Properties
| Property Name | Value |
|---|
| TranscriptId | 526783 |
| Track | FilteredModels2 |
| ProteinId | 526697 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:336037..337734 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2955 ID=mRNA_2955|Name=jgi.p|Nanoce1779_2|526697|organism=Nannochloropsis oceanica|type=mRNA|length=1374bp
ATGTCCACATCGGTCAACAGCAACCACCGGCGGACATCAGTAGGCTCCCG
TACCATCACAACCACCACCACTACTTCCTCCTCTTCCTCCTCTTCCTCAG
CCAGAGCCGATGGCAGCCGTATCCGTGCCCCGGTAAAACCTGTCTTGCCC
ACCAACCCCTCCTCCGCTTTATCCCAAAACGCCCGACGAAACCAAGGCCG
CTGTGGTGGTGGAAACCCTCCCTCCCTTGATACCTCTGGGCCGTACGCCG
CTCTACACAAAAGCAACAGTAGCAACAGTAGCAACGGCAGCGGTGGGGTT
GGAGAAGGAGTAGAGAGCGACCCTCTCCCTTTGGCCGCGAACGGCAAGCC
GCGTTACAGCGACGTGGCGCGCGGGGAGGGCTGGGCTGACACGGAGCTGA
TCGAGAGCATTGAAAGGGAGATTGTGGAGCAGGGGGTCAATGTATCATGG
GAGTCCATAGCTGATTTGACGGAGGCGAAGCAGCTGCTGCAGGAGGCGGT
GGTGCTGCCTTTGTGGATGCCGGACTACTTCAAGGGGATCCGACGACCCT
GGAAGGGGGTATTATTGTTTGGACCACCAGGCACGGGCAAGACGATGCTG
GCCAAGGCCGTGGCCACGGAGTGCGCCACCACCTTCTTTAATGTCTCTGC
ATCCACGCTCGGCTCCAAGTACCGCGGCGACAGCGAGAAGATGGTTCGGA
TTCTATTTGAAATGGCCCGATACTACGCCCCCTCAACCTTGTTCTTCGAC
GAGATCGACTCCATTGCTGGCTCGCGGGGAGGGAGCGGCGAGCATGAGGC
AAGCCGTCGGGTGAAGACTGAGTTGATGGTTCAGATGGACGGCGTTGCGG
ATCAGAGCTCGCAGAAAGGAGGGGGGGAGGAAGAGGGGGGGGAAGGGGGG
GAAGAGGAACGACCGGGGAGTAAGACTGTGATTGTGTTGGCGGCTACGAA
TACACCGTGGGATTTGGACGATGCGTTGAGGCGGAGGATGGAGAAACGGA
TCTACATTTCCCTGCCGACGGAGGAGGGGAGGAAGGAGTTGTTCAGGATT
AATATGAAGGATATTGAGTTGGGCGATGACCTTGATTTGGATATTTTGGC
GAAGCAGACAGAGGGATACTCAGGGGCGGACATCGCGAACGTGTGTAGGG
ATGCAAGTATGATGAGCGTGAGAAGGGTGGTGGAGGAGGCGCGGAAGCAG
GGCTTGCATGGCTTGGAGATCCAGAAGGCGCTGATGGCTAATCGGGAGAA
GTTACATTCCTCAACGGTAACCCAAGCGGACTTCTTGTTTGCCTTGTCCA
AGGTGAGCAAGAGTGTGGGGACGGGGGATCTAAGTAAGTACCAGGAGTGG
ATGCAGGAGTTCGGCAGTGTGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|526697 >mRNA_2955-protein ID=mRNA_2955-protein|Name=jgi.p|Nanoce1779_2|526697|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MSTSVNSNHRRTSVGSRTITTTTTTSSSSSSSSARADGSRIRAPVKPVLP
TNPSSALSQNARRNQGRCGGGNPPSLDTSGPYAALHKSNSSNSSNGSGGV
GEGVESDPLPLAANGKPRYSDVARGEGWADTELIESIEREIVEQGVNVSW
ESIADLTEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTML
AKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFD
EIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADQSSQKGGGEEEGGEGG
EEERPGSKTVIVLAATNTPWDLDDALRRRMEKRIYISLPTEEGRKELFRI
NMKDIELGDDLDLDILAKQTEGYSGADIANVCRDASMMSVRRVVEEARKQ
GLHGLEIQKALMANREKLHSSTVTQADFLFALSKVSKSVGTGDLSKYQEW
MQEFGSV* back to topmRNA from alignment at scaffold_7:336037..337734- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2955 ID=mRNA_2955|Name=jgi.p|Nanoce1779_2|526697|organism=Nannochloropsis oceanica|type=mRNA|length=1698bp|location=Sequence derived from alignment at scaffold_7:336037..337734- (Nannochloropsis oceanica)
ATGTCCACATCGGTCAACAGCAACCACCGGCGGACATCAGTAGGCTCCCG
TACCATCACAACCACCACCACTACTTCCTCCTCTTCCTCCTCTTCCTCAG
CCAGAGCCGATGGCAGCCGTATCCGTGCCCCGGTAAAACCTGTCTTGCCC
ACCAACCCCTCCTCCGCTTTATCCCAAAACGCCCGACGAAACCAAGGCCG
CTGTGGTGGTGGAAACCCTCCCTCCCTTGATACCTCTGGGCCGTACGCCG
CTCTACACAAAAGCAACAGTAGCAACAGTAGCAACGGCAGCGGTGGGGTT
GGAGAAGGAGTAGAGAGCGACCCTCTCCCTTTGGCCGCGAACGGCAAGCC
GCGTTACAGCGACGTGGCGCGCGGGGAGGGCTGGGCTGACACGGAGCTGA
TCGAGAGCATTGAAAGGGAGATTGTGGAGCAGGGGGTCAATGTATCATGG
GAGTCCATAGCTGATTTGACGGAGGCGAAGCAGCTGCTGCAGGAGGCGGT
GGTGCTGCCTTTGTGGATGCCGGACTACTTCAAGGGGATCCGACGACCCT
GGAAGGGGGTATTATTGTTTGGGTACGATGGGAGGGACCGAGGGAGGATA
TATATACATAGAGAGAGAGAGAGCGATTGAAAGAAAGAGGAGGGAGAGGA
GGGAGAAGGGGAGGGCGTATGATAGGAATAAAGGGACGGGTTGGGATGTG
GAGACTGCAGACGAAATGACCCGGGTCCCCTTGTTTCTGTCGATCTCTCT
CCTCCACACACAGACCACCAGGCACGGGCAAGACGATGCTGGCCAAGGCC
GTGGCCACGGAGTGCGCCACCACCTTCTTTAATGTCTCTGCATCCACGCT
CGGCTCCAAGGTACGGCTCCTGGCTTGGTTTAGCAACTATCGCCAATCTC
CACCCCACGAGATTCGTGTAAATCTTGTTTCCAACTTGGGCACGACTACC
GTCTACTGACACCTTGCCTTTCCTCCCTCCTCACCCCAAACAGTACCGCG
GCGACAGCGAGAAGATGGTTCGGATTCTATTTGAAATGGCCCGATACTAC
GCCCCCTCAACCTTGTTCTTCGACGAGATCGACTCCATTGCTGGCTCGCG
GGGAGGGAGCGGCGAGCATGAGGCAAGCCGTCGGGTGAAGACTGAGTTGA
TGGTTCAGATGGACGGCGTTGCGGATCAGAGCTCGCAGAAAGGAGGGGGG
GAGGAAGAGGGGGGGGAAGGGGGGGAAGAGGAACGACCGGGGAGTAAGAC
TGTGATTGTGTTGGCGGCTACGAATACACCGTGGGATTTGGACGATGCGT
TGAGGCGGAGGATGGAGAAACGGATCTACATTTCCCTGCCGACGGAGGAG
GGGAGGAAGGAGTTGTTCAGGATTAATATGAAGGATATTGAGTTGGGCGA
TGACCTTGATTTGGATATTTTGGCGAAGCAGACAGAGGGATACTCAGGGG
CGGACATCGCGAACGTGTGTAGGGATGCAAGTATGATGAGCGTGAGAAGG
GTGGTGGAGGAGGCGCGGAAGCAGGGCTTGCATGGCTTGGAGATCCAGAA
GGCGCTGATGGCTAATCGGGAGAAGTTACATTCCTCAACGGTAACCCAAG
CGGACTTCTTGTTTGCCTTGTCCAAGGTGAGCAAGAGTGTGGGGACGGGG
