NO05G01670, NO05G01670 (gene) Nannochloropsis oceanica

Overview
NameNO05G01670
Unique NameNO05G01670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2729
Alignment locationchr5:456703..459431 -

Link to JBrowse

Properties
Property NameValue
DescriptionKatanin p60 ATPase-containing subunit A1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:456703..459431 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR015415Vps4_C
IPR003593AAA+_ATPase
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: EWM28171.1 (katanin p60 atpase-containing subunit a 1 [Nannochloropsis gaditana])

HSP 1 Score: 625.2 bits (1611), Expect = 2.400e-175
Identity = 421/687 (61.28%), Postives = 454/687 (66.08%), Query Frame = 0 
Query:    1 MADTLSQNPSAVNNSTEISTSSAN----TTKPSSISLSMPSKVKKLPLLLRQAREHGLLSQYDTAIQLHRKAQQVLHDFIKDDLASEEQGDRRVKYLRLAKEIKAEENLVKELHSTLSSIPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGSRIRAPVKPVLPTNPSSALSQNARRNQGRCGGGNPPSLDTSGPYAALHKSXXXXXXXXXXXXXEGVESDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV 684
            MAD  +++    +N+ + ST++A     T K ++   S+PS VKKLPLLLRQAREHGLLSQY+ AIQLHRKAQQVL +F    L S++Q  RR +YL+LAKE+KAEE LV EL +TL SIP                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                               XXXXXXXXXXXX                                  G N  ++DT+GPYA L K                   D  PLA NGKPRYSDVAR  GWADTELIESIEREIVEQGVNVSW+SIADL EAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVAD                               TN PWDLDDALRRRMEKRIYISLPTEEGRKELFRINM+DIE+GDDLDLD LA+QTEGYSGADIANVCRDASMMSVRRV+EEARKQGLHGLEIQKALMANR+KL +S VTQADFLFALSK+SKSVG+GDL +Y +WMQEFGSV
Sbjct:    1 MADAANKSSLPGSNTLQSSTNTAENASATIKAAATLPSIPSAVKKLPLLLRQAREHGLLSQYEAAIQLHRKAQQVLQEFANVTLKSDDQEWRRNRYLKLAKELKAEEALVNELQNTLRSIP-------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPDSEIAREPGVWEAPTPPTTSRRSKASVGGREGGMRTHRQSLGVGGKETAEGRRVAAASTRKLGSNRRTSQAGARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNATAVDTAGPYATLQK-------HNSSNSANSRAEDTPPLALNGKPRYSDVAREAGWADTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: CBN73777.1 (putative; katanin like protein [Ectocarpus siliculosus])

HSP 1 Score: 457.2 bits (1175), Expect = 8.800e-125
Identity = 269/371 (72.51%), Postives = 304/371 (81.94%), Query Frame = 0 
Query:  332 SDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVA--------------------DQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGS 683
            S P       +PRYSD+AR EGWAD ELIES+ER+IVE+GV+V+W+ IADL +AKQLLQEAVVLPLWMPDYFKGIRRPWKGVL+FGPPGTGKTMLAKAVA EC TTFFNVSASTLGSKYRG+SEKMVR+LFEMARYYAPST+FFDEIDS+AGSRG  GEHEASRRVKTELMVQMDGV                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NTPW LD+ALRRR+EKRIYI LPTE GRKELFRIN+ D+E+ DD+DLD LA  T+GYSGAD+A VCRDA+MMSVRRV++ A ++GL G EIQK +M  +++L ++ VT  DF  +L KVSKSVG  DL KY EWM+EFGS
Sbjct:  408 SPPAVTGPAQQPRYSDLAREEGWADRELIESLERDIVERGVSVTWDQIADLKDAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGSRGSDGEHEASRRVKTELMVQMDGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPWSLDEALRRRLEKRIYIPLPTEVGRKELFRINLGDVEVDDDVDLDALAGLTDGYSGADVAIVCRDAAMMSVRRVMKGALERGLSGPEIQKHVMEMKDEL-AAAVTMEDFRSSLRKVSKSVGQADLDKYDEWMKEFGS 777
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: XP_009034504.1 (hypothetical protein AURANDRAFT_21746, partial [Aureococcus anophagefferens] >EGB10935.1 hypothetical protein AURANDRAFT_21746, partial [Aureococcus anophagefferens])

