NO06G04210, NO06G04210 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04210 vs. NCBI_GenBank
Match: EWM26409.1 (Ribosome-associated, Iojap [Nannochloropsis gaditana]) HSP 1 Score: 314.7 bits (805), Expect = 3.500e-82 Identity = 195/276 (70.65%), Postives = 224/276 (81.16%), Query Frame = 0
Query: 12 KRRRDLHTSPPLAVTTTCMSLIVLGLV-LPMAPAFVLPFSSSIVPSANSHQLYSSPLFLPSRTQTTLYATGSELPPQRQKQKKGGREGYNKSRRREDALSGMNVGQRFEMGYDIEDETVPLEQDDALPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEKHGMEARNGGEGTADSGWILLDFGSVVVNVMTPVARKYYALEKLWKKGEEVDLSHILKPNAXXXXXXXXXXXXXXXXXXXXXXXXLIEDAFW 287
+RR D SPP+ TT + L +L L P AF LP P++ + S+ + R Q++LY++ S PQR KQKKGGREGYN++RRRE+AL GM VG RFEMGYDIE+ETVPL +D+ LP+IETIA+AADMRKGEDV A+RVS LTTVSSFFVLVSGNSRPQIQAIAGAIE+DM+EKHG+E RNGGEGTADSGWILLD+GSVVVNVMTPVARK+YALEKLWK GEEVDLSHIL+PN XXXXXXXXXXXXXXXXXXXXXX L+EDAFW
Sbjct: 12 QRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNGEEVDLSHILRPN--XXXXXXXXXXXXXXXXXXXXXXSLMEDAFW 285
BLAST of NO06G04210 vs. NCBI_GenBank
Match: EWM26410.1 (Ribosome-associated, Iojap [Nannochloropsis gaditana]) HSP 1 Score: 288.9 bits (738), Expect = 2.100e-74 Identity = 155/230 (67.39%), Postives = 182/230 (79.13%), Query Frame = 0
Query: 12 KRRRDLHTSPPLAVTTTCMSLIVLGLV-LPMAPAFVLPFSSSIVPSANSHQLYSSPLFLPSRTQTTLYATGSELPPQRQKQKKGGREGYNKSRRREDALSGMNVGQRFEMGYDIEDETVPLEQDDALPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEKHGMEARNGGEGTADSGWILLDFGSVVVNVMTPVARKYYALEKLWK 241
+RR D SPP+ TT + L +L L P AF LP P++ + S+ + R Q++LY++ S PQR KQKKGGREGYN++RRRE+AL GM VG RFEMGYDIE+ETVPL +D+ LP+IETIA+AADMRKGEDV A+RVS LTTVSSFFVLVSGNSRPQIQAIAGAIE+DM+EKHG+E RNGGEGTADSGWILLD+GSVVVNVMTPVARK+YALEKLWK
Sbjct: 12 QRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWK 241
BLAST of NO06G04210 vs. NCBI_GenBank
Match: XP_005855870.1 (iojap-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20495.1 iojap-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 182.2 bits (461), Expect = 2.700e-42 Identity = 106/175 (60.57%), Postives = 127/175 (72.57%), Query Frame = 0
Query: 12 KRRRDLHTSPPLAVTTTCMSLIVLGLV-LPMAPAFVLPFSSSIVPSANSHQLYSSPLFLPSRTQTTLYATGSELPPQRQKQKKGGREGYNKSRRREDALSGMNVGQRFEMGYDIEDETVPLEQDDALPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIA 186
+RR D SPP TT + L +L L P AF LP P++ + S+ + R Q++LY++ S PQR KQKKGGREGYN++RRRE+AL GM VG RFEMGYDIE+ETVPL +D+ LP+IETIA+AADMRKGEDV A+RVS LTTVSSFFVLVSGNSRPQIQAIA
Sbjct: 12 QRRIDGDISPPNTTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIA 186
BLAST of NO06G04210 vs. NCBI_GenBank
Match: XP_005840038.1 (hypothetical protein GUITHDRAFT_161153 [Guillardia theta CCMP2712] >EKX53058.1 hypothetical protein GUITHDRAFT_161153 [Guillardia theta CCMP2712]) HSP 1 Score: 127.9 bits (320), Expect = 6.100e-26 Identity = 62/126 (49.21%), Postives = 86/126 (68.25%), Query Frame = 0
Query: 130 PLEQDDALPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEKHGMEARNGGEGTADSGWILLDFGSVVVNVMTPVARKYYALEKLWKKGEEVDLSHILKPNA 256
PL +D +LPL++ I A D RK E ++A RVS LT + FF+ G+SRP +QAIA +ED M EK+G E + +G DSGWILLD+G V+VN+MT AR++Y LE+ W+ GE V L ++ PN+
Sbjct: 58 PLAEDPSLPLVQDIIRAMDERKAESIWAARVSHLTYSTEFFINCQGSSRPMLQAIAANVEDIMNEKYGREIK--WQGNPDSGWILLDYGEVIVNIMTAAAREFYDLEEHWQNGELVPLEDLVTPNS 181
BLAST of NO06G04210 vs. NCBI_GenBank
Match: CBN77507.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 124.4 bits (311), Expect = 6.800e-25 Identity = 60/124 (48.39%), Postives = 82/124 (66.13%), Query Frame = 0
Query: 131 LEQDDALPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEKHGMEARNGGEGTADSGWILLDFGSVVVNVMTPVARKYYALEKLWKKGEEVDLSHILKPN 255
+E D LP + T AAD RK ++ AIRV++LT ++ F V++ GNSRPQ QAIA IE+ M E H + + +G +SGWILLD+G ++V++MTP +R YY LE W GE V L +LKPN
Sbjct: 32 MEDDPTLPEVLTAVKAADERKAGNIVAIRVATLTVMTEFMVVLEGNSRPQNQAIAQNIEEKMEEMH--QRKTKSQGAPESGWILLDYGDIIVHIMTPKSRSYYDLESFWSNGERVPLDGVLKPN 153
BLAST of NO06G04210 vs. NCBI_GenBank
Match: OEU12337.1 (DUF143-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 123.2 bits (308), Expect = 1.500e-24 Identity = 65/131 (49.62%), Postives = 91/131 (69.47%), Query Frame = 0
Query: 129 VPLEQDDALPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEKHGM--EARNGGEGTADSGWILLDFGSVVVNVMTPVARKYYALEKLWKK--GEEVDLSHILKPNA 256
VP EQD+ L+ I AD RK +++ A+RVS ++TV+SF V+V+GNSRPQ QAIA I+DD+ E+ + A EG+ADSGW LLD+GSV+V+VMTP +R +Y +E WK GE +D++ + PNA
Sbjct: 21 VPPEQDELAELVRCIVRGADGRKADNIVAMRVSKISTVTSFVVIVTGNSRPQNQAIAAVIKDDVNEEFALLPGATGVPEGSADSGWTLLDYGSVMVHVMTPKSRLFYNIEGKWKDQGGEIMDITAAILPNA 151
BLAST of NO06G04210 vs. NCBI_GenBank
Match: GAX16758.1 (hypothetical protein FisN_21Hh205 [Fistulifera solaris]) HSP 1 Score: 120.6 bits (301), Expect = 9.800e-24 Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 0
Query: 120 MGYDIEDETVPLEQDDA-LPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEKHGMEARNGG--EGTADSGWILLDFGSVVVNVMTPVARKYYALEKLWKK--GEEVDLSHILKPN 255
M + D+ + D+ LPL+E I AAD RK ED+ A++V+ ++T++S V+VSGNSRPQ QAIA AI D+ ++ G G EG+A+SGWILLD+GSV+V++MTP +R YY +E WK+ G ++ ++L PN
Sbjct: 77 MSSTVGDDKYSINTDETLLPLLECIVKAADGRKAEDIVALQVNHVSTLTSVLVIVSGNSRPQNQAIAAAITRDVQDELGQRPGGNGVPEGSAESGWILLDYGSVMVHIMTPKSRLYYNVEGQWKEKGGVATNIDYLLIPN 216
BLAST of NO06G04210 vs. NCBI_GenBank
Match: CEM31303.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 120.2 bits (300), Expect = 1.300e-23 Identity = 60/130 (46.15%), Postives = 87/130 (66.92%), Query Frame = 0
Query: 125 EDETVPLEQDDALPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEKHGMEARNGGEGTADSGWILLDFGSVVVNVMTPVARKYYALEKLWKK--GEEVDLSHILK 253
E E P+ D +P I TIA A D+ K + + A+RV + V+ F VL+ G+S PQ +AIA AIED M KHG+EA+ +G+ D GW++LD+GS++VN+MTP R+YY +E W+K E V L+H+L+
Sbjct: 28 EREADPVSHDPQVPTIYTIAEAGDLHKADGISAMRVKYCSDVTDFIVLMHGHSVPQNKAIANAIEDAMARKHGIEAKR-RDGSVDGGWLVLDYGSILVNIMTPKKREYYNMEGHWRKQGSEPVPLAHVLR 156
BLAST of NO06G04210 vs. NCBI_GenBank
Match: GAX10502.1 (hypothetical protein FisN_21Lh205 [Fistulifera solaris]) HSP 1 Score: 119.8 bits (299), Expect = 1.700e-23 Identity = 63/140 (45.00%), Postives = 95/140 (67.86%), Query Frame = 0
Query: 120 MGYDIEDETVPLEQDDA-LPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIEDDMMEKHGMEARNGG--EGTADSGWILLDFGSVVVNVMTPVARKYYALEKLWKK--GEEVDLSHILKPN 255
M + D+ + D+ LPL+E I AAD RK ED+ A++V+ ++T++S V+VSGNSRPQ QAIA AI D+ ++ G G EG+A+SGWILLD+G+V+V++MTP +R YY +E WK+ G +++ ++L PN
Sbjct: 77 MSSTVGDDEYSINTDETLLPLLECIVKAADGRKAEDIVALQVNHVSTLTSVLVIVSGNSRPQNQAIAAAITRDVQDELGQRPGGNGVPEGSAESGWILLDYGNVMVHIMTPKSRLYYNVEGQWKEKGGVAMNIDYLLIPN 216
BLAST of NO06G04210 vs. NCBI_GenBank
Match: XP_005537723.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM81687.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 104.8 bits (260), Expect = 5.600e-19 Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = 0
Query: 133 QDDALPLIETIANAADMRKGEDVYAIRVSSLTTVSSFFVLVSGNSRPQIQAIAGAIED---DMMEKHGMEARNGGEGTA---DSGWILLDFGSVVVNVMTPVARKYYALEKLWKKGEEVDLSHIL 252
+D ++PL+ AAD RK +++ AIRVS LT V+SFFV +G SR QI AIA IE+ +++ + + A G + SGW+ +D+G V+VN+M+P AR YY ++ LW +GE VD+ +L
Sbjct: 142 EDPSMPLVRVCLEAADERKAQELTAIRVSHLTYVTSFFVFATGLSRTQISAIARRIEERVAEVLSRKPLSASFRGVNASPPGQSGWVTIDYGEVIVNIMSPEARSYYDMDTLWGRGEAVDVDRVL 266 The following BLAST results are available for this feature:
BLAST of NO06G04210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04210 ID=NO06G04210|Name=NO06G04210|organism=Nannochloropsis oceanica|type=gene|length=2250bpback to top protein sequence of NO06G04210.1 >NO06G04210.1-protein ID=NO06G04210.1-protein|Name=NO06G04210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bpback to top Synonyms
Publications
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