jgi.p|Nanoce1779_2|668779, gene_2058 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|668779
Unique Namegene_2058
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:665642..671363 -

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Properties
Property NameValue
TranscriptId668865
ProteinId668779
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:665642..671363 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G02880NO04G02880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668779mRNA_2058-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668779mRNA_2058Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|668779

>mRNA_2058-protein ID=mRNA_2058-protein|Name=jgi.p|Nanoce1779_2|668779|organism=Nannochloropsis oceanica|type=polypeptide|length=1549bp
MSSSTCCTGSSSASPLRPPSPRFPPRSSFSVMLEEGSDEDEGKEEENLHL
NLAPFNHATGYKDDDVYEQQHQQQQQGRQRQQPPPFCPSSSSSPPSSSSF
SSSSTGTAPADRSASDNSYVGSSGRQQQLGFTVDLDREFGGEYRNLWPYR
MLNSVQSSFWAVCLNTDRNVVIAAPTGVGKTMALEAAICRLLLESESVGD
MHRKWRVVYIAPVKALCQQRLLDWRARFGSKFGLKCAELTGDSAGLREVA
ASHILFATPEKFDAVSRDWRENLYLLGSVRLVLIDEAHFLGEDPRGSALE
SLICRLKVIKTHKGIVEKGLPASKMRILAVSATLPNVDDLGTWLEAPTEA
VFNFDYTFRPVPLDVHILSYANASNPFLFQRTLESRAIDVISKYSEGKAT
LVFCGSKKGAETLASKLADTTSMVMRGGGGRRGRGQDSGRQQQQYEKVER
FTGLQNQKLKDLLVSCGGAVAFHHAGLSAEDRACVEDLFQQGVVRVLCST
STLAQGINSPAFLAIILGTTFWRGAGIGYEDLPVSAVLQMIGRAGRPGFD
DRGVAVIMTSKDKELAYTSMADGQEVVESQLPARFHEALNAEVCSHVISD
LDGAMRWLQSTFLWVRAHRNPRHYAALLPRDNSSPEVDNSVGARLRAYML
RTLAELEAEEVLRLREPTISGSAIADLSAQNSKTVVPMVGGRVMSKTMVS
FQTIKILKALPFDASLEELLYACSCCPEVSSPVRKAEKRSLNDLLKRVRF
SKGIGIKRCTLPPHKAFVLVQACLGNLEITDFTLKLEAETIMDTVSRIVR
ANQHFCVDSGRGGGAYLSLLLARSLRARMWETERDKLLLRQVEGIGVALC
HKLGLAGISTFQDLVNTLPSKIEAACHRRHPWGLEMIHLVSGILNNSLNM
RVSQVEGKPGTRGNMATLVVELTRSTSSSGDGSSNDTEGLESGLIAGQGR
KKWWLNSTMVAFSSGPDCNLLLFRELSFPSPLPSSKSGEGEEEMVHRIEF
TVPSPLKQQSRDGGDKRFCITLALISPFISLDCLQIFYPSFAENGAKGGG
ASQRRLSETRRIVSTPSSSSSSLSSSRHTTASVHSTIDAITPVADNKHQP
ANAPPKKAKGGIAAANVSAAASTLSTASAISDDRPNTLPSHFQYQCERQK
QREQELRTRREQELAVRREELAREQRQRRRQEQQQEHQQQQQQQEGDRCT
QDEASAGVAKLQWRAPERTMTQQKQQELTKEWHLPQEQKRQHEEWANIHR
QQQAQQRQRQVDNTLRLSCMAPPSTSGRLPATASITAPICRTNDLFSSFQ
FAPSQRSPILDLNEKNSSGDNLSSSTSSIESFQRRYPGSSSMGILTPQPL
PPPPLAHTFQTASLSAMDSTGEAELSLLHAKVATSCFGALYQSCKAPTEQ
MQHQLQHDLLQSKRVRCQDDFCGGPQDDEDEKDDLTLPSLPTPYGSPPLS
MPPSNHSDKRPFKRCAPMYNHPLPLSPSAYYQGEQHYSYNNTPSPSQALA
LTFQQKPQKHNGCLQEACYGGDGAAAGYGVEQQSAELPSDSFDSAGFI*
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Synonyms
Publications