HSP 1 Score: 420.6 bits (1080), Expect = 9.200e-114
Identity = 213/327 (65.14%), Postives = 254/327 (77.68%), Query Frame = 0 
Query:  356 DTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGS 683
            D ELIE IER+IVE GV+V+W+ IA+L EAKQLLQEAVVLPLWMPD+F+GIRRPWKGVL+FGPPGTGKTMLAKAVA EC TTFFNVSASTL SK+RG+SEKMVR+LF+MAR++APST+FFDEIDS+AG RGG+ EHEASRRVKTELMVQMDGVA                                TNTPW+LD+ALRRR+EKRIYI LPT  GR  LF INMK +++ DD++LD LA +T+GYSGAD+ANVCRDA+MMSVRRV+E AR +GL G E+Q+ L ANR  + +  V+  DFL A+ KV  SVG+ DL KY++W  EFG+
Sbjct:    1 DVELIEGIERDIVETGVSVTWDEIAELKEAKQLLQEAVVLPLWMPDFFRGIRRPWKGVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLSSKWRGESEKMVRLLFDMARWHAPSTVFFDEIDSLAGQRGGANEHEASRRVKTELMVQMDGVA--------GGSGDAPEDAGAEAAPRTVIVLAATNTPWELDEALRRRLEKRIYIPLPTAAGRAALFEINMKSVDVADDVELDDLAAKTDGYSGADVANVCRDAAMMSVRRVMEAARAKGLSGAEMQRELAANRGAMQAD-VSMEDFLNAIRKVRGSVGSADLQKYRDWSDEFGA 318
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: XP_007547188.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia formosa] >XP_014912107.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia latipinna] >XP_014912115.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia latipinna] >XP_014912123.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia latipinna] >XP_014912133.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia latipinna] >XP_016524576.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia formosa] >XP_016524577.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia formosa] >XP_016524578.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia formosa])

HSP 1 Score: 385.2 bits (988), Expect = 4.300e-103
Identity = 218/417 (52.28%), Postives = 276/417 (66.19%), Query Frame = 0 
Query:  273 PVLPTNPSSALSQNARRNQG---RCGGGNP---PSLDTSGPYAALHKSXXXXXXXXXXXXXEGVESDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV 684
            PV+   P+SA+ Q+ + + G   R  GG     P  +     AA  K              +G + DPL   A G+ +  D   G G+ D++L++S+ER+IV +  NV W+ IADL +AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL++QMDGV                                 TN PWD+D+ALRRR+EKRIYI LPT  GR EL +IN++++EL  D++LD++A++ EGYSGADI NVCRDASMM++RR     R QGL   EI +AL  +  ++    VT  DF   L K+SKSV   DL KY+ WM EFGSV
Sbjct:  108 PVVVKRPNSAIKQHRKESPGVQHRGAGGRAQTNPKAERQANRAAKAKD-----------DKQGKKVDPL---AEGEQKKFD---GTGY-DSDLVDSLERDIVSRNPNVHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGVG---------------GALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVELAPDVNLDLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RALSKDELQM---PVTMEDFTTTLKKISKSVSAADLEKYESWMAEFGSV 482
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: XP_007547190.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X2 [Poecilia formosa] >XP_014912143.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X2 [Poecilia latipinna])

