NO06G04190.1, NO06G04190.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G04190.1
Unique NameNO06G04190.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1232
Alignment locationchr6:1168207..1169900 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1168207..1169900 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G04190.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G04190NO06G04190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G04190.1NO06G04190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G04190.1.cds1NO06G04190.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04190.1.cds2NO06G04190.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04190.1.cds3NO06G04190.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04190.1.cds4NO06G04190.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G04190.1 ID=NO06G04190.1|Name=NO06G04190.1|organism=Nannochloropsis oceanica|type=mRNA|length=1232bp
ACAGTGCTATGTACGGCATCTCCAATCTTCAGGATTTGGTGGGCTTGGTC
AAGGAGAAGGGGAGTGAGTTGGCAGCTGAAGGGAAACTCTTCGCAGACCG
CCTCTCCCTGGACCGACTCCAGGAGGAAGGTGGGGGACAAGCAGCTAGAG
CAGGCGGAGGGAAAAGCAGCGGCACATCGGCAGTCTCTCAAGAGCAGAAC
TTTCTCCCTCCACGACCGGACATCTACTCCGCGGCCGCCGTAGCACGAGC
CCGTGAAATGAACGTGATTGCCGCTGCTCCCTCCCGCCCTTCCCCCCTTC
CTTCCTCTCTTCCTCCAGCCCGCCCTGCACCCCTCCCTCCTCCTTCCATC
GCGGCGGAGGAGGGGAAGCGAGGGAACGGGAACGCGGGAGGGAGGTCGGG
GAGGAGGGAGGAGGAGGATAATGAGGACGAAAACGATCCCATCATGGCGG
CTATTCGAGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAGGAG
GAGGAGGAGGAGGTGGACGTCGAGGCGGCAGTGGCCGAATCCCTGGCGTT
CCTGAACAAGAAGCAGCCGGCAGCAGGGGCAGGAGTATCACGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGAAGAAGAAGGAGGGAAA
TGGGAGGGAGGAAAGGGTGGGGTGGGTGAGTGGGCGGGGAGGGTGAGGAG
TGAGTTCTGGGGCACCGTGGGCAAGGCGATGGGACAGCCATGGGGAGGAG
GAGGGGGAGGAGGAGGGGGAGGGGGAGGAGGAGGAGGAGGGGGAGGGAAA
GGGAATGAGGGAGGAGGGAAGTGGGGGCATGTGAATGATGGTGGCGGTGG
AGGAGGGAGAGGAGCAGCAGCAGCAGGGGAGGTGGAAGTAGTCAGGATAC
AGGGACGTGAGGTTCTCACAGAGGAAGAGCGTCGACACCTTGCCGCCCTC
CAAGGAGGGCACCACGGCGGCTTCTTTACTTCCCTCTTCGGTTTCACAGG
GGCAGGAGGAGGAGGAGGTGGAGGAGGAGGGAGCTCGGCGGCTTTTTTCG
TTCTTCCCACCTCGTCCTCGTCCTCGACCTCGGGTAGGCAAGTGATGCGG
CCGGTGCCGATGCGAGGGACTGTGGGAGCTGGAGCAGGGAGTCGCCTTCG
ATTGGGCTGGAAAATGCGAGTGGTCATGCTGGTGATGGGTGCGCTCATTA
TCTGGTGGGTAGCTTTCAAGAAGGAGGAATAG
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protein sequence of NO06G04190.1

>NO06G04190.1-protein ID=NO06G04190.1-protein|Name=NO06G04190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MYGISNLQDLVGLVKEKGSELAAEGKLFADRLSLDRLQEEGGGQAARAGG
GKSSGTSAVSQEQNFLPPRPDIYSAAAVARAREMNVIAAAPSRPSPLPSS
LPPARPAPLPPPSIAAEEGKRGNGNAGGRSGRREEEDNEDENDPIMAAIR
GGREGGRKGGREEEEEEEVDVEAAVAESLAFLNKKQPAAGAGVSRGGGGG
GGGGRGGGEEEGGKWEGGKGGVGEWAGRVRSEFWGTVGKAMGQPWGGGGG
GGGGGGGGGGGGGKGNEGGGKWGHVNDGGGGGGRGAAAAGEVEVVRIQGR
EVLTEEERRHLAALQGGHHGGFFTSLFGFTGAGGGGGGGGGSSAAFFVLP
TSSSSSTSGRQVMRPVPMRGTVGAGAGSRLRLGWKMRVVMLVMGALIIWW
VAFKKEE*
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mRNA from alignment at chr6:1168207..1169900-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G04190.1 ID=NO06G04190.1|Name=NO06G04190.1|organism=Nannochloropsis oceanica|type=mRNA|length=1694bp|location=Sequence derived from alignment at chr6:1168207..1169900- (Nannochloropsis oceanica)
ACAGTGCTATGTACGGCATCTCCAATCTTCAGGATTTGGTGGGCTTGGTC
AAGGAGAAGGGGAGTGAGTTGGCAGCTGAAGGGAAACTCTTCGCAGACCG
CCTCTCCCTGGACCGACTCCAGGAGGAAGGTGGGGGACAAGCAGCTAGAG
CAGGCGGAGGGAAAAGCAGCGGCACATCGGCAGTCTCTCAAGAGGTAGGG
TCACTTACATCTAAGTCTTGCGCTGTTATGCTTCTGCCTAGACCACAAGA
CATTCATAATCCTCACACCTCCCTCCCCCCCTTCCTCCCCCCCTCTCTCC
CCTCTTGCCTTTCTCAAACAGCAGAACTTTCTCCCTCCACGACCGGACAT
CTACTCCGCGGCCGCCGTAGCACGAGCCCGTGAAATGAACGTGATTGCCG
CTGCTCCCTCCCGCCCTTCCCCCCTTCCTTCCTCTCTTCCTCCAGCCCGC
CCTGCACCCCTCCCTCCTCCTTCCATCGCGGCGGAGGAGGGGAAGCGAGG
GAACGGGAACGCGGGAGGGAGGTCGGGGAGGAGGGAGGAGGAGGATAATG
AGGACGAAAACGATCCCATCATGGCGGCTATTCGAGGAGGGAGGGAGGGA
GGGAGGAAGGGAGGGAGGGAGGAGGAGGAGGAGGAGGAGGTGGACGTCGA
GGCGGCAGTGGCCGAATCCCTGGCGTTCCTGAACAAGAAGCAGCCGGCAG
CAGGGGCAGGAGTATCACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGA
GGAGGAGGAGAAGAAGAAGGAGGGAAATGGGAGGGAGGAAAGGGTGGGGT
GGGTGAGTGGGCGGGGAGGGTGAGGAGTGAGTTCTGGGGCACCGTGGGCA
AGGCGATGGGACAGCCATGGGGAGGAGGAGGGGGAGGAGGAGGGGGAGGG
GGAGGAGGAGGAGGAGGGGGAGGGAAAGGGAATGAGGGAGGAGGGAAGTG
GGGGCATGTGAATGATGGTGGCGGTGGAGGAGGGAGAGGAGCAGCAGCAG
CAGGGGAGGTGGAAGTAGTCAGGATACAGGGACGTGAGGTTCTCACAGAG
GAAGAGGTAAGTGTCATCCTCCCTCCCTCCCTCCCTGCCTTCTCCCCTCC
TTCGACACTATCCAATTTGAAACCATCCCTCCTTCCCTCCTTCCCTCCAT
CCCTCCCTCCCTCCTTCCCTCCTTCCCTCCTTCCTTCCTTCCCTCCCTCA
GCGTCGACACCTTGCCGCCCTCCAAGGAGGGCACCACGGCGGCTTCTTTA
CTTCCCTCTTCGGTTTCACAGGGGCAGGAGGAGGAGGAGGTGGAGGAGGA
GGGAGCTCGGCGGCTTTTTTCGTTCTTCCCACCTCGTCCTCGTCCTCGAC
CTCGGGTAGGCAAGTGATGCGGCCGGTGCCGATGCGAGGGACTGTGGGAG
CTGGAGCAGGGAGTCGCCTTCGATTGGGCTGGAAAATGCGAGGTAGGGAA
GGAGGGAGAATGGAGGGTCGAAGGGAGGGAGGAGGGAAGTGGGAAGGGGG
GAGGGAGGAAAGACATATGTTATCTTTACACATAATTGCTTTACTGAGTC
ATTTTTCCTCGCTCCCGCTCCCCCCTTTTTAATCCCTCTACCCCTCCTTT
CTCCTTTAATCCCTTTTTCTCATCGTCGGTAGTGGTCATGCTGGTGATGG
GTGCGCTCATTATCTGGTGGGTAGCTTTCAAGAAGGAGGAATAG
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Coding sequence (CDS) from alignment at chr6:1168207..1169900-

>NO06G04190.1 ID=NO06G04190.1|Name=NO06G04190.1|organism=Nannochloropsis oceanica|type=CDS|length=1224bp|location=Sequence derived from alignment at chr6:1168207..1169900- (Nannochloropsis oceanica)
ATGTACGGCATCTCCAATCTTCAGGATTTGGTGGGCTTGGTCAAGGAGAA
GGGGAGTGAGTTGGCAGCTGAAGGGAAACTCTTCGCAGACCGCCTCTCCC
TGGACCGACTCCAGGAGGAAGGTGGGGGACAAGCAGCTAGAGCAGGCGGA
GGGAAAAGCAGCGGCACATCGGCAGTCTCTCAAGAGCAGAACTTTCTCCC
TCCACGACCGGACATCTACTCCGCGGCCGCCGTAGCACGAGCCCGTGAAA
TGAACGTGATTGCCGCTGCTCCCTCCCGCCCTTCCCCCCTTCCTTCCTCT
CTTCCTCCAGCCCGCCCTGCACCCCTCCCTCCTCCTTCCATCGCGGCGGA
GGAGGGGAAGCGAGGGAACGGGAACGCGGGAGGGAGGTCGGGGAGGAGGG
AGGAGGAGGATAATGAGGACGAAAACGATCCCATCATGGCGGCTATTCGA
GGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAGGAGGAGGAGGA
GGAGGTGGACGTCGAGGCGGCAGTGGCCGAATCCCTGGCGTTCCTGAACA
AGAAGCAGCCGGCAGCAGGGGCAGGAGTATCACGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAAGAGGAGGAGGAGAAGAAGAAGGAGGGAAATGGGAGGG
AGGAAAGGGTGGGGTGGGTGAGTGGGCGGGGAGGGTGAGGAGTGAGTTCT
GGGGCACCGTGGGCAAGGCGATGGGACAGCCATGGGGAGGAGGAGGGGGA
GGAGGAGGGGGAGGGGGAGGAGGAGGAGGAGGGGGAGGGAAAGGGAATGA
GGGAGGAGGGAAGTGGGGGCATGTGAATGATGGTGGCGGTGGAGGAGGGA
GAGGAGCAGCAGCAGCAGGGGAGGTGGAAGTAGTCAGGATACAGGGACGT
GAGGTTCTCACAGAGGAAGAGCGTCGACACCTTGCCGCCCTCCAAGGAGG
GCACCACGGCGGCTTCTTTACTTCCCTCTTCGGTTTCACAGGGGCAGGAG
GAGGAGGAGGTGGAGGAGGAGGGAGCTCGGCGGCTTTTTTCGTTCTTCCC
ACCTCGTCCTCGTCCTCGACCTCGGGTAGGCAAGTGATGCGGCCGGTGCC
GATGCGAGGGACTGTGGGAGCTGGAGCAGGGAGTCGCCTTCGATTGGGCT
GGAAAATGCGAGTGGTCATGCTGGTGATGGGTGCGCTCATTATCTGGTGG
GTAGCTTTCAAGAAGGAGGAATAG
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Synonyms
Publications