jgi.p|Nanoce1779_2|526697, gene_2955 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|526697
Unique Namegene_2955
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:336037..337734 -

Link to JBrowse

Properties
Property NameValue
TranscriptId526783
ProteinId526697
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:336037..337734 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008568microtubule-severing ATPase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01670NO05G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526697mRNA_2955-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526697mRNA_2955Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|526697

>mRNA_2955-protein ID=mRNA_2955-protein|Name=jgi.p|Nanoce1779_2|526697|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MSTSVNSNHRRTSVGSRTITTTTTTSSSSSSSSARADGSRIRAPVKPVLP
TNPSSALSQNARRNQGRCGGGNPPSLDTSGPYAALHKSNSSNSSNGSGGV
GEGVESDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSW
ESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTML
AKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFD
EIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQSSQKGGGEEEGGEGG
EEERPGSKTVIVLAATNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRI
NMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQ
GLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEW
MQEFGSV*
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Synonyms
Publications