HSP 1 Score: 384.8 bits (987), Expect = 5.600e-103
Identity = 218/417 (52.28%), Postives = 276/417 (66.19%), Query Frame = 0 
Query:  273 PVLPTNPSSALSQNARRNQG---RCGGGNP---PSLDTSGPYAALHKSXXXXXXXXXXXXXEGVESDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV 684
            PV+   P+SA+ Q+ + + G   R  GG     P  +     AA  K              +G + DPL   A G+ +  D   G G+ D++L++S+ER+IV +  NV W+ IADL +AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL++QMDGV                                 TN PWD+D+ALRRR+EKRIYI LPT  GR EL +IN++++EL  D++LD++A++ EGYSGADI NVCRDASMM++RR     R QGL   EI +AL  +  ++    VT  DF   L K+SKSV   DL KY+ WM EFGSV
Sbjct:  108 PVVVKRPNSAIKQHRKESPGVQHRGAGGRAQTNPKAERQANRAAKAKD------------DKGKKVDPL---AEGEQKKFD---GTGY-DSDLVDSLERDIVSRNPNVHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGVG---------------GALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVELAPDVNLDLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RALSKDELQM---PVTMEDFTTTLKKISKSVSAADLEKYESWMAEFGSV 481
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: XP_014858830.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia mexicana] >XP_014858838.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia mexicana] >XP_014858847.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia mexicana] >XP_014858855.1 PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Poecilia mexicana])

HSP 1 Score: 384.8 bits (987), Expect = 5.600e-103
Identity = 218/417 (52.28%), Postives = 276/417 (66.19%), Query Frame = 0 
Query:  273 PVLPTNPSSALSQNARRNQG---RCGGGNP---PSLDTSGPYAALHKSXXXXXXXXXXXXXEGVESDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV 684
            PV+   P+SA+ Q+ + + G   R  GG     P  +     AA  K              +G + DPL   A G+ +  D   G G+ D++L++S+ER+IV +  NV W+ IADL +AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL++QMDGV                                 TN PWD+D+ALRRR+EKRIYI LPT  GR EL +IN++++EL  D++LD++A++ EGYSGADI NVCRDASMM++RR     R QGL   EI +AL  +  ++    VT  DF   L K+SKSV   DL KY+ WM EFGSV
Sbjct:  108 PVVVKRPNSAIKQHRKESPGVQHRGAGGRAQANPRAERQANRAAKAKD-----------DKQGKKVDPL---AEGEQKKFD---GTGY-DSDLVDSLERDIVSRNPNVHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGVG---------------GALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVELAPDVNLDLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RALSKDELQM---PVTMEDFTTTLKKISKSVSAADLEKYESWMAEFGSV 482
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: XP_017265616.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X1 [Kryptolebias marmoratus])

HSP 1 Score: 384.8 bits (987), Expect = 5.600e-103
Identity = 197/328 (60.06%), Postives = 242/328 (73.78%), Query Frame = 0 
Query:  356 DTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV 684
            D++L++S+ER+IV +  NV WE IADL +AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL++QMDGV                                 TN PWD+D+ALRRR+EKRIYI LPT EGR EL +IN++++EL  D+DLD++A++ EGYSGADI N+CRDASMM++RR     R QGL   EI +AL  +  ++    VT  DF   L K+SKSV   DL KY+ WM EFGSV
Sbjct:  192 DSDLVDSLERDIVSRNPNVHWEDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLSSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGVG---------------GAMENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAEGRAELLKINLREVELAPDVDLDLIAEKIEGYSGADITNICRDASMMAMRR-----RIQGLSPEEI-RALSKDELQM---PVTMEDFTLTLKKISKSVSAADLEKYEAWMAEFGSV 495
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: XP_014858863.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X2 [Poecilia mexicana])

