NO03G05320, NO03G05320 (gene) Nannochloropsis oceanica

Overview
NameNO03G05320
Unique NameNO03G05320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2329
Alignment locationchr3:1517236..1519564 +

Link to JBrowse

Properties
Property NameValue
DescriptionU3 ribonucleoprotein (Utp) family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1517236..1519564 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
GO:0032040small-subunit processome
Vocabulary: INTERPRO
TermDefinition
IPR006709SSU_processome_Utp14
Homology
BLAST of NO03G05320 vs. NCBI_GenBank
Match: XP_002185123.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43255.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 184.9 bits (468), Expect = 9.200e-43
Identity = 112/277 (40.43%), Postives = 172/277 (62.09%), Query Frame = 0
Query:  277 PASGLTMEAMLNALENTKGYGNVRRRLSALVQDGKTAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNFAHNPVLQPSQAALIGKFAPETEMEKAVHDLLVHA----KADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRKAGIREGEREEDE 550
            P++ LT+++++  LE+TKG+G V++ +  + Q   TA  AP    V  RA+R + Y+++ K+V+ W+  +   RQAE+L+F     L+ S+  L+ KF P T+ EK +H+ L  A    + D   A E+  ++DL A  I+ E  K RR +LAKMRAL+FY +QKRH  NKIKSK Y RIRK+QRLR ++   E     +P   R++ E+E   R +ERMTL HKNTSKWA+++L+ G    +  ++TRRA++ Q   G++L +K     GE + D+
Sbjct:  126 PSANLTLDSLMKGLEDTKGFGVVQKTMKKIAQGHATA--APVARVVSERAQRKVHYEQQTKEVDKWIDAVQENRQAETLDFRPKERLEISRDVLVDKFVPTTDFEKQLHEALQEAGQLDEEDMLRAEERALQDDLGANEITMEEYKQRRGQLAKMRