NO04G02880, NO04G02880 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G02880
Unique Name	NO04G02880
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	6153
Alignment location	chr4:755627..761779 -

Link to JBrowse

Properties


Property Name	Value
Description	Meiosis-specific DEAD-box helicase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:755627..761779 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding
GO:0016787	hydrolase activity
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR011545	DEAD/DEAH_box_helicase_dom
IPR004179	Sec63-dom
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd

Homology

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BLAST of NO04G02880 vs. NCBI_GenBank
Match: EWM28662.1 (Meiosis-specific DEAD-box helicase [Nannochloropsis gaditana])

HSP 1 Score: 1001.1 bits (2587), Expect = 3.900e-288
Identity = 507/685 (74.01%), Postives = 576/685 (84.09%), Query Frame = 0

Query:  109 PADRSASDNSYVGSSGRQ---QQLGFTVDLDREFGGEYRNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGDMHRKWRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDSAGLREVAASHILFATPEKFDAVSRDWRENLYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAALLPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTI----SGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVSSPVRKAEKRSLNDLLKRVRFSKGIGIKRCTLPPHKAFVLVQACLGNLEITDFTLKL 787
            P   S  ++S +    R+   Q LGF VDLDRE GG++RNLWPYR+LN VQS+FW VC NTD NVVIAAPTGVGKTMALEAAICRLL E E  G+  + W+ VY+APVKALCQQRL+DW+ RF ++FGLKCAELTGDSAG+REVAAS I+  TPEKFDAVSRDWR+NLYLLGSVRLVLIDEAHFLGEDPRGSALE+LICRL+V+K+HK I++KGLPASK+RILA SATLPNV+D+G WLEAP EA FNFDYT RPVPL++H+L YANASNPFLFQRTLE RA +VI +YSEGKATLVFCGSKKGAE LA+KLA+  S  +  G  +  RG   GR QQ+ E  ERF+ +QN KLKDLL++  GAVAFHHAGL+AEDR CVE LFQQGVVR LCSTSTLAQGINSPAFLAIILGTTFWRGAG GYEDLPVSAVLQMIGRAGRPG DDRGVAVIMTSK+KEL Y SMA+GQEVVESQLPARFHE+LNAEVCS+VISDL GA+RWL+STFLWVRAHRNP +Y ALLPR     + DNS+G  L+AYMLR LAEL+AE VLRL E T+     G+ I +L  +N   +VP+V GRVMSKT+VSF+TIK+L+A+P DASLE LLYAC  CPEV +PVRKAEKR LNDLLKRVRFSKG+GIK+CT P HKAFVLVQACLGNLEI DFTLK+
Sbjct:   16 PHTTSKLESSMISGPNREPYSQPLGFAVDLDRELGGKFRNLWPYRILNEVQSAFWPVCFNTDHNVVIAAPTGVGKTMALEAAICRLLQEDEGTGNGRKTWKAVYVAPVKALCQQRLVDWQRRFETRFGLKCAELTGDSAGMREVAASQIILTTPEKFDAVSRDWRDNLYLLGSVRLVLIDEAHFLGEDPRGSALEALICRLRVMKSHKVIMDKGLPASKLRILAASATLPNVEDIGRWLEAPPEATFNFDYTHRPVPLEIHVLGYANASNPFLFQRTLEGRAPEVIGRYSEGKATLVFCGSKKGAEALATKLAEAGS-GLGLGNKQLGRGGMQGRSQQRLE-AERFSNIQNHKLKDLLLTSDGAVAFHHAGLTAEDRTCVETLFQQGVVRTLCSTSTLAQGINSPAFLAIILGTTFWRGAGTGYEDLPVSAVLQMIGRAGRPGNDDRGVAVIMTSKEKELMYMSMAEGQEVVESQLPARFHESLNAEVCSNVISDLGGAIRWLRSTFLWVRAHRNPDYYTALLPRGTICRDADNSIGEYLKAYMLRILAELQAENVLRL-EKTVGLSRDGAPIDNLETEN---IVPLVAGRVMSKTLVSFETIKVLRAVPSDASLEALLYACCGCPEVCNPVRKAEKRPLNDLLKRVRFSKGLGIKKCTHPSHKAFVLVQACLGNLEIVDFTLKV 694

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BLAST of NO04G02880 vs. NCBI_GenBank
Match: CBN74377.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 465.7 bits (1197), Expect = 5.900e-127
Identity = 297/817 (36.35%), Postives = 440/817 (53.86%), Query Frame = 0

Query:  127 QQLGFTVDLDREFGGEYRNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGDMHRKWRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGD--------SAGLREVAASHILFATPEKFDAVSRDWRENLYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAALLPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVSSPVRKAEKRSLNDLLKRVRFSKGIGIKRCTLPPHKAFVLVQACLGNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGG--GAYLSLLLARSLRARMW-ETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVSQVEGKPGTRGNMATLVVELTRSTSSSGDG 933
            +Q+   V +   +  E   +WP++  N++QS+ +     +D+NVV++APTG GKT+ LE AI RL  ES   G      +V+YI+P+KALCQQ L DW A+F S  G++ AELT D        S  LR++A++ ++  TPEK+D+++R W+E+ +L+G+V LVL+DE H +GE+ RG+ LE ++ R+K++     +V  GLPAS+MR +A+SATLPN +D G++L A    VF F   FRPVPL  H+  Y + S PFLF R L +R    +++YS GK +LVFCGSKK  ET+AS LA  T    R G           +   QY      T    Q  K ++      VA H++GLS  DR  VE  F  G + VL +T+TLA G+N PA L +I GT  +RGA  GY+++P SA+LQMIGRAGR GFD  GVAV+MTS+  + A   ++ GQE VES L A+  EA N+E+                         RN    A ++  D+                                                +  +V P   G + S+ MV F+++K++  +  +    ++L  C+ C EV+ P+R+AEKR LNDL ++VR+      +    P  KA VL+QA LG L + D+TL+ E   ++DT +R++         +GRGG  G  +SL L RS+R R+W + ER +  L+Q+ G+G  +  +L  +GI T  DL  +   K++A   R+HP+G  + H    +L  +L   VS+ +   G R  +   V    ++T    DG
Sbjct:  250 RQMPSLVGVKDVYPPELSRIWPFQNFNAIQSALFQTAAKSDKNVVVSAPTGCGKTVVLEMAIARLWQES---GGTLGNRKVIYISPIKALCQQTLDDWTAKF-SPLGIRLAELTSDSTSGPSKGSVSLRDLASADVILTTPEKWDSITRRWKEHAFLVGTVALVLVDEVHTIGEE-RGATLEVILARMKMVSRSTEVVSMGLPASRMRFIALSATLPNANDFGSFLGA---EVFRFGDEFRPVPLQTHVAGYPSGSKPFLFDRGLNNRVAGTVARYSNGKPSLVFCGSKKDTETVASSLAKGTDYARRTG----------SQVVMQYLATAANTAEDPQLAKLMM----RGVAIHNSGLSPRDRGLVERAFLSGSIAVLVATTTLAMGVNLPARLVVIKGTNQYRGAQ-GYKEMPRSAILQMIGRAGRQGFDSSGVAVVMTSERNKKALERLSAGQEAVESSLQAKLLEAFNSEL-------------------------RN----AGVIAMDD------------------------------------------------DEFSVQPTPHGVLFSRFMVRFESMKVILEVSENHGTRDILRVCAECNEVNVPLRRAEKRFLNDLNQKVRYPPP-KKEVVRTPADKALVLLQAALGGLHLDDWTLRGEQTAMLDTSARLLGCCAESLAVAGRGGGLGCAVSLRLMRSVRLRLWMDAERGQ--LKQLPGVGDTMSGRLEASGIITLTDLGCSTSVKVDAITGRKHPFGNGIRHAALQLLTRALTASVSRQQMGDG-RQELQVRVEPAFQTTDPFSDG 962

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BLAST of NO04G02880 vs. NCBI_GenBank
Match: PNR53527.1 (hypothetical protein PHYPA_007202 [Physcomitrella patens])

HSP 1 Score: 430.3 bits (1105), Expect = 2.800e-116
Identity = 292/815 (35.83%), Postives = 433/815 (53.13%), Query Frame = 0

Query:  143 YRNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGDMHRKW-----RVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDS--AGLREVAASHILFATPEKFDAVSRDWRE--NLYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQ--NQKLKDL-LVSC-GGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAAL--LPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVS-SPVRKAEKRSLN----DLLKRVRF----SKGIGIKRCTLPPHKAFVLVQACL-GNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVSQVEGK--PGTRGNMATLVVELTRSTSSSG 931
            +++++P+R  N+VQS  +A    +D N+VI+APTG GKT+  E  I R LLE     + H K      + VYIAP+KAL Q +L DW  RF S  G+KC ELTGDS    + E+  + I+  TPEKFD ++R  R+   +   G + L+LIDE H L E  RG+ALE+++ RLK++     I  KG P S +R +AVSAT+PN++DL  WL  P   +  F   +RPV L   +L Y  A N FLF+R L+   +D++  +SEGK +LVFC ++KGA+  A  L+ + S                G      + +E F  LQ   Q+  D+ +  C    V +H+ GLS EDR  +E LF  G + VLC+TSTLAQG+N PA   II  T ++      Y +   SA+LQM GRAGRP FDD GV VIMT KD    Y ++  G E VESQL +   E LNAE+    +SD   A+ WL+ ++L+VR  +NP++Y     +PRD    +++N    +L+   ++ + EL    +++  E                  + P+  GR+M K  + F+T+K +      A++EELL+  +   E+S   +R+ EK+ LN    D+  R+R+    S G   KR      K F+LV   L G   +TDFT+  +   I  T +RI R    + +   R      +LLL++ L+ R+WE+   K  L+Q+ G+G+     L  AG+ +F+ L +  P ++EA   R+ P+G +        L  SLN    +VE       R +   L +     + SSG
Sbjct:   20 FQSVFPFRYFNAVQSESFAEVFLSDDNLVISAPTGSGKTVLFELCILR-LLEKFLTTEGHFKHVSGARKAVYIAPMKALVQDKLRDWTLRF-SSLGVKCQELTGDSGPTNVGEMIDTDIILTTPEKFDVITRRHRDRGGMSFFGDIALILIDEVHLLSE-TRGAALEAVVSRLKMLARFPEI--KGSPLSTIRFVAVSATVPNIEDLAEWLHVPKNGMKRFGEEYRPVKLTTTVLGYQPAKNDFLFERRLQQYLLDILLHHSEGKPSLVFCSTRKGAQDTAVALSQSVS--------------QHGNHNPFVKNLEHFKRLQLAAQRTNDVHMQQCIRSGVGYHNGGLSMEDRGLIEGLFLTGDLLVLCTTSTLAQGVNLPAHAVIIKSTQYYNKLKGCYVEYERSAILQMSGRAGRPQFDDSGVVVIMTRKDSVHLYHNLLSGSEPVESQLLSSIVEHLNAEIVLMTVSDCSQAIDWLKCSYLYVRIKKNPQYYCVKQGVPRD----QLEN----KLKDICVQNVNELAKYGMVKTDE--------------FGYVLTPLEPGRIMEKYYMQFETMKAITKAAERATIEELLHVLANAAELSWIKLRRDEKKRLNDINGDISGRIRYHVNNSNGKLKKRIQSGAEKIFILVNDALSGEPSVTDFTMSQDINGICTTGTRICRCMSEYFIFMKRFTEIRNALLLSKCLKQRLWES--TKYQLKQLVGVGLVTAKALITAGVDSFEKLASADPRRLEAITGRKFPYGDQ--------LKASLNDAPPKVEMNLFESERDDQCLLTLHRVSQSQSSG 783

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BLAST of NO04G02880 vs. NCBI_GenBank
Match: XP_024376295.1 (DExH-box ATP-dependent RNA helicase DExH17-like isoform X3 [Physcomitrella patens])

HSP 1 Score: 430.3 bits (1105), Expect = 2.800e-116
Identity = 292/815 (35.83%), Postives = 433/815 (53.13%), Query Frame = 0

Query:  143 YRNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGDMHRKW-----RVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDS--AGLREVAASHILFATPEKFDAVSRDWRE--NLYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQ--NQKLKDL-LVSC-GGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAAL--LPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVS-SPVRKAEKRSLN----DLLKRVRF----SKGIGIKRCTLPPHKAFVLVQACL-GNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVSQVEGK--PGTRGNMATLVVELTRSTSSSG 931
            +++++P+R  N+VQS  +A    +D N+VI+APTG GKT+  E  I R LLE     + H K      + VYIAP+KAL Q +L DW  RF S  G+KC ELTGDS    + E+  + I+  TPEKFD ++R  R+   +   G + L+LIDE H L E  RG+ALE+++ RLK++     I  KG P S +R +AVSAT+PN++DL  WL  P   +  F   +RPV L   +L Y  A N FLF+R L+   +D++  +SEGK +LVFC ++KGA+  A  L+ + S                G      + +E F  LQ   Q+  D+ +  C    V +H+ GLS EDR  +E LF  G + VLC+TSTLAQG+N PA   II  T ++      Y +   SA+LQM GRAGRP FDD GV VIMT KD    Y ++  G E VESQL +   E LNAE+    +SD   A+ WL+ ++L+VR  +NP++Y     +PRD    +++N    +L+   ++ + EL    +++  E                  + P+  GR+M K  + F+T+K +      A++EELL+  +   E+S   +R+ EK+ LN    D+  R+R+    S G   KR      K F+LV   L G   +TDFT+  +   I  T +RI R    + +   R      +LLL++ L+ R+WE+   K  L+Q+ G+G+     L  AG+ +F+ L +  P ++EA   R+ P+G +        L  SLN    +VE       R +   L +     + SSG
Sbjct:   20 FQSVFPFRYFNAVQSESFAEVFLSDDNLVISAPTGSGKTVLFELCILR-LLEKFLTTEGHFKHVSGARKAVYIAPMKALVQDKLRDWTLRF-SSLGVKCQELTGDSGPTNVGEMIDTDIILTTPEKFDVITRRHRDRGGMSFFGDIALILIDEVHLLSE-TRGAALEAVVSRLKMLARFPEI--KGSPLSTIRFVAVSATVPNIEDLAEWLHVPKNGMKRFGEEYRPVKLTTTVLGYQPAKNDFLFERRLQQYLLDILLHHSEGKPSLVFCSTRKGAQDTAVALSQSVS--------------QHGNHNPFVKNLEHFKRLQLAAQRTNDVHMQQCIRSGVGYHNGGLSMEDRGLIEGLFLTGDLLVLCTTSTLAQGVNLPAHAVIIKSTQYYNKLKGCYVEYERSAILQMSGRAGRPQFDDSGVVVIMTRKDSVHLYHNLLSGSEPVESQLLSSIVEHLNAEIVLMTVSDCSQAIDWLKCSYLYVRIKKNPQYYCVKQGVPRD----QLEN----KLKDICVQNVNELAKYGMVKTDE--------------FGYVLTPLEPGRIMEKYYMQFETMKAITKAAERATIEELLHVLANAAELSWIKLRRDEKKRLNDINGDISGRIRYHVNNSNGKLKKRIQSGAEKIFILVNDALSGEPSVTDFTMSQDINGICTTGTRICRCMSEYFIFMKRFTEIRNALLLSKCLKQRLWES--TKYQLKQLVGVGLVTAKALITAGVDSFEKLASADPRRLEAITGRKFPYGDQ--------LKASLNDAPPKVEMNLFESERDDQCLLTLHRVSQSQSSG 783

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BLAST of NO04G02880 vs. NCBI_GenBank
Match: XP_022962158.1 (DExH-box ATP-dependent RNA helicase DExH17 [Cucurbita moschata])

HSP 1 Score: 427.9 bits (1099), Expect = 1.400e-115
Identity = 282/799 (35.29%), Postives = 434/799 (54.32%), Query Frame = 0

Query:  144 RNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGD-MHRK--WRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDSA--GLREVAASHILFATPEKFDAVSRDWREN--LYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAALLPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVS-SPVRKAEKRSLNDLLK----RVRF----SKGIGIKRCTLPPHKAFVLVQACL-GNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVSQVE-GKPGTRGNMATLVVELTR 925
            R+ + +R  NS+QS  + VC N+D N+VI+APTG GKT+  E  I RLL +  + G  +H K   + +YIAP KAL Q++L DW  +FGS +G+ C ELTGD+    ++ +  + I+  TPEKFDAV+R   ++  L   G + LVLIDE H L  DPRG+ALE+++ R+K+I  +  +  K  P S +R LAVSAT+PN+ DL  WL  P + V  F    RPV L   +  YA A N F+F++ L++   DV+ +YS+GK+ LVFC ++KGA+  A +L+ T    M  G           + ++Q E++   +   + K     +  G  V +H+ GL  +DR  +E LF +G +RV+C+T+TLA GIN PA   II  T  +      Y +   S +LQM GRAGRP FDD G+ +IMT +D    Y ++ +G E VESQL +   E L AE+    ISD+  A+ W++ ++L+VR  +NP+ YA    R+  S    ++    +    +  + EL   +++ + E              +   + P+  GR+M+K  + F T+K +   P + SLEE L+      E++   +R+ EK+ LND+      R+RF     KG   KR      K F+L   CL G+  I D +L  +  +I     RI +  + + V      G + S+LLA+SL  ++W+      LL+Q+ GIG+     L   GI +F+ L    P KIE    R++P+G  +   +S  L   +++++ + E G+ G     A L+V LTR
Sbjct:  100 RSTFSFRYFNSLQSECFPVCFNSDSNMVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQKFGS-WGVSCLELTGDNETYNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFGDIALVLIDEVHLL-NDPRGAALEAIVSRIKMISRNPEM--KSSPLSHVRFLAVSATIPNIGDLAEWLNVPVQGVKRFGEEMRPVKLTSKVFGYAPAKNDFMFEKRLQNYIFDVLMQYSKGKSALVFCSTRKGAQEAAQRLSQT---AMTFGYSNPFI-----KSKEQLERLREASLSCSDKQMQSNILYG--VGYHNGGLCLKDRNLIESLFLKGDIRVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCETVESQLLSCVTEHLTAEIVQMTISDIVKAIEWMKCSYLYVRMKKNPQKYAI---RNRIS---YHNTEKHMEDICIEKVNELSRHQMIWMDE--------------DGFLLKPLDPGRLMTKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEIAWIQLRRTEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSIHDLSLSQDMSSICSNGCRIAKCMKEYFVYRKNYKGTFSSMLLAKSLYQKLWDD--SPFLLKQLPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSS-LPPEVDLKLEEAECGRQG----KAKLIVTLTR 857

[Close]

BLAST of NO04G02880 vs. NCBI_GenBank
Match: XP_009334110.1 (PREDICTED: DExH-box ATP-dependent RNA helicase DExH17 isoform X3 [Pyrus x bretschneideri])

HSP 1 Score: 426.0 bits (1094), Expect = 5.200e-115
Identity = 277/819 (33.82%), Postives = 437/819 (53.36%), Query Frame = 0

Query:  131 FTVDLDREFGGEYRNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRL----LLESESVGDMHRKWRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGD--SAGLREVAASHILFATPEKFDAVSRDWREN--LYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAA--LLPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVS-SPVRKAEKRSLNDLLK----RVRF----SKGIGIKRCTLPPHKAFVLVQACL-GNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVS-QVEGKPGTRGNMATLVVELTRSTSS 929
            +T+    +    +R+ + +R  NS+QS  + VC ++D N+V++APTG GKT+  E  I RL    L E   +G  +   + +YIAP KAL Q+++ DW  +FGS +G+ C ELTGD  S  +R +  + I+  TPEKFDAV+R   ++  +     + L+LIDE H L  DPRG+ LE+++ R+K++  +  +    L  + +R LAVSAT+PN++DL  WL+ P + +  F    RPV L   +  Y  A N FLF++ L++   DV+ +YS GK+ LVFC ++KGA+  A +L  T   VM  G           + ++Q E++   +     K     +  G  V +H+ GLS +DR  +E LF +G +++LC+T+TLA GIN PA   +I  T  +      Y +   S +LQM GRAGRP FDD G+ VIMT KD    Y ++ +G E+VESQL +   E L AE+    +SD+  A+ W++ +FL+VR  +NP HY+   ++ +D         +   ++   L+ + EL   +++               + ++   + P+  GR+M+K  + F T+K +   P + SLE+ L+      E+S   +R++EK+ LND+      R+RF     KG   KR      K FVL   CL G+  + D +L  +  +I     RI R  + F +      GA  S+LLA+SL  ++W+      LL+Q+ GIG+     L   G+ +F  L    P +IE    R++P+G    HL   +  +SL  +V  +VE     R     LVV LTR +++
Sbjct:    4 YTLKSMSDLPAPFRSSFNFRYFNSLQSECFPVCFHSDTNMVVSAPTGSGKTVIFELCILRLLSRFLSEDGRLGRTNGTLKTIYIAPSKALVQEKVRDWNQKFGS-WGITCLELTGDNESYNVRNIQEADIILTTPEKFDAVTRYRAKDGGMSFFSDIALLLIDEVHLL-NDPRGAVLEAIVSRIKMLAQNPELKSSSL--AHVRFLAVSATIPNIEDLAEWLKVPVQGIKRFGEEMRPVKLTTKVFGYTPAKNDFLFEKRLQNYIFDVLMQYSRGKSALVFCSTRKGAQEAAQRLTQT---VMAFG-----HSNPFIKSKEQQERLREASFSCGDKQMQSYIPYG--VGYHNGGLSMKDRNLIESLFLKGDIQILCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGMVVIMTRKDTVHLYENLLNGCEMVESQLLSCLTEHLTAEIVQLTVSDIPRAIEWMKCSFLYVRMKKNPVHYSVRKVISKDR--------IEKHMQEVCLKKVNELSQHQMI--------------WTDKDGFLLKPLEPGRLMTKYYLKFDTMKHIMQTPVNCSLEDALHVICRAEEISWIQLRRSEKKLLNDINADKDGRLRFHVLGDKGKRQKRIQTREEKTFVLANDCLTGDPLVHDLSLTQDMNSICSNGCRIARCMKEFFIYQKNYKGALNSMLLAKSLYQKLWDD--SPYLLKQLPGIGMVTAKALHSMGVRSFDTLAEADPRRIEIVTGRKYPFG---NHLKESL--HSLPPKVEMKVEENECQRQGKLKLVVTLTRLSAT 779

[Close]

BLAST of NO04G02880 vs. NCBI_GenBank
Match: XP_023527908.1 (DExH-box ATP-dependent RNA helicase DExH17 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425.2 bits (1092), Expect = 8.900e-115
Identity = 282/803 (35.12%), Postives = 434/803 (54.05%), Query Frame = 0

Query:  144 RNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGD-MHRK--WRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDSA--GLREVAASHILFATPEKFDAVSRDWREN--LYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAALLPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVS-SPVRKAEKRSLNDLLK----RVRF----SKGIGIKRCTLPPHKAFVLVQACL-GNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVSQVE-GKPGTRGNMATLVVELTRSTSS 929
            R+ + +R  NS+QS  + VC N+D N+VI+APTG GKT+  E  I RLL +  + G  +H K   + +YIAP KAL Q++L DW  +FGS +G+ C ELTGD+    ++ +  + I+  TPEKFDAV+R   ++  L     + LVLIDE H L  DPRG+ALE+++ R+K+I  +  +  K  P S +R LAVSAT+PN+ DL  WL  P + V  F    RPV L   +  YA A N F+F++ L++   DV+ +YS+GK+ LVFC ++KGA+  A +L+ T    M  G           + ++Q E++   +   + K     +  G  V +H+ GL  +DR  +E LF +G +RV+C+T+TLA GIN PA   II  T  +      Y +   S +LQM GRAGRP FDD G+ +IMT +D    Y ++ +G E VESQL +   E L AE+    ISD+  A+ W++ ++L+VR  +NP+ YA    R+  S    ++    +    +  + EL   +++ + E              +   + P+  GR+M+K  + F T+K +   P + SLEE L+      E++   +R+ EK+ LND+      R+RF     KG   KR      K F+L   CL G+  I D +L  +  +I     RI +  + + V      G + S+LLA+SL  ++W+      LL+Q+ GIG+     L   GI +F+ L    P KIE    R++P+G  +   +S  L   +++++ + E G+ G     A L+V LTR   S
Sbjct:   17 RSTFSFRYFNSLQSECFPVCFNSDSNMVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQKFGS-WGVSCLELTGDNETYNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFSDIALVLIDEVHLL-NDPRGAALEAIVSRIKMISRNPEM--KSSPLSHVRFLAVSATIPNIGDLAEWLNVPVQGVKRFGEEMRPVKLTSKVFGYAPAKNDFMFEKRLQNYIFDVLMQYSKGKSALVFCSTRKGAQEAAQRLSQT---AMTFGYSNPFI-----KSKEQLERLREASLSCSDKQMQSNILYG--VGYHNGGLCLKDRNLIESLFLKGDIRVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCETVESQLLSCVTEHLTAEIVQMTISDIVKAIEWMKCSYLYVRMKKNPQKYAI---RNGIS---YHNTEKHMEDICIEKVNELSRHQMIWMDE--------------DGFLLKPLDPGRLMTKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEIAWIQLRRTEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSIHDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYTGTFSSMLLAKSLYQKLWDD--SPFLLKQLPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSS-LPPEVDLKLEEAECGRQG----KAKLIVTLTRLPQS 778

[Close]

BLAST of NO04G02880 vs. NCBI_GenBank
Match: XP_006293226.1 (DExH-box ATP-dependent RNA helicase DExH17 isoform X2 [Capsella rubella] >EOA26124.1 hypothetical protein CARUB_v10019550mg [Capsella rubella])

HSP 1 Score: 424.5 bits (1090), Expect = 1.500e-114
Identity = 277/804 (34.45%), Postives = 433/804 (53.86%), Query Frame = 0

Query:  141 GEYRNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGD--MHRK--WRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDSA--GLREVAASHILFATPEKFDAVS--RDWRENLYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAAL--LPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVS-SPVRKAEKRSLNDLLK----RVRF----SKGIGIKRCTLPPHKAFVLVQACL-GNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVSQVEGKPGTRGNMATLVVELTR 925
            G +R+ + +R  NS+QS  + +C ++D N+VI+APTG GKT+  E  I RLL +S S     +H K   + VYI+P KAL Q++L DW  +F S +G+ C ELTGD+     R +  + I+  TPEKFDAVS  R     L   G + LVLIDE H L  DPRG+ALE+++ R+K++ ++  +  +  P + +R+LAVSAT+PN++DL  WL  PT  +  F    RPV L   +  YA A N FLF++ L++   D++ +YS+GK+ LVFC ++KGA+  A KLA T                   + ++Q E++   + + + K     +  G  V +H+ GL  +DR+ VE LF  G ++V+C+T+TLA GIN PA   +I  T  +      Y +   S +LQM GRAGRP FDD G+ +IMT ++    Y ++ +G EVVESQL     E L AE+    ISD+  A+ W++ ++L+VR  +NP +YA    +P+D         V   L+   L+ + EL   +++               +  +   + P   GR+M+K  + F T+K +   P   SL+E L+      E+S   +R+ EK++LND+      R+RF    +KG   KR      K FVL    L G+  + D ++  +A +I    SRI R  + + +      G   S LLA+SL  ++W+      LL+Q+ GIG+     L   G+ +F+ L    P +IE    R++P+G  +   +S  L   + ++V +V+ +   +  ++ L V LTR
Sbjct:   14 GNFRSAFSFRYFNSLQSECFPLCFHSDINMVISAPTGSGKTVLFELCILRLLSKSISKEGRFLHAKGALKTVYISPSKALVQEKLRDWNQKFNS-WGISCLELTGDNETYSTRNIQDADIILTTPEKFDAVSRYRVTSGGLGFFGDIALVLIDEVHLL-NDPRGAALEAIVSRIKILSSNHEL--RSSPLASVRLLAVSATIPNIEDLAEWLNVPTAGIKKFGEEMRPVKLTTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAL--------TYGYSNPFIKSREQLERLREASPMCSDKQMQSYILQG--VGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMCGRAGRPPFDDTGMVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYLYVRMKKNPENYAIKKGIPKDR--------VEKHLQELCLQKINELSRYQMI--------------WTDTDGFVLKPEEPGRLMTKYYLKFDTMKYIINAPTSYSLDEALHIVCRAEEISWIQLRRNEKKTLNDVNADKEGRLRFHINDNKGKRKKRIQTREEKLFVLANDWLTGDPSVHDLSMTQDANSICSNGSRIARCMKEYFIYKKNYKGTLSSTLLAKSLYQKLWDD--SPYLLKQLPGIGMVTAKALYSMGVRSFEALAEADPRRIEIVTGRKYPFGNTIKESLSS-LPPKVEIKVEEVDCQ---KQGISKLAVTLTR 775

[Close]

BLAST of NO04G02880 vs. NCBI_GenBank
Match: XP_023637797.1 (DExH-box ATP-dependent RNA helicase DExH17 isoform X1 [Capsella rubella])

HSP 1 Score: 424.5 bits (1090), Expect = 1.500e-114
Identity = 277/804 (34.45%), Postives = 433/804 (53.86%), Query Frame = 0

Query:  141 GEYRNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGD--MHRK--WRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDSA--GLREVAASHILFATPEKFDAVS--RDWRENLYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAAL--LPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVS-SPVRKAEKRSLNDLLK----RVRF----SKGIGIKRCTLPPHKAFVLVQACL-GNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVSQVEGKPGTRGNMATLVVELTR 925
            G +R+ + +R  NS+QS  + +C ++D N+VI+APTG GKT+  E  I RLL +S S     +H K   + VYI+P KAL Q++L DW  +F S +G+ C ELTGD+     R +  + I+  TPEKFDAVS  R     L   G + LVLIDE H L  DPRG+ALE+++ R+K++ ++  +  +  P + +R+LAVSAT+PN++DL  WL  PT  +  F    RPV L   +  YA A N FLF++ L++   D++ +YS+GK+ LVFC ++KGA+  A KLA T                   + ++Q E++   + + + K     +  G  V +H+ GL  +DR+ VE LF  G ++V+C+T+TLA GIN PA   +I  T  +      Y +   S +LQM GRAGRP FDD G+ +IMT ++    Y ++ +G EVVESQL     E L AE+    ISD+  A+ W++ ++L+VR  +NP +YA    +P+D         V   L+   L+ + EL   +++               +  +   + P   GR+M+K  + F T+K +   P   SL+E L+      E+S   +R+ EK++LND+      R+RF    +KG   KR      K FVL    L G+  + D ++  +A +I    SRI R  + + +      G   S LLA+SL  ++W+      LL+Q+ GIG+     L   G+ +F+ L    P +IE    R++P+G  +   +S  L   + ++V +V+ +   +  ++ L V LTR
Sbjct:   14 GNFRSAFSFRYFNSLQSECFPLCFHSDINMVISAPTGSGKTVLFELCILRLLSKSISKEGRFLHAKGALKTVYISPSKALVQEKLRDWNQKFNS-WGISCLELTGDNETYSTRNIQDADIILTTPEKFDAVSRYRVTSGGLGFFGDIALVLIDEVHLL-NDPRGAALEAIVSRIKILSSNHEL--RSSPLASVRLLAVSATIPNIEDLAEWLNVPTAGIKKFGEEMRPVKLTTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAL--------TYGYSNPFIKSREQLERLREASPMCSDKQMQSYILQG--VGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMCGRAGRPPFDDTGMVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYLYVRMKKNPENYAIKKGIPKDR--------VEKHLQELCLQKINELSRYQMI--------------WTDTDGFVLKPEEPGRLMTKYYLKFDTMKYIINAPTSYSLDEALHIVCRAEEISWIQLRRNEKKTLNDVNADKEGRLRFHINDNKGKRKKRIQTREEKLFVLANDWLTGDPSVHDLSMTQDANSICSNGSRIARCMKEYFIYKKNYKGTLSSTLLAKSLYQKLWDD--SPYLLKQLPGIGMVTAKALYSMGVRSFEALAEADPRRIEIVTGRKYPFGNTIKESLSS-LPPKVEIKVEEVDCQ---KQGISKLAVTLTR 775

[Close]

BLAST of NO04G02880 vs. NCBI_GenBank
Match: XP_017181270.1 (PREDICTED: DExH-box ATP-dependent RNA helicase DExH17-like [Malus domestica])

HSP 1 Score: 424.1 bits (1089), Expect = 2.000e-114
Identity = 276/823 (33.54%), Postives = 433/823 (52.61%), Query Frame = 0

Query:  131 FTVDLDREFGGEYRNLWPYRMLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRL----LLESESVGDMHRKWRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGD--SAGLREVAASHILFATPEKFDAVSRDWREN--LYLLGSVRLVLIDEAHFLGEDPRGSALESLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEAVFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKATLVFCGSKKGAETLASKLADTTSMVMRGGGGRXXRGQDSGRQQQQYEKVERFTGLQNQKLKDLLVSCGG---------AVAFHHAGLSAEDRACVEDLFQQGVVRVLCSTSTLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFDDRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISDLDGAMRWLQSTFLWVRAHRNPRHYAA--LLPRDNSSPEVDNSVGARLRAYMLRTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVSFQTIKILKALPFDASLEELLYACSCCPEVS-SPVRKAEKRSLNDLLK----RVRF----SKGIGIKRCTLPPHKAFVLVQACL-GNLEITDFTLKLEAETIMDTVSRIVRANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALCHKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNMRVSQVEGKPGTRGNMATLVVELTR 925
            +T+    +    +R+ + +R  NS+QS  + VC ++D N+V++APTG GKT+  E  I RL    L E   +G  +   + +YIAP KAL Q+++ DW  +FGS +G+ C ELTGD  S   R +  + I+  TPEKFDAV+R   ++  +     + L+LIDE H L  DPRG+ LE+++ R+K++  +  +    L  + +R LAVSAT+PN++DL  WL+ P   +  F    RPV L   +L Y  A N FLF++ L++   D++ +YS GK+ LVFC ++KGA+  A +L  T   VM  G           R+QQ             ++L++   SCG           V +H+ GLS +DR  +E LF +G ++VLC+T+TLA GIN PA   +I  T  +      Y +   S +LQM GRAGRP FDD G+ VIMT KD    Y ++ +G E+VESQL +   E L AE+    +S++  A+ W++ +FL+VR  +NP HY+   ++ +D         +   ++   L+ + EL   +++               + ++   + P+  GR+M+K  + F T+K +   P + SLE+ L+      E+S   +R++EK+ LND+      R+RF     KG   KR      K FVL   CL G+  + D +L  +  +I     RI R  + F +      GA  S+LLA+SL  ++W+      LL+Q+ GIG+     L   G+ +F  L    P +IE    R++P+G    HL   + +    + +   E +   +G +  LVV LTR
Sbjct:    4 YTLKSMSDLPAPFRSSFNFRYFNSLQSECFPVCFHSDTNMVVSAPTGSGKTVIFELCILRLLSRFLSEDGRLGRTNGTLKTIYIAPSKALVQEKVRDWNQKFGS-WGITCLELTGDNESYNXRNIQEADIILTTPEKFDAVTRYRAKDGGMSFFSDIALLLIDEVHLL-NDPRGAVLEAIVSRIKMLAQNPELKSSSL--AHVRFLAVSATIPNIEDLAEWLKVPVXGIKRFGEEMRPVKLTTKVLGYTPAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQRLTQT---VMAFGHSNPF---IKSREQQ-------------ERLREASFSCGDKQMQSYIPYGVGYHNGGLSMKDRNLIESLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGMVVIMTRKDTVHLYENLLNGCEMVESQLLSCLTEHLTAEIVQLTVSNIPRAIEWMKCSFLYVRMKKNPVHYSVRKVISKDR--------IEKHMQEVCLQKVNELSQHQMI--------------WTDKDGFLLKPLEPGRLMTKYYLKFDTMKHIMKTPVNCSLEDALHVICRAEEISWIQLRRSEKKLLNDINADKDGRLRFHXLGDKGRRQKRIQTREEKTFVLANDCLTGDPSVHDLSLTQDMNSICSNGCRIARCMKEFFIYQKNYKGALNSMLLAKSLYQKLWDD--SPYLLKQLPGIGMVTAKALHSMGVRSFDTLAEADPRRIEIVTGRKYPFG---NHLKESLHSLPPKVEMKXEENECQRQGKL-KLVVTLTR 775

The following BLAST results are available for this feature:

BLAST of NO04G02880 vs. NCBI_GenBank

BLAST of NO04G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28662.1	3.900e-288	74.01	Meiosis-specific DEAD-box helicase [Nannochloropsi...	[more]
CBN74377.1	5.900e-127	36.35	conserved unknown protein [Ectocarpus siliculosus]	[more]
PNR53527.1	2.800e-116	35.83	hypothetical protein PHYPA_007202 [Physcomitrella ...	[more]
XP_024376295.1	2.800e-116	35.83	DExH-box ATP-dependent RNA helicase DExH17-like is...	[more]
XP_022962158.1	1.400e-115	35.29	DExH-box ATP-dependent RNA helicase DExH17 [Cucurb...	[more]
XP_009334110.1	5.200e-115	33.82	PREDICTED: DExH-box ATP-dependent RNA helicase DEx...	[more]
XP_023527908.1	8.900e-115	35.12	DExH-box ATP-dependent RNA helicase DExH17 [Cucurb...	[more]
XP_006293226.1	1.500e-114	34.45	DExH-box ATP-dependent RNA helicase DExH17 isoform...	[more]
XP_023637797.1	1.500e-114	34.45	DExH-box ATP-dependent RNA helicase DExH17 isoform...	[more]
XP_017181270.1	2.000e-114	33.54	PREDICTED: DExH-box ATP-dependent RNA helicase DEx...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL081	nonsL081	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR058	ncniR058	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR111	ngnoR111	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK009530	NSK009530	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO04G02880.2	NO04G02880.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO04G02880.1	NO04G02880.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|668779	gene_2058	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100002g175	gene1921	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO04G02880.2	NO04G02880.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO04G02880.1	NO04G02880.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence

gene sequence

>NO04G02880 ID=NO04G02880|Name=NO04G02880|organism=Nannochloropsis oceanica|type=gene|length=6153bp
CACCCTCACACCTCCACAGCATACGACCAAAAGCGGTATACCGAACAAGA
CCAATTGGGGCTTTAAACCACTAGTAGCGTCATTCAGTGCCATGTCTTCC
TCCACTTGCTGTACCGGCTCTTCCTCAGCGTCTCCTCTTCGTCCTCCTTC
GCCGCGATTCCCTCCTCGTTCTTCCTTCTCTGTCATGCTAGAGGAGGGAT
CGGACGAGGATGAGGGAAAAGAGGAGGAGAATCTCCATCTCAATCTTGCT
CCTTTCAATCATGCTACGGGCTACAAAGATGACGACGTATATGAGCAGCA
ACATCAGCAACAGCAGCAAGGTCGGCAGCGACAGCAACCGCCGCCCTTTT
GTCCTTCCTCCTCCTCTTCGCCCCCCTCTTCCTCCTCCTTCTCCTCCTCC
TCGACGGGCACGGCGCCTGCGGATCGTAGCGCCAGTGACAATAGTTATGT
TGGTAGTAGTGGTAGACAGCAGCAACTGGGGTTTACGGTAGATTTGGACC
GGGAGTTTGGAGGGGAATATCGCAATTTGTGGCCGTATCGCATGCTGAAC
TCGGTGCAGAGCTCTTTTTGGGCCGTGTGCTTAAATACTGATCGAAACGT
AGTTATTGCAGCGCCAACAGGCGTGGGCAAAACGATGGCGTTGGAAGCAG
CGATTTGTCGGTTGCTCCTAGAGAGTGAAAGTGTGGGAGATATGCACCGA
AAGTGGAGGGTGGTTTACATAGCGCCGGTTAAGGCTTTGTGTCAGCAGAG
GCTATTAGATTGGCGGGCTCGTTTCGGGTCAAAGTTTGGATTGAAATGCG
CAGAGTTGACGGGGGATTCGGCGGGCTTGAGGGAGGTGGCAGCGTCTCAC
ATTTTATTTGCTACACCAGAAAAATTCGATGCCGTATCGAGAGATTGGCG
TGAGAATCTTTATTTGCTTGGTTCGGTCCGGTTAGTGCTGATCGATGAAG
CACATTTTTTAGGTGAGGACCCACGTGGATCGGCGCTCGAATCTCTGATT
TGTAGGCTGAAGGTGATTAAGACTCATAAAGGGATAGTGGAGAAGGGACT
GCCTGCAAGCAAAATGCGAATTCTCGCAGTGTCTGCCACGTTGCCTAATG
TCGATGATTTGGGAACATGGTTGGAGGCTCCCACGGAGGCGGTGTTCAAT
TTCGACTATACCTTTAGACCTGTACCGCTTGATGTgtgagtattctgagt
ggggcatatatttatttggatggagggtggcttgttataacattatgtgc
aagataatgcaaaagatccagtatctcatcaatattgactcttcctccca
ctttcagGCACATCCTGAGCTACGCCAACGCCAGTAACCCCTTTCTCTTC
CAACGCACGTTGGAGAGTCGGGCGATTGACGTGATCTCCAAGTACAGCGA
GGGCAAGGCAACGCTTGTCTTTTGTGGGTCGAAGAAGGGCGCGGAAACCT
TGGCTAGCAAGCTTGCTGACACGACCTCGATGGTAATGAGGGGCGGAGGC
GGAAGGCGAGGTCGAGGGCAGGATAGCGGGCGGCAGCAGCAGCAGTACGA
GAAGGTTGAGCGTTTCACAGGGTTGCAAAACCAGAAACTGAAAGACTTAC
TTGTGAGCTGCGGAGGTGCAGTCGCATTCCACCACGCGGGTTTGAGCGCT
GAGGATCGCGCGTGTGTCGAAGATTTGTTTCAACAAGGTGTGGTGCGCGT
GCTTTGTTCTACTTCTACATTGGCGCAGGGGATTAACAGTCCGGCGTTTC
TGGCTATTATCCTGGGAACCACCTTTTGGCGGGGCGCTGGTATAGGGTAC
GAGGACCTGCCGGTCTCGGCGGTGTTACAGATGATTGGGCGCGCCGGCCG
GCCCGGTTTTGACGATCGAGGAGTGGCTGTCATCATGACGAGCAAGGACA
AGGAGCTCGCTTACACGTCCATGGCTGATGGTCAAGAAGTGGTCGAGTCC
CAGCTTCCTGCCAGATTCCACGAAGCACTGAATGCGGAAGTCTGCTCTCA
CGTTATCTCTGACTTGGACGGGGCCATGCGATGGTTACAGTCAACCTTTT
TGTGGGTCCGTGCACATCGCAATCCTCGCCATTATGCTGCCCTCCTTCCC
CGCGACAACTCGAGTCCGGAAGTAGATAACAGCGTAGGAGCTCGGTTGAG
GGCTTACATGCTACGGACCTTAGCAGAGCTAGAGGCTGAGGAGGTTTTGC
GTTTAAGGGAGCCTACAATCAGTGGGAGCGCGATCGCAGACTTGAGCGCG
CAAAATTCGAAGACCGTGGTGCCAATGGTGGGGGGGCGAGTAATGAGCAA
AACGgtacgacacatgtcactatgactgaaactctttcccttttgtcttt
ttggtgttttcctacaagtactgttaggtttcactttttctttctcctac
tatgtcccaccacccccttcccccctacagATGGTCAGCTTTCAGACAAT
TAAGATCTTGAAGGCGCTGCCCTTTGACGCTAGTTTAGAGGAGCTGCTCT
ATGCTTGCAGCTGCTGTCCCGAGGTGAGCAGTCCTGTTCGTAAGGCCGAA
AAGCGTTCTCTAAACGATTTGCTTAAGCGCGTCCGCTTCTCCAAGGGAAT
CGGCATCAAGCGCTGCACCCTCCCGCCGCACAAAGCCTTCGTGTTGGTCC
AGGCCTGCCTTGGGAACCTGGAGATTACGGATTTCACATTAAAGgtatgt
ttgtctttgtgcgcgtcagaaaaagcgtacacttgctcgtaccggtgctc
gtataattgacgaacgtatgttgctgaagttaggatatacaaatcagtac
cgagctcgatctctattcaaatagcactccaatctaaactacatttgtca
gcgcctttttaaattgccccctcgctaatgcgccctccctctctcatact
ctactcacgctccttaaaagCTTGAGGCCGAGACCATCATGGACACCGTG
TCACGTATCGTCCGAGCCAATCAGCACTTTTGCGTCGACTCTGGTCGTGG
CGGGGGCGCTTACCTAAGTTTGCTGCTCGCTCGATCGTTGCGTGCACGCA
TGTGGGAGACAGAGCGTGACAAGTTATTGCTCCGGCAGGTAGAGGGGATT
GGTGTAGCGTTGTGTCATAAGCTCGGCTTGGCTGGAATCAGCACGTTCCA
GGATCTAGTAAATACGCTGCCTTCCAAGATTGAAGCCGCTTGCCATCGTC
GCCATCCGTGGGGGCTAGAGATGATTCACCTCGTCTCTGGGATTTTGAAT
AATTCTTTGAATATGCGCGTCTCGCAGGTTGAAGGCAAGCCAGGGACGCG
TGGTAACATGGCAACATTAGTGGTGGAGCTGACACGTTCGACTTCGAGCA
GTGGTGATGGGAGTAGCAATGATACGGAAGGACTCGAGTCCGGACTAATA
GCGGGACAAGGACGCAAGAAGTGGTGGTTGAATTCCACCATGGTTGCGTT
TTCTTCGGGTCCGGATTGCAACCTGCTGCTGTTTCGTGAGCTTTCTTTTC
CGTCCCCGTTGCCTTCTTCTAAATCAGGGGAAGGAGAGGAGGAAATGGTG
CACCGGATAGAGTTTACTGTGCCGAGCCCTTTGAAGCAACAGAGCAGAGA
TGGAGGGGACAAACGCTTTTGCATCACGCTGGCTTTGATTTCGCCCTTTA
TCTCTCTCGATTGCTTGCAGATCTTCTACCCGAGCTTTGCCGAGAACGGG
GCAAAAGGTGGCGGTGCGAGTCAAAGGAGGCTCTCAGAAACCAGAAGGAT
AGTGTCCACTCCGTCTTCTTCGTCCTCTTCCTTATCATCGTCACGACACA
CCACTGCCAGTGTACACTCTACAATCGACGCAATAACGCCCGTCGCTGAC
AACAAGCACCAGCCTGCTAACGCCCCGCCCAAGAAAGCCAAAGGGGGTAT
AGCTGCAGCTAATGTTTCTGCTGCTGCGTCGACCCTCTCTACTGCTTCTG
CCATCTCCGACGACAGACCCAACACTCTGCCGTCACATTTTCAGTACCAG
TGTGAACGCCAGAAACAACGAGAGCAAGAATTGCGGACGAGACGGGAGCA
GGAACTTGCGGTGCGGAGGGAAGAGTTGGCGCGTGAGCAGCGGCAGCGCC
GACGACAGGAACAGCAGCAGGAACATCAACAGCAGCAACAGCAGCAAGAA
GGCGACAGGTGTACCCAGGATGAAGCGTCAGCGGGAGTGGCAAAACTACA
ATGGCGAGCTCCGGAGCGAACAATGACGCAGCAGAAGCAACAAGAATTGA
CGAAAGAGTGGCACCTGCCGCAGGAACAGAAGCGGCAGCATGAGGAATGG
GCAAACATACATCGACAGCAGCAAGCACAACAGCGACAGCGACAAGTCGA
TAATACATTGCGACTGTCGTGTATGGCCCCGCCGTCCACCTCTGGACGTC
TGCCTGCGACAGCATCTATTACCGCGCCAATCTGCCGAACCAATGATCTC
TTCTCGAGTTTTCAATTTGCGCCATCGCAGCGGAGTCCCATCTTGGATCT
GAACGAGAAAAACAGCAGCGGTGATAACCTATCCTCCTCAACATCCTCGA
TCGAATCCTTTCAACGTCGCTACCCAGGGAGCAGCAGCATGGGCATCTTG
ACACCTCAGCCATTGCCTCCTCCCCCTCTCGCGCACACCTTCCAGACGGC
ATCGTTGTCTGCGATGGATTCCACGGGAGAGGCGGAACTCAGCCTGTTGC
ACGCTAAGGTGAGGGAATCACGCGCAGACCAAGTTCCAATTCACCGCATT
CCCAAAGCTGCACCCACAAACCTGGCCCCCGTCCTTATTACCGACACGAG
CTCTCTCCCCTTTCTCAAGGTCGTCGGTTCCTCCTCGCGTGTGGACACCA
TATCAGCAAGGGCACCAAGTGCAGCAACCACCTCGAAATTCTTTGGCCGT
ACCTATACCAGCCCCTTTCGAGGAAAGCAGCCGCAATCGTCTTCACCACC
GCAGGTCGCAACGTCTTGCTTTGGTGCCCTCTATCAATCGTGCAAAGCCC
CTACTGAGCAAATGCAGCATCAATTGCAGCACGACCTTCTGCAGAGCAAG
gtaaggaccgattgaaccggtgtatatatatgtggactggaggttataga
catattctccggatagctcaagactacactccacttttgtaacaaccgga
agttctccatcaaatttaatctttttcttgccaattgaaacacagCGAGT
CCGCTGTCAAGATGACTTTTGCGGTGGCCCTCAAGACGATGAGGACGAGA
AAGATGATCTGACGCTGCCCTCGCTGCCGACGCCGTACGGCTCGCCTCCT
CTGAGCATGCCCCCGTCTAATCACTCTGACAAACGCCCGTTCAAGCGATG
CGCGCCAATGTATAATCATCCTCTTCCTTTATCTCCTTCAGCGTACTACC
AAGGAGAGCAGCATTACTCCTACAACAACACCCCATCCCCTTCCCAGGCA
CTCGCGTTGACCTTCCAGCAAAAGCCGCAGAAACACAATGGATGTCTCCA
AGAAGCCTGTTATGGTGGCGATGGTGCTGCCGCGGGTTATGGTGTGGAAC
AGCAATCTGCAGAACTACCATCGGACTCCTTTGATTCGGCGGGCTTCATT
TGAGTGTGCGGATACTTTGTGTGTGTGTGTGTGTGAATAATTTTAGGTAA
GGATGGACGTGTACATCTTTGTGTATGTTTGAATTGCACAATAGCGTGAT
CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTGCATGAG
TATGCGGGAAATATTCGGAGTGCAGACGCACCCAGAATCAAATATCTACC
GGAATCAGAAGTCATGTATTTTGTTCTATCATTAAATTCGCCTTGAACAA
TTGTCTGATACCATACATGACTTTTAGAAGATATATGCACGAGTGATATA
ATGCAGGTAACGGACTGGGATCCCGAGCAAAGGGGAAAACTAAAAGCAAT
ACGGTCATAAATATATATACCTATAAATCTAGCTAGGACTTGATAAGACG
GAAATACTCACTACCACTCTGATATTGCCATACATAGCATCACTGCCTTG
TGGATGAGCATGCAGAATACCAGAGGAGCATAAGTGCTCAACTGCTCGCA
TGGGAGAGGACACCGCATGTGTGAGACAAAAAAGAAAATTACTTTCGATC
AGA

protein sequence of NO04G02880.2

>NO04G02880.2-protein ID=NO04G02880.2-protein|Name=NO04G02880.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1500bp
MSSSTCCTGSSSASPLRPPSPRFPPRSSFSVMLEEGSDEDEGKEEENLHL
NLAPFNHATGYKDDDVYEQQHQQQQQGRQRQQPPPFCPSSSSSPPSSSSF
SSSSTGTAPADRSASDNSYVGSSGRQQQLGFTVDLDREFGGEYRNLWPYR
MLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGD
MHRKWRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDSAGLREVA
ASHILFATPEKFDAVSRDWRENLYLLGSVRLVLIDEAHFLGEDPRGSALE
SLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEA
VFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKAT
LVFCGSKKGAETLASKLADTTSMVMRGGGGRRGRGQDSGRQQQQYEKVER
FTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCST
STLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFD
DRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISD
LDGAMRWLQSTFLWVRAHRNPRHYAALLPRDNSSPEVDNSVGARLRAYML
RTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVS
FQTIKILKALPFDASLEELLYACSCCPEVSSPVRKAEKRSLNDLLKRVRF
SKGIGIKRCTLPPHKAFVLVQACLGNLEITDFTLKLEAETIMDTVSRIVR
ANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALC
HKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNM
RVSQVEGKPGTRGNMATLVVELTRSTSSSGDGSSNDTEGLESGLIAGQGR
KKWWLNSTMVAFSSGPDCNLLLFRELSFPSPLPSSKSGEGEEEMVHRIEF
TVPSPLKQQSRDGGDKRFCITLALISPFISLDCLQIFYPSFAENGAKGGG
ASQRRLSETRRIVSTPSSSSSSLSSSRHTTASVHSTIDAITPVADNKHQP
ANAPPKKAKGGIAAANVSAAASTLSTASAISDDRPNTLPSHFQYQCERQK
QREQELRTRREQELAVRREELAREQRQRRRQEQQQEHQQQQQQQEGDRCT
QDEASAGVAKLQWRAPERTMTQQKQQELTKEWHLPQEQKRQHEEWANIHR
QQQAQQRQRQVDNTLRLSCMAPPSTSGRLPATASITAPICRTNDLFSSFQ
FAPSQRSPILDLNEKNSSGDNLSSSTSSIESFQRRYPGSSSMGILTPQPL
PPPPLAHTFQTASLSAMDSTGEAELSLLHAKVRESRADQVPIHRIPKAAP
TNLAPVLITDTSSLPFLKVVGSSSRVDTISARAPSAATTSKFFGRTYTSP
FRGKQPQSSSPPQVATSCFGALYQSCKAPTEQMQHQLQHDLLQSKVRTD*

protein sequence of NO04G02880.1

>NO04G02880.1-protein ID=NO04G02880.1-protein|Name=NO04G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1631bp
MSSSTCCTGSSSASPLRPPSPRFPPRSSFSVMLEEGSDEDEGKEEENLHL
NLAPFNHATGYKDDDVYEQQHQQQQQGRQRQQPPPFCPSSSSSPPSSSSF
SSSSTGTAPADRSASDNSYVGSSGRQQQLGFTVDLDREFGGEYRNLWPYR
MLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGD
MHRKWRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDSAGLREVA
ASHILFATPEKFDAVSRDWRENLYLLGSVRLVLIDEAHFLGEDPRGSALE
SLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEA
VFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKAT
LVFCGSKKGAETLASKLADTTSMVMRGGGGRRGRGQDSGRQQQQYEKVER
FTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCST
STLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFD
DRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISD
LDGAMRWLQSTFLWVRAHRNPRHYAALLPRDNSSPEVDNSVGARLRAYML
RTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVS
FQTIKILKALPFDASLEELLYACSCCPEVSSPVRKAEKRSLNDLLKRVRF
SKGIGIKRCTLPPHKAFVLVQACLGNLEITDFTLKLEAETIMDTVSRIVR
ANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALC
HKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNM
RVSQVEGKPGTRGNMATLVVELTRSTSSSGDGSSNDTEGLESGLIAGQGR
KKWWLNSTMVAFSSGPDCNLLLFRELSFPSPLPSSKSGEGEEEMVHRIEF
TVPSPLKQQSRDGGDKRFCITLALISPFISLDCLQIFYPSFAENGAKGGG
ASQRRLSETRRIVSTPSSSSSSLSSSRHTTASVHSTIDAITPVADNKHQP
ANAPPKKAKGGIAAANVSAAASTLSTASAISDDRPNTLPSHFQYQCERQK
QREQELRTRREQELAVRREELAREQRQRRRQEQQQEHQQQQQQQEGDRCT
QDEASAGVAKLQWRAPERTMTQQKQQELTKEWHLPQEQKRQHEEWANIHR
QQQAQQRQRQVDNTLRLSCMAPPSTSGRLPATASITAPICRTNDLFSSFQ
FAPSQRSPILDLNEKNSSGDNLSSSTSSIESFQRRYPGSSSMGILTPQPL
PPPPLAHTFQTASLSAMDSTGEAELSLLHAKVRESRADQVPIHRIPKAAP
TNLAPVLITDTSSLPFLKVVGSSSRVDTISARAPSAATTSKFFGRTYTSP
FRGKQPQSSSPPQVATSCFGALYQSCKAPTEQMQHQLQHDLLQSKRVRCQ
DDFCGGPQDDEDEKDDLTLPSLPTPYGSPPLSMPPSNHSDKRPFKRCAPM
YNHPLPLSPSAYYQGEQHYSYNNTPSPSQALALTFQQKPQKHNGCLQEAC
YGGDGAAAGYGVEQQSAELPSDSFDSAGFI*

Synonyms

Publications