HSP 1 Score: 384.4 bits (986), Expect = 7.300e-103
Identity = 218/417 (52.28%), Postives = 276/417 (66.19%), Query Frame = 0 
Query:  273 PVLPTNPSSALSQNARRNQG---RCGGGNP---PSLDTSGPYAALHKSXXXXXXXXXXXXXEGVESDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV 684
            PV+   P+SA+ Q+ + + G   R  GG     P  +     AA  K              +G + DPL   A G+ +  D   G G+ D++L++S+ER+IV +  NV W+ IADL +AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL++QMDGV                                 TN PWD+D+ALRRR+EKRIYI LPT  GR EL +IN++++EL  D++LD++A++ EGYSGADI NVCRDASMM++RR     R QGL   EI +AL  +  ++    VT  DF   L K+SKSV   DL KY+ WM EFGSV
Sbjct:  108 PVVVKRPNSAIKQHRKESPGVQHRGAGGRAQANPRAERQANRAAKAKD------------DKGKKVDPL---AEGEQKKFD---GTGY-DSDLVDSLERDIVSRNPNVHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGVG---------------GALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVELAPDVNLDLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RALSKDELQM---PVTMEDFTTTLKKISKSVSAADLEKYESWMAEFGSV 481
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: XP_017159237.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X2 [Poecilia reticulata])

HSP 1 Score: 384.4 bits (986), Expect = 7.300e-103
Identity = 215/411 (52.31%), Postives = 272/411 (66.18%), Query Frame = 0 
Query:  273 PVLPTNPSSALSQNARRNQGRCGGGNPPSLDTSGPYAALHKSXXXXXXXXXXXXXEGVESDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV 684
            PV+   P+SA+ Q+ + + G    G        G   A  K+             +G + DPL   A G+ +  D   G G+ D++L++S+ER+IV +  NV W+ IADL +AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL++QMDGV                                 TN PWD+D+ALRRR+EKRIYI LPT  GR EL +IN++++EL  D++LD +A++ EGYSGADI NVCRDASMM++RR     R QGL   EI +AL  +  ++    VT  DF   L K+SKSV   DL KY+ WM EFGSV
Sbjct:  108 PVVVKRPNSAIKQHRKESPGMQHRG------AGGRVHANPKAERQANRATKAKDDKGKKVDPL---AEGEQKKFD---GTGY-DSDLVDSLERDIVSRNPNVHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGVG---------------GALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVELAPDVNLDXIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RALSKDELQM---PVTMEDFTTTLKKISKSVSAADLEKYESWMAEFGSV 481
[Close]
BLAST of NO05G01670 vs. NCBI_GenBank
Match: XP_019956289.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 [Paralichthys olivaceus])

HSP 1 Score: 383.6 bits (984), Expect = 1.200e-102
Identity = 200/333 (60.06%), Postives = 245/333 (73.57%), Query Frame = 0 
Query:  351 GEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV 684
            G G+ D++L++S+ER+IV +  NV WE IADL +AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL+VQMDGV                                 TN PWD+D+ALRRR+EKRIYI LPT  GR EL +IN++++E+ DD+DLD++A++ EGYSGADI NVCRDASMM++RR     R QGL   EI +AL  +  ++    VT  DF   L K+SKSV   DL KY+ WM EFGSV
Sbjct:  192 GTGY-DSDLVDSLERDIVSRNPNVHWEDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGVG---------------GALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVEVADDVDLDLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RALSKDELQM---PVTMEDFTLTLKKISKSVSAADLEKYEAWMAEFGSV 499
The following BLAST results are available for this feature:
BLAST of NO05G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28171.12.400e-17561.28katanin p60 atpase-containing subunit a 1 [Nannoch... [more]
CBN73777.18.800e-12572.51putative; katanin like protein [Ectocarpus silicul... [more]
XP_009034504.19.200e-11465.14hypothetical protein AURANDRAFT_21746, partial [Au... [more]
XP_007547188.14.300e-10352.28PREDICTED: katanin p60 ATPase-containing subunit A... [more]
XP_007547190.15.600e-10352.28PREDICTED: katanin p60 ATPase-containing subunit A... [more]
XP_014858830.15.600e-10352.28PREDICTED: katanin p60 ATPase-containing subunit A... [more]
XP_017265616.15.600e-10360.06PREDICTED: katanin p60 ATPase-containing subunit A... [more]
XP_014858863.17.300e-10352.28PREDICTED: katanin p60 ATPase-containing subunit A... [more]
XP_017159237.17.300e-10352.31PREDICTED: katanin p60 ATPase-containing subunit A... [more]
XP_019956289.11.200e-10260.06PREDICTED: katanin p60 ATPase-containing subunit A... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003702NSK003702Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01670.1NO05G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526697gene_2955Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g91gene2348Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01670.1NO05G01670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01670 ID=NO05G01670|Name=NO05G01670|organism=Nannochloropsis oceanica|type=gene|length=2729bp
ATGGCGGACACCCTCTCCCAAAACCCGAGCGCCGTCAACAACAGCACCGA
AATCAGCACCAGCAGTGCCAACACCACCAAACCCAGCAGCATCTCCTTGT
CCATGCCTTCGAAAGTGAAAAAGTTGCCCCTGCTCCTTCGCCAAGCTCGG
GAGCACGGCCTGCTTAGCCAGTACGACACGGCCATCCAGCTCCATCGCAA
GGCCCAACAAGTCCTCCACGACTTCATCAAGGATGACCTGGCCTCAGAAG
AACAAGGAGACCGACGTGTCAAGTATTTGCGGTTGGCTAAGGAAATCAAA
GCGGAAGAAAACCTTGTCAAGGAACTTCACAGCACCCTCTCCTCCATCCC
CTCGACTCCACCAAGCAACAAGCCAAAACCTCTACTTCCTCCTCCCCCAC
TCTCCGCCGCCGCCCAAGCTGCGGCCGCTGATAAGAAAAGACTTGCCGCG
GCAGCAGCAGCAGCAGCAGCAGCAGCAGAACCGGCAGAAGCGGACACAAA
ATCCGGACGTGATCCCGACGTGTGGGAAGCGCCACCACCGCCGGCTGGTG
GTTCGCGAGGCAACGCTCGTGCGTTCATGGGTGGGAGTGGTGGGTCAGGG
GTCCGAACACGTCGGCAATCTATCAGCGGTGCAAATGCAGCAGGAGGAGG
CGGAAGTAAAGGAGGGGGAAGGCGTGCTATGTCCACATCGGTCAACAGCA
ACCACCGGCGGACATCAGTAGGCTCCCGTACCATCACAACCACCACCACT
ACTTCCTCCTCTTCCTCCTCTTCCTCAGCCAGAGCCGATGGCAGCCGTAT
CCGTGCCCCGGTAAAACCTGTCTTGCCCACCAACCCCTCCTCCGCTTTAT
CCCAAAACGCCCGACGAAACCAAGGCCGCTGTGGTGGTGGAAACCCTCCC
TCCCTTGATACCTCTGGGCCGTACGCCGCTCTACACAAAAGCAACAGTAG
CAACAGTAGCAACGGCAGCGGTGGGGTTGGAGAAGGAGTAGAGAGCGACC
CTCTCCCTTTGGCCGCGAACGGCAAGCCGCGTTACAGCGACGTGGCGCGC
GGGGAGGGCTGGGCTGACACGGAGCTGATCGAGAGCATTGAAAGGGAGAT
TGTGGAGCAGGGGGTCAATGTATCATGGGAGTCCATAGCTGATTTGACGG
AGGCGAAGCAGCTGCTGCAGGAGGCGGTGGTGCTGCCTTTGTGGATGCCG
GACTACTTCAAGGGGATCCGACGACCCTGGAAGGGGGTATTATTGTTTGG
gtacgatgggagggaccgagggaggatatatatacatagagagagagagc
gattgaaagaaagaggagggagaggagggagaaggggagggcgtatgata
ggaataaagggacgggttgggatgtggagactgcagacgaaatgacccgg
gtccccttgtttctgtcgatctctctcctccacacacagACCACCAGGCA
CGGGCAAGACGATGCTGGCCAAGGCCGTGGCCACGGAGTGCGCCACCACC
TTCTTTAATGTCTCTGCATCCACGCTCGGCTCCAAGgtacggctcctggc
ttggtttagcaactatcgccaatctccaccccacgagattcgtgtaaatc
ttgtttccaacttgggcacgactaccgtctactgacaccttgcctttcct
ccctcctcaccccaaacagTACCGCGGCGACAGCGAGAAGATGGTTCGGA
TTCTATTTGAAATGGCCCGATACTACGCCCCCTCAACCTTGTTCTTCGAC
GAGATCGACTCCATTGCTGGCTCGCGGGGAGGGAGCGGCGAGCATGAGGC
AAGCCGTCGGGTGAAGACTGAGTTGATGGTTCAGATGGACGGCGTTGCGG
ATCAGAGCTCGCAGAAAGGAGGGGGGGAGGAAGAGGGGGGGGAAGGGGGG
GAAGAGGAACGACCGGGGAGTAAGACTGTGATTGTGTTGGCGGCTACGAA
TACACCGTGGGATTTGGACGATGCGTTGAGGCGGAGGATGGAGAAACGGA
TCTACATTTCCCTGCCGACGGAGGAGGGGAGGAAGGAGTTGTTCAGGATT
AATATGAAGGATATTGAGTTGGGCGATGACCTTGATTTGGATATTTTGGC
GAAGCAGACAGAGGGATACTCAGGGGCGGACATCGCGAACGTGTGTAGGG
ATGCAAGTATGATGAGCGTGAGAAGGGTGGTGGAGGAGGCGCGGAAGCAG
GGCTTGCATGGCTTGGAGATCCAGAAGGCGCTGATGGCTAATCGGGAGAA
GTTACATTCCTCAACGGTAACCCAAGCGGACTTCTTGTTTGCCTTGTCCA
AGGTGAGCAAGAGTGTGGGGACGGGGGATCTAAGTAAGTACCAGGAGTGG
ATGCAGGAGTTCGGCAGTGTGTAGAGAAGAGTTACGAAGTAAGGGTAGGA
GGGTAACATGAGATCGATGGTACAGGAGCGGATGGGGAGCGGGATGTCAG
TTGCAGGAACAGACGCGAAGAGATAGAGCTGGGGAGATAAGCCTTGAGGT
ATAAGCGTGTGTCTGTGTTCAATGATGGACGGGTGCGTGCACGTGAGTGT
CGGGGGGGGAAGGGGCGTGAGGGCATGCGTGTGTAAAGGAAACAAGGAAC
AGTACAAGAGAAAGAATAAATATATTCCCATACACTCTTACTCCCTCATC
TGGTTATCGTCTCCCGCCTTCGTCTCCCTCTTCCTTCGCCTCCTCCGCCT
CCTCCTTCGCCTCCTCCTCTTCTTCGCCG
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protein sequence of NO05G01670.1