GATCTAAGTAAGTACCAGGAGTGGATGCAGGAGTTCGGCAGTGTGTAG back to topCoding sequence (CDS) from alignment at scaffold_7:336037..337734- >mRNA_2955 ID=mRNA_2955|Name=jgi.p|Nanoce1779_2|526697|organism=Nannochloropsis oceanica|type=CDS|length=4122bp|location=Sequence derived from alignment at scaffold_7:336037..337734- (Nannochloropsis oceanica)
TACCGCGGCGACAGCGAGAAGATGGTTCGGATTCTATTTGAAATGGCCCG
ATACTACGCCCCCTCAACCTTGTTCTTCGACGAGATCGACTCCATTGCTG
GCTCGCGGGGAGGGAGCGGCGAGCATGAGGCAAGCCGTCGGGTGAAGACT
GAGTTGATGGTTCAGATGGACGGCGTTGCGGATCAGAGCTCGCAGAAAGG
AGGGGGGGAGGAAGAGGGGGGGGAAGGGGGGGAAGAGGAACGACCGGGGA
GTAAGACTGTGATTGTGTTGGCGGCTACGAATACACCGTGGGATTTGGAC
GATGCGTTGAGGCGGAGGATGGAGAAACGGATCTACATTTCCCTGCCGAC
GGAGGAGGGGAGGAAGGAGTTGTTCAGGATTAATATGAAGGATATTGAGT
TGGGCGATGACCTTGATTTGGATATTTTGGCGAAGCAGACAGAGGGATAC
TCAGGGGCGGACATCGCGAACGTGTGTAGGGATGCAAGTATGATGAGCGT
GAGAAGGGTGGTGGAGGAGGCGCGGAAGCAGGGCTTGCATGGCTTGGAGA
TCCAGAAGGCGCTGATGGCTAATCGGGAGAAGTTACATTCCTCAACGGTA
ACCCAAGCGGACTTCTTGTTTGCCTTGTCCAAGGTGAGCAAGAGTGTGGG
GACGGGGGATCTAAGTAAGTACCAGGAGTGGATGCAGGAGTTCGGCAGTG
TGTAGACCACCAGGCACGGGCAAGACGATGCTGGCCAAGGCCGTGGCCAC
GGAGTGCGCCACCACCTTCTTTAATGTCTCTGCATCCACGCTCGGCTCCA
AGATGTCCACATCGGTCAACAGCAACCACCGGCGGACATCAGTAGGCTCC
CGTACCATCACAACCACCACCACTACTTCCTCCTCTTCCTCCTCTTCCTC
AGCCAGAGCCGATGGCAGCCGTATCCGTGCCCCGGTAAAACCTGTCTTGC
CCACCAACCCCTCCTCCGCTTTATCCCAAAACGCCCGACGAAACCAAGGC
CGCTGTGGTGGTGGAAACCCTCCCTCCCTTGATACCTCTGGGCCGTACGC
CGCTCTACACAAAAGCAACAGTAGCAACAGTAGCAACGGCAGCGGTGGGG
TTGGAGAAGGAGTAGAGAGCGACCCTCTCCCTTTGGCCGCGAACGGCAAG
CCGCGTTACAGCGACGTGGCGCGCGGGGAGGGCTGGGCTGACACGGAGCT
GATCGAGAGCATTGAAAGGGAGATTGTGGAGCAGGGGGTCAATGTATCAT
GGGAGTCCATAGCTGATTTGACGGAGGCGAAGCAGCTGCTGCAGGAGGCG
GTGGTGCTGCCTTTGTGGATGCCGGACTACTTCAAGGGGATCCGACGACC
CTGGAAGGGGGTATTATTGTTTGGTACCGCGGCGACAGCGAGAAGATGGT
TCGGATTCTATTTGAAATGGCCCGATACTACGCCCCCTCAACCTTGTTCT
TCGACGAGATCGACTCCATTGCTGGCTCGCGGGGAGGGAGCGGCGAGCAT
GAGGCAAGCCGTCGGGTGAAGACTGAGTTGATGGTTCAGATGGACGGCGT
TGCGGATCAGAGCTCGCAGAAAGGAGGGGGGGAGGAAGAGGGGGGGGAAG
GGGGGGAAGAGGAACGACCGGGGAGTAAGACTGTGATTGTGTTGGCGGCT
ACGAATACACCGTGGGATTTGGACGATGCGTTGAGGCGGAGGATGGAGAA
ACGGATCTACATTTCCCTGCCGACGGAGGAGGGGAGGAAGGAGTTGTTCA
GGATTAATATGAAGGATATTGAGTTGGGCGATGACCTTGATTTGGATATT
TTGGCGAAGCAGACAGAGGGATACTCAGGGGCGGACATCGCGAACGTGTG
TAGGGATGCAAGTATGATGAGCGTGAGAAGGGTGGTGGAGGAGGCGCGGA
AGCAGGGCTTGCATGGCTTGGAGATCCAGAAGGCGCTGATGGCTAATCGG
GAGAAGTTACATTCCTCAACGGTAACCCAAGCGGACTTCTTGTTTGCCTT
GTCCAAGGTGAGCAAGAGTGTGGGGACGGGGGATCTAAGTAAGTACCAGG
AGTGGATGCAGGAGTTCGGCAGTGTGTAGACCACCAGGCACGGGCAAGAC
GATGCTGGCCAAGGCCGTGGCCACGGAGTGCGCCACCACCTTCTTTAATG
TCTCTGCATCCACGCTCGGCTCCAAGATGTCCACATCGGTCAACAGCAAC
CACCGGCGGACATCAGTAGGCTCCCGTACCATCACAACCACCACCACTAC
TTCCTCCTCTTCCTCCTCTTCCTCAGCCAGAGCCGATGGCAGCCGTATCC
GTGCCCCGGTAAAACCTGTCTTGCCCACCAACCCCTCCTCCGCTTTATCC
CAAAACGCCCGACGAAACCAAGGCCGCTGTGGTGGTGGAAACCCTCCCTC
CCTTGATACCTCTGGGCCGTACGCCGCTCTACACAAAAGCAACAGTAGCA
ACAGTAGCAACGGCAGCGGTGGGGTTGGAGAAGGAGTAGAGAGCGACCCT
CTCCCTTTGGCCGCGAACGGCAAGCCGCGTTACAGCGACGTGGCGCGCGG
GGAGGGCTGGGCTGACACGGAGCTGATCGAGAGCATTGAAAGGGAGATTG
TGGAGCAGGGGGTCAATGTATCATGGGAGTCCATAGCTGATTTGACGGAG
GCGAAGCAGCTGCTGCAGGAGGCGGTGGTGCTGCCTTTGTGGATGCCGGA
CTACTTCAAGGGGATCCGACGACCCTGGAAGGGGGTATTATTGTTTGGTA
CCGCGGCGACAGCGAGAAGATGGTTCGGATTCTATTTGAAATGGCCCGAT
ACTACGCCCCCTCAACCTTGTTCTTCGACGAGATCGACTCCATTGCTGGC
TCGCGGGGAGGGAGCGGCGAGCATGAGGCAAGCCGTCGGGTGAAGACTGA
GTTGATGGTTCAGATGGACGGCGTTGCGGATCAGAGCTCGCAGAAAGGAG
GGGGGGAGGAAGAGGGGGGGGAAGGGGGGGAAGAGGAACGACCGGGGAGT
AAGACTGTGATTGTGTTGGCGGCTACGAATACACCGTGGGATTTGGACGA
TGCGTTGAGGCGGAGGATGGAGAAACGGATCTACATTTCCCTGCCGACGG
AGGAGGGGAGGAAGGAGTTGTTCAGGATTAATATGAAGGATATTGAGTTG
GGCGATGACCTTGATTTGGATATTTTGGCGAAGCAGACAGAGGGATACTC
AGGGGCGGACATCGCGAACGTGTGTAGGGATGCAAGTATGATGAGCGTGA
GAAGGGTGGTGGAGGAGGCGCGGAAGCAGGGCTTGCATGGCTTGGAGATC
CAGAAGGCGCTGATGGCTAATCGGGAGAAGTTACATTCCTCAACGGTAAC
CCAAGCGGACTTCTTGTTTGCCTTGTCCAAGGTGAGCAAGAGTGTGGGGA
CGGGGGATCTAAGTAAGTACCAGGAGTGGATGCAGGAGTTCGGCAGTGTG
TAGACCACCAGGCACGGGCAAGACGATGCTGGCCAAGGCCGTGGCCACGG
AGTGCGCCACCACCTTCTTTAATGTCTCTGCATCCACGCTCGGCTCCAAG
ATGTCCACATCGGTCAACAGCAACCACCGGCGGACATCAGTAGGCTCCCG
TACCATCACAACCACCACCACTACTTCCTCCTCTTCCTCCTCTTCCTCAG
CCAGAGCCGATGGCAGCCGTATCCGTGCCCCGGTAAAACCTGTCTTGCCC
ACCAACCCCTCCTCCGCTTTATCCCAAAACGCCCGACGAAACCAAGGCCG
CTGTGGTGGTGGAAACCCTCCCTCCCTTGATACCTCTGGGCCGTACGCCG
CTCTACACAAAAGCAACAGTAGCAACAGTAGCAACGGCAGCGGTGGGGTT
GGAGAAGGAGTAGAGAGCGACCCTCTCCCTTTGGCCGCGAACGGCAAGCC
GCGTTACAGCGACGTGGCGCGCGGGGAGGGCTGGGCTGACACGGAGCTGA
TCGAGAGCATTGAAAGGGAGATTGTGGAGCAGGGGGTCAATGTATCATGG
GAGTCCATAGCTGATTTGACGGAGGCGAAGCAGCTGCTGCAGGAGGCGGT
GGTGCTGCCTTTGTGGATGCCGGACTACTTCAAGGGGATCCGACGACCCT
GGAAGGGGGTATTATTGTTTGG back to top
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