NO04G04250, NO04G04250 (gene) Nannochloropsis oceanica

Overview
NameNO04G04250
Unique NameNO04G04250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length633
Alignment locationchr4:1154487..1155119 -

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Properties
Property NameValue
DescriptionAurora kinase a
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1154487..1155119 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: EWM28738.1 (aurora kinase a [Nannochloropsis gaditana])

HSP 1 Score: 175.3 bits (443), Expect = 2.100e-40
Identity = 79/107 (73.83%), Postives = 95/107 (88.79%), Query Frame = 0 
Query:    1 MLRHDGRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWMLLY 108
            MLRHDG+GYAESVDTWSVGVLCYEFLVGRTPFR+SSPV FQE++D EGEALK  EG+MF NI++G+++FP Y+S AA+DFI KLL+V+T  RMTL EAMRHPWM ++
Sbjct:  600 MLRHDGKGYAESVDTWSVGVLCYEFLVGRTPFRRSSPVTFQEEDDVEGEALKNFEGSMFENIMDGKVSFPLYMSRAAQDFIEKLLIVDTRVRMTLQEAMRHPWMRMH 706
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: KIO16834.1 (hypothetical protein M407DRAFT_33512 [Tulasnella calospora MUT 4182])

HSP 1 Score: 88.6 bits (218), Expect = 2.500e-14
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 0 
Query:    5 DGRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWML 106
            +G+ Y E VD W++GVL YEFL GR PF         ED+DE+           +  I+  R  FP++VSE AKD I KLLV   ++RM+LSE + HPW+L
Sbjct:   63 EGKAYNEKVDHWAIGVLAYEFLCGRPPF---------EDKDEK---------ATYKRIVRVRYQFPSHVSEEAKDLIGKLLVYNPDKRMSLSEVLEHPWIL 145
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: KIO25684.1 (hypothetical protein M407DRAFT_75349 [Tulasnella calospora MUT 4182])

HSP 1 Score: 88.6 bits (218), Expect = 2.500e-14
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 0 
Query:    5 DGRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWML 106
            +G+ Y E VD W++GVL YEFL GR PF         ED+DE+           +  I+  R  FP++VSE AKD I KLLV   ++RM+LSE + HPW+L
Sbjct:  246 EGKAYNEKVDHWAIGVLAYEFLCGRPPF---------EDKDEK---------ATYKRIVRVRYQFPSHVSEEAKDLIGKLLVYNPDKRMSLSEVLEHPWIL 328
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: EJU03054.1 (kinase-like protein [Dacryopinax primogenitus])

HSP 1 Score: 83.6 bits (205), Expect = 8.200e-13
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0 
Query:    1 MLRHDGRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWMLLYAHQAT 113
            M+ H  + + E VD W++GVL YEFL G+ PF         E+ D++           +  I E R +FPTYVS  AKDFIS+LL  E  +RM LSE + HPW+  Y H+ +
Sbjct:  195 MVEH--KQHDEKVDLWALGVLSYEFLCGKPPF---------EEPDQQ---------ATYRRIKEVRYSFPTYVSPEAKDFISRLLQYEPPKRMPLSEVLVHPWLEKYRHRGS 286
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: CRG92744.1 (aurora kinase, other [Talaromyces islandicus])

HSP 1 Score: 82.8 bits (203), Expect = 1.400e-12
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 0 
Query:    6 GRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWMLLYAHQA 112
            G+ Y E VD WS+GVL YEFLVGR PF + +PVM                      I  G +  P++VS  A+D I KLLV+++ERR++L +  +HPW++ +   A
Sbjct:  357 GKPYDEKVDVWSLGVLMYEFLVGRAPF-EDTPVMTHR------------------RIARGDMTIPSFVSPEARDLIKKLLVLDSERRLSLEKVQQHPWIIKHCEIA 443
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: XP_001750766.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ84471.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 82.4 bits (202), Expect = 1.800e-12
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0 
Query:    5 DGRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWML 106
            +G+ +  +VD WS+GVLCYEF+VG  PF              E E  ++     +  I++  L+FP Y+SE A+DF+SKLL  + E+RM L  A++HPW++
Sbjct:  183 EGKAHDANVDLWSLGVLCYEFMVGNPPF--------------EAEGHRD----TYRRIVKVDLHFPDYISEGARDFVSKLLQHDPEKRMRLDMALQHPWLV 265
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: XP_002478741.1 (serine/threonine protein kinase (Ark1), putative [Talaromyces stipitatus ATCC 10500] >EED21778.1 serine/threonine protein kinase (Ark1), putative [Talaromyces stipitatus ATCC 10500])

HSP 1 Score: 82.0 bits (201), Expect = 2.400e-12
Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 0 
Query:    9 YAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWML 106
            Y++ VD WS+GVL YEFLVG  PF + +PVM Q                    I    +  P++VS  A+DFI +LLV++ E+RMT+ EA +HPW+L
Sbjct:  284 YSDKVDLWSLGVLTYEFLVGEAPF-EDTPVMTQR------------------RITRADMTIPSFVSPEARDFIKRLLVLDPEKRMTIDEAQQHPWIL 361
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: XP_018301927.1 (PREDICTED: aurora kinase C-like [Trachymyrmex zeteki] >KYQ56444.1 Serine/threonine-protein kinase 6-A [Trachymyrmex zeteki])

HSP 1 Score: 82.0 bits (201), Expect = 2.400e-12
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 0 
Query:    6 GRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWML 106
            G+ +  +VD WSVGVLCYE LVG+ PF       +    DE            + NI   R NFP +VSE AKDFISKL++++ E+R+ +   + HPW++
Sbjct:  310 GKTHNHTVDFWSVGVLCYECLVGKPPF-------YATTNDE-----------TYVNIKRLRYNFPNFVSEDAKDFISKLIIIDPEKRLDMDGVLAHPWIV 391
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: NP_001164000.1 (aurora kinase A [Tribolium castaneum] >EFA12426.1 aurora kinase A [Tribolium castaneum])

HSP 1 Score: 81.6 bits (200), Expect = 3.100e-12
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 0 
Query:    6 GRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWMLLYAHQ 111
            G+ + E VD WS+GVLC+EFL G+ PF   +   F+E                + NI +    FP YVSE A+D I KLLVV    R+ LS+ M+HPW++ +  +
Sbjct:  232 GQTHNEKVDLWSLGVLCFEFLTGKPPFEAPT---FEE---------------TYRNISKAYYKFPPYVSEGAQDLIRKLLVVNPNERLELSQVMKHPWIVSHTEE 318
[Close]
BLAST of NO04G04250 vs. NCBI_GenBank
Match: XP_007805060.1 (hypothetical protein EPUS_04007 [Endocarpon pusillum Z07020] >ERF69302.1 hypothetical protein EPUS_04007 [Endocarpon pusillum Z07020])

HSP 1 Score: 81.6 bits (200), Expect = 3.100e-12
Identity = 43/105 (40.95%), Postives = 57/105 (54.29%), Query Frame = 0 
Query:    9 YAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEALKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMRHPWMLLYAHQATG 114
            Y E VD WS+GVL YEFLVG  PF + +PVM Q                    I  G +  P++VS  AKD I +LLV++ E+R+ L E  RHPW++ +  Q  G
Sbjct:  311 YNEKVDLWSLGVLTYEFLVGEAPF-EDTPVMTQR------------------RIARGEMTVPSFVSAEAKDLIQRLLVLDPEKRIPLDEVQRHPWIVKHCVQKGG 396
The following BLAST results are available for this feature:
BLAST of NO04G04250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28738.12.100e-4073.83aurora kinase a [Nannochloropsis gaditana][more]
KIO16834.12.500e-1444.55hypothetical protein M407DRAFT_33512 [Tulasnella c... [more]
KIO25684.12.500e-1444.55hypothetical protein M407DRAFT_75349 [Tulasnella c... [more]
EJU03054.18.200e-1341.07kinase-like protein [Dacryopinax primogenitus][more]
CRG92744.11.400e-1239.62aurora kinase, other [Talaromyces islandicus][more]
XP_001750766.11.800e-1239.60hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_002478741.12.400e-1242.27serine/threonine protein kinase (Ark1), putative [... [more]
XP_018301927.12.400e-1241.00PREDICTED: aurora kinase C-like [Trachymyrmex zete... [more]
NP_001164000.13.100e-1239.05aurora kinase A [Tribolium castaneum] >EFA12426.1 ... [more]
XP_007805060.13.100e-1240.95hypothetical protein EPUS_04007 [Endocarpon pusill... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04250.1NO04G04250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524386gene_2213Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04250.1NO04G04250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04250 ID=NO04G04250|Name=NO04G04250|organism=Nannochloropsis oceanica|type=gene|length=633bp
ATGCTGCGGCATGACGGGAGGGGATATGCGGAGAGTGTAGACACGTGGTC
GGTGGGGGTGCTGTGCTACGAGTTTCTGGTGGGCCGGACCCCGTTTCGAA
AGTCGAGCCCAGTGATGTTCCAGGAGGACGAGGACGAGGAGGGGGAGGCC
TTGAAGGAGCAGGAGGGGACCATGTTTGCGAACATCTTGGAGGGGAGGTT
GAATTTTCCCACGTATGTCTCGGAGGCTGCGAAGGATTTTATCAGTAAGT
TGTTGGTGGTGGAGACGGAGAGAAGGATGACTTTGAGTGAGGCGATGCGC
CACCCCTGGATGCTGCTCTATGCACATCAGGCAACAGGACTGCTACAACA
GCAGCGACAGCAACAGCAACAGCGGCGGCAGCCTATTATATCACCGGTGG
AATCGTCTGGATATGGATATGGCGGAAGGGGAATATCTGCCGCTGGCTCT
GCCATGAAAAACAGGAGTGATAAAAGCGGCAGCAACAGTAGCAGCGGCAA
TGGCAGCAGTGATATAAACAAGATGGTGGGGGTGGGAAGGCGAATTAAGT
CATGTTCATATTCTTCTGCAATGCCGAGACGGCAAGCAGGGGTCATCTTG
CCTTTGTCTACCAGGCCAGCCTGGACCGAGTAA
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protein sequence of NO04G04250.1

>NO04G04250.1-protein ID=NO04G04250.1-protein|Name=NO04G04250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bp
MLRHDGRGYAESVDTWSVGVLCYEFLVGRTPFRKSSPVMFQEDEDEEGEA
LKEQEGTMFANILEGRLNFPTYVSEAAKDFISKLLVVETERRMTLSEAMR
HPWMLLYAHQATGLLQQQRQQQQQRRQPIISPVESSGYGYGGRGISAAGS
AMKNRSDKSGSNSSSGNGSSDINKMVGVGRRIKSCSYSSAMPRRQAGVIL
PLSTRPAWTE*
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Synonyms
Publications