>NO05G01670.1-protein ID=NO05G01670.1-protein|Name=NO05G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=684bp
MADTLSQNPSAVNNSTEISTSSANTTKPSSISLSMPSKVKKLPLLLRQAR
EHGLLSQYDTAIQLHRKAQQVLHDFIKDDLASEEQGDRRVKYLRLAKEIK
AEENLVKELHSTLSSIPSTPPSNKPKPLLPPPPLSAAAQAAAADKKRLAA
AAAAAAAAAEPAEADTKSGRDPDVWEAPPPPAGGSRGNARAFMGGSGGSG
VRTRRQSISGANAAGGGGSKGGGRRAMSTSVNSNHRRTSVGSRTITTTTT
TSSSSSSSSARADGSRIRAPVKPVLPTNPSSALSQNARRNQGRCGGGNPP
SLDTSGPYAALHKSNSSNSSNGSGGVGEGVESDPLPLAANGKPRYSDVAR
GEGWADTELIESIEREIVEQGVNVSWESIADLTEAKQLLQEAVVLPLWMP
DYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKY
RGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTE
LMVQMDGVADQSSQKGGGEEEGGEGGEEERPGSKTVIVLAATNTPWDLDD
ALRRRMEKRIYISLPTEEGRKELFRINMKDIELGDDLDLDILAKQTEGYS
GADIANVCRDASMMSVRRVVEEARKQGLHGLEIQKALMANREKLHSSTVT
QADFLFALSKVSKSVGTGDLSKYQEWMQEFGSV*
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Synonyms
Publications