCCGGAAGACAAGAACACCGAGGTGTCGGCGGAATCTTCTTCGAT
GACCTGGAGGGGATGGAGGGAGGGATGGAGGAAGGAGCGGAGGGGAAGGA
GGAGGAAAAGGAGGAGGAGGAGAGAGGGGGGGAAGGACGGAAGGAGGGAA
GGGTGGAGAAGGCGAGGAGATTTACGGAGGCGGTGGCCCGTAGTTTCATG
CCCAGCTATTTATCGCGTGAGTGTGCTGTGCTGGTTATATTGGTTTGAGT
TGGGGTGGAATATGAAAACCGTCGCCCTCCCTCCCTTCCTCCCTGCCTCC
TTCCCTTT
back to top

protein sequence of NO06G04430.2

>NO06G04430.2-protein ID=NO06G04430.2-protein|Name=NO06G04430.2|organism=Nannochloropsis oceanica|type=polypeptide|length=337bp
MGPSRTVGARLSSRWRFHHLLLLLLPSLHAFVASPAPSSSSSPAFSSAVK
STHRDINPHAGLSPATVLDSLVFSSPSPTFDAFAAFIQEMQKDIITTLED
EDGTGATFQVDKWTRDGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKE
RAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFEC
QGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWC
DSYFYLPGRQEHRGVGGIFFDDLEGMEGGMEEGAEGKEEEKEEEERGGEG
RKEGRVEKARRFTEAVARSFMPSYLSRECAVLVILV*
back to top

protein sequence of NO06G04430.1

>NO06G04430.1-protein ID=NO06G04430.1-protein|Name=NO06G04430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bp
MGPSRTVGARLSSRWRFHHLLLLLLPSLHAFVASPAPSSSSSPAFSSAVK
STHRDINPHAGLSPATVLDSLVFSSPSPTFDAFAAFIQEMQKDIITTLED
EDGTGATFQVDKWTRDGGLSHGATCVLEGGAFIEKGAVSVSIIKGVLSKE
RAAAMSSRGRDLGGNTEGGVQYAAAALSLVLHSANPHLPTFRSDVRYFEC
QGRGWFGGGADLTPYYLHDGDIAAFHALYRGLCDAFDPTKALFPRYKKWC
DSYFYLPGRQEHRGVGGIFFDDLEGMEGGMEEGAEGKEEEKEEEERGGEG
RKEGRVEKARRFTEAVARSFMPSYLSLVRRRRDEPFDEKQRQWMLLRRGR
YLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHQPEEGSEEARLL
AVLKTPRDWA*
back to top
Synonyms
Publications