NO06G00370, NO06G00370 (gene) Nannochloropsis oceanica

Overview
NameNO06G00370
Unique NameNO06G00370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1724
Alignment locationchr6:156914..158637 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:156914..158637 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO06G00370 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 117.9 bits (294), Expect = 3.900e-23
Identity = 77/193 (39.90%), Postives = 111/193 (57.51%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEFENTLSSPLIAAFGID---GVGEIFDVNYKCTE--KVGTRATKFLCTPG 189
            MRR LSL+ALGVTL +TA Q      L ++K  + ++  +DQWS+KG  ++P  N VPAI   GL+  LL+ + D ++ T F A +C+LL N +GV CK  GAR S+KRT+R PK A +   ++ N+ +   YY  SG+ RR +F   L  P++    +    G   +  +   C+E  K   R TK  CTPG
Sbjct:    1 MRRILSLLALGVTLVMTAGQ---EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQF---LQDPVVTPLTVQVVVGSTTLPAIVSTCSERTKGAGRITKITCTPG 183          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana])

HSP 1 Score: 117.5 bits (293), Expect = 5.000e-23
Identity = 78/189 (41.27%), Postives = 104/189 (55.03%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEF-ENTLSSPLIAAFGIDGVGEIFDVNYKCTEKVGTRATKFLCTPG 189
            MRR LSL+ALG+TLALT  Q    L L SIK  + T+ NKD+WS+K +  DP    V  I  +GL+  LL+  +DT+    F A DC +  N KG  CK+ GAR S+ R  + PK     V ++ N+T    YY VSG  RR +  E+ +  PL A   + GVG +      C+ K GT+  K  C PG
Sbjct:   80 MRRGLSLLALGLTLALTTGQ---MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 257          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana])

HSP 1 Score: 117.5 bits (293), Expect = 5.000e-23
Identity = 78/189 (41.27%), Postives = 104/189 (55.03%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEF-ENTLSSPLIAAFGIDGVGEIFDVNYKCTEKVGTRATKFLCTPG 189
            MRR LSL+ALG+TLALT  Q    L L SIK  + T+ NKD+WS+K +  DP    V  I  +GL+  LL+  +DT+    F A DC +  N KG  CK+ GAR S+ R  + PK     V ++ N+T    YY VSG  RR +  E+ +  PL A   + GVG +      C+ K GT+  K  C PG
Sbjct:   11 MRRGLSLLALGLTLALTTGQ---MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 188          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana])

HSP 1 Score: 115.2 bits (287), Expect = 2.500e-22
Identity = 75/189 (39.68%), Postives = 101/189 (53.44%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEF-ENTLSSPLIAAFGIDGVGEIFDVNYKCTEKVGTRATKFLCTPG 189
            MRR LSL+ALG+TLALT  Q    L L SIK  + TR NKD+WS+KG   DP    V  I  +GL+  LL+  +DT+   +F A DC +  N KG  CK+ GAR S+ R  + PK   +     +   +   YY VSG  R  +  E+ + SPL A   + GVG +      C+ + G   T+  C PG
Sbjct:   68 MRRGLSLLALGLTLALTTGQ---MLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSI-RASKPPKGVKV-----KTYNSTGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTCVPG 246          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 114.8 bits (286), Expect = 3.300e-22
Identity = 77/189 (40.74%), Postives = 104/189 (55.03%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEF-ENTLSSPLIAAFGIDGVGEIFDVNYKCTEKVGTRATKFLCTPG 189
            MRR LSL+ALG+TLALT  Q    L L SIK  + T+ NKD+WS+KG+  DP    V  I   GL+  LL+   DT+   +F A DC +  + KG  CK+ GAR S+ R  + PK     V ++ N+T    Y+ VSG  RR +  E+ +  PL A   + GVG +      C+ K GT+  K  C PG
Sbjct:    1 MRRGLSLLALGLTLALTTGQ---MLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 178          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana])

HSP 1 Score: 112.5 bits (280), Expect = 1.600e-21
Identity = 72/192 (37.50%), Postives = 106/192 (55.21%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEF-ENTLSSPLIAAFGIDGVG-EIFDVNYKCTEKV--GTRATKFLCTPG 189
            MRRA  L+ALG+TL +TA Q + T  L ++K +D ++  +DQWS+KG  +DP    VP I   GL+  L +    T+  T F A DC+L  N +GV CK  GAR S+K ++R PK A ++   N N  +   YY  SG+ RR +F ++ +  PL     +  +      +   C+EK+    R T+  CTPG
Sbjct:   20 MRRAFFLLALGITLVMTAGQDLFT--LKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG 205          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 112.1 bits (279), Expect = 2.100e-21
Identity = 72/192 (37.50%), Postives = 106/192 (55.21%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEF-ENTLSSPLIAAFGIDGVG-EIFDVNYKCTEKV--GTRATKFLCTPG 189
            MRRA  L+ALG+TL +TA Q + T  L ++K +D ++  +DQWS+KG  +DP    VP I   GL+  L +    T+  T F A DC+L  N +GV CK  GAR S+K ++R PK A ++   N N  +   YY  SG+ RR +F ++ +  PL     +  +      +   C+EK+    R T+  CTPG
Sbjct:    1 MRRAFFLLALGITLVMTAGQDLFT--LKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG 186          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana])

HSP 1 Score: 108.6 bits (270), Expect = 2.300e-20
Identity = 66/154 (42.86%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEFENTLSSPLI 155
            MRR LSL+ALGVTL +TA Q      L ++K  + ++  +DQWS+KG  ++P  N VPAI   GL+  LL+ + D ++ T F A +C+LL N +GV CK  GAR S+KRT+R PK A +   ++ N+ +   YY  SG+ RR +F   L  P++
Sbjct:   37 MRRILSLLALGVTLVMTAGQ---EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQF---LQDPVV 180          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana])

HSP 1 Score: 106.7 bits (265), Expect = 8.900e-20
Identity = 73/192 (38.02%), Postives = 102/192 (53.12%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTV-PTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEF-ENTLSSPLIAAFGIDGVGEIFDVNYKCTE--KVGTRATKFLCTPG 189
            MR  LSL+ALG+TL  T   T    L L SI+A+D +  NKD W +KG  NDP    VPAI  TGL+  L +   D ++   F A DCR+  + +   CK+ GAR S+KR++R PK    +    ++  +   YY V+G  R   F EN + SPL AA  ++G   + D    C +  +   R+T   C PG
Sbjct:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRR-PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNG-SVLSDTLISCYDLARKSARSTISQCEPG 190          
BLAST of NO06G00370 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 105.1 bits (261), Expect = 2.600e-19
Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFNDPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKVTGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEF-ENTLSSPLIAAFGIDGVGEIFDVNYKCTE--KVGTRATKFLCTP 188
            MR  LSL+ALG+TL +TA Q      L +IK     +  +DQWS+KG  ++P  N VP I  +GL+  LL+ +   ++   F A +C+LL N +GV CK  GAR  +KRT+R PK A +   ++ +  +   YY  SG+ RR +F ++T+ +PL     + G   +  +   C+E  K   R TK  CTP
Sbjct:    1 MRCILSLLALGITLVMTAGQ---EFTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKV---KSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQL-VVGTTTLPAIVSTCSERTKSAGRITKITCTP 182          
The following BLAST results are available for this feature:
BLAST of NO06G00370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 17
Match NameE-valueIdentityDescription
EWM30045.13.900e-2339.90hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
EWM22002.15.000e-2341.27hypothetical protein Naga_100353g5 [Nannochloropsi... [more]
EWM22004.15.000e-2341.27hypothetical protein Naga_100353g6 [Nannochloropsi... [more]
EWM22005.12.500e-2239.68hypothetical protein Naga_100353g3 [Nannochloropsi... [more]
XP_005852576.13.300e-2240.74hypothetical protein NGA_0721300 [Nannochloropsis ... [more]
EWM30036.11.600e-2137.50hypothetical protein Naga_100179g1 [Nannochloropsi... [more]
XP_005855033.12.100e-2137.50hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
EWM20105.12.300e-2042.86hypothetical protein Naga_101776g1 [Nannochloropsi... [more]
EWM20521.18.900e-2038.02hypothetical protein Naga_100335g8, partial [Nanno... [more]
EWM20135.12.600e-1937.37hypothetical protein Naga_101626g1, partial [Nanno... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00370.1NO06G00370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00370.1NO06G00370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00370 ID=NO06G00370|Name=NO06G00370|organism=Nannochloropsis oceanica|type=gene|length=1724bp
AAACAAACCACACACACACAAGAAAAACCAAAAATACCAAAAAACAGACA
AGTACCCACTCCTCTTTCTCCATTGCGTTTGAAAACTTGCTCTCTTACTC
TTCCTCTGGTGTGCTTTTCCGCTAGTGTATTGTGCTTTTCAAAGTTTGTG
GTCGGCCTCTTCGGGGCAATGGCTTCTTACCGTTGAATCTAACGCCTTGC
AGGACGCGACCTAAGGTAGGGCCTTCGAGCTCAAGTACGGGGCGACCCCT
ACTCTTATCCTCCCTCTTCTAGCATTACCCCTGACATGGTCAAAGAATTG
CAATCAACGCCGAGAGTATGGTTGTTTGTGTTATCTCTTCCACGGGTGTG
GGGCGGTGCGAGGCGACATTGTGACGGCCGCGCGCACCCGTCCCAGGGAG
GCCACTCTGTTACGGATCAATGTTTACCCCGCCCCTTTCTCTTTGATAAC
TACTCGGGGCCCCTCTTGGTCTTGTGCCGATTTTGTGCTAAGCACAATCC
GTGCAGTGTTGACGACGTAACTTCGTCAATACTGCACGCTTTCTCAACCG
ACAACCACACTCAGTCAAAGCACTCAGCACTCTTCGATCAATTTATAATA
TACGTCTCACGCAGTTACAGCAAAAAAGCCTTCCCTCGCGATATAACATG
CGTCGTGCTCTTTCTCTGGTTGCCCTTGGCGTCACCCTCGCCCTCACGGC
GGCTCAGACTGTGCCGACGTTGATTCTTACCTCCATCAAGGCACTTGACA
CGACCAGGGCAAACAAGGACCAATGGAGTGTCAAGGGCTACTTCAACGAT
CCTGATGGGAATGCTGTCCCGGCTATTGATGACACTGGCTTGTCCGCGCT
GCTTTTAAACGGGAACGAAGACACAGTGAGTGAAACGAACTTTGACGCGG
ATGATTGCAGACTGCTCAACAACGATAAGGGAGTCATTTGCAAGGTAACG
GGCGCCCGCTTCTCGCTCAAGAGGACTAAGAGAGTACCCAAGGACGCCAT
GCTGGAGGTGCAGAGGAACCGCAACACGACCACCGCCTCTTCCTACTACA
GGGTTTCGGGTGTTCTCCGCCGTCAGGAGTTCGAAAACACTCTTTCGTCG
CCTCTGATTGCTGCCTTCGGCATTGATGGCGTAGGCGAGATCTTTGATGT
CAATTATAAGTGCACTGAGAAAGTAGGAACCAGGGCCACCAAGTTCCTCT
GCACGCCTGGCACCGCCCCGCCTACTACTGCCCCTACTGCTACCCCTACT
CCTGCCCCTTCTGTTACCTAAAGGCGGTCGCATGGTAATTGGGTATCTAC
TGTCTAAAGGCAGTCGTGTGGTAGATGAGCATCCGCTTGGCGTCCTAATC
TGGCAAGGGACGCTATAAGTCCTGTTGTCTCTTGTGTATTCACGTCGATC
TGTCCATGTGCGCGACCATATATCTGTCTGTTTTGTCGTGTCTATGTGTT
GTATATGCGCTGTGTTTTGTATGTGTGGATTCCCTTGCTTGAGCGCCACT
TGTGTCGTGGGCTTTTGGTTTCTTGACCGTCTTGCAGAGGCCAGTTACGG
ACTTGTGTGTGTGTTGTGTTGTGTATGCGTACCTTCTGTGAGCTTCTAGT
GCAAGGTTCTATGTAGGAAGATCGATTGCGGAGTTCCCCTGTGAAACCTC
AGCTTCTTATGTACCAGCCTTTACAAATAAAGAAAATGCTTCGCGCAGGC
GATTATTTGTGATAAAACATGGTA
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protein sequence of NO06G00370.1

>NO06G00370.1-protein ID=NO06G00370.1-protein|Name=NO06G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=208bp
MRRALSLVALGVTLALTAAQTVPTLILTSIKALDTTRANKDQWSVKGYFN
DPDGNAVPAIDDTGLSALLLNGNEDTVSETNFDADDCRLLNNDKGVICKV
TGARFSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVLRRQEFENTLS
SPLIAAFGIDGVGEIFDVNYKCTEKVGTRATKFLCTPGTAPPTTAPTATP
TPAPSVT*
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Synonyms
Publications