NO06G04190, NO06G04190 (gene) Nannochloropsis oceanica

Overview
NameNO06G04190
Unique NameNO06G04190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1694
Alignment locationchr6:1168207..1169900 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1168207..1169900 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G04190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000055NSK000055Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04190.1NO06G04190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04190.1NO06G04190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04190 ID=NO06G04190|Name=NO06G04190|organism=Nannochloropsis oceanica|type=gene|length=1694bp
ACAGTGCTATGTACGGCATCTCCAATCTTCAGGATTTGGTGGGCTTGGTC
AAGGAGAAGGGGAGTGAGTTGGCAGCTGAAGGGAAACTCTTCGCAGACCG
CCTCTCCCTGGACCGACTCCAGGAGGAAGGTGGGGGACAAGCAGCTAGAG
CAGGCGGAGGGAAAAGCAGCGGCACATCGGCAGTCTCTCAAGAGgtaggg
tcacttacatctaagtcttgcgctgttatgcttctgcctagaccacaaga
cattcataatcctcacacctccctcccccccttcctccccccctctctcc
cctcttgcctttctcaaacagCAGAACTTTCTCCCTCCACGACCGGACAT
CTACTCCGCGGCCGCCGTAGCACGAGCCCGTGAAATGAACGTGATTGCCG
CTGCTCCCTCCCGCCCTTCCCCCCTTCCTTCCTCTCTTCCTCCAGCCCGC
CCTGCACCCCTCCCTCCTCCTTCCATCGCGGCGGAGGAGGGGAAGCGAGG
GAACGGGAACGCGGGAGGGAGGTCGGGGAGGAGGGAGGAGGAGGATAATG
AGGACGAAAACGATCCCATCATGGCGGCTATTCGAGGAGGGAGGGAGGGA
GGGAGGAAGGGAGGGAGGGAGGAGGAGGAGGAGGAGGAGGTGGACGTCGA
GGCGGCAGTGGCCGAATCCCTGGCGTTCCTGAACAAGAAGCAGCCGGCAG
CAGGGGCAGGAGTATCACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGA
GGAGGAGGAGAAGAAGAAGGAGGGAAATGGGAGGGAGGAAAGGGTGGGGT
GGGTGAGTGGGCGGGGAGGGTGAGGAGTGAGTTCTGGGGCACCGTGGGCA
AGGCGATGGGACAGCCATGGGGAGGAGGAGGGGGAGGAGGAGGGGGAGGG
GGAGGAGGAGGAGGAGGGGGAGGGAAAGGGAATGAGGGAGGAGGGAAGTG
GGGGCATGTGAATGATGGTGGCGGTGGAGGAGGGAGAGGAGCAGCAGCAG
CAGGGGAGGTGGAAGTAGTCAGGATACAGGGACGTGAGGTTCTCACAGAG
GAAGAGgtaagtgtcatcctccctccctccctccctgccttctcccctcc
ttcgacactatccaatttgaaaccatccctccttccctccttccctccat
ccctccctccctccttccctccttccctccttccttccttccctccctca
gCGTCGACACCTTGCCGCCCTCCAAGGAGGGCACCACGGCGGCTTCTTTA
CTTCCCTCTTCGGTTTCACAGGGGCAGGAGGAGGAGGAGGTGGAGGAGGA
GGGAGCTCGGCGGCTTTTTTCGTTCTTCCCACCTCGTCCTCGTCCTCGAC
CTCGGGTAGGCAAGTGATGCGGCCGGTGCCGATGCGAGGGACTGTGGGAG
CTGGAGCAGGGAGTCGCCTTCGATTGGGCTGGAAAATGCGAGgtagggaa
ggagggagaatggagggtcgaagggagggaggagggaagtgggaaggggg
gagggaggaaagacatatgttatctttacacataattgctttactgagtc
atttttcctcgctcccgctcccccctttttaatccctctacccctccttt
ctcctttaatccctttttctcatcgtcggtagTGGTCATGCTGGTGATGG
GTGCGCTCATTATCTGGTGGGTAGCTTTCAAGAAGGAGGAATAG
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protein sequence of NO06G04190.1

>NO06G04190.1-protein ID=NO06G04190.1-protein|Name=NO06G04190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MYGISNLQDLVGLVKEKGSELAAEGKLFADRLSLDRLQEEGGGQAARAGG
GKSSGTSAVSQEQNFLPPRPDIYSAAAVARAREMNVIAAAPSRPSPLPSS
LPPARPAPLPPPSIAAEEGKRGNGNAGGRSGRREEEDNEDENDPIMAAIR
GGREGGRKGGREEEEEEEVDVEAAVAESLAFLNKKQPAAGAGVSRGGGGG
GGGGRGGGEEEGGKWEGGKGGVGEWAGRVRSEFWGTVGKAMGQPWGGGGG
GGGGGGGGGGGGGKGNEGGGKWGHVNDGGGGGGRGAAAAGEVEVVRIQGR
EVLTEEERRHLAALQGGHHGGFFTSLFGFTGAGGGGGGGGGSSAAFFVLP
TSSSSSTSGRQVMRPVPMRGTVGAGAGSRLRLGWKMRVVMLVMGALIIWW
VAFKKEE*
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Synonyms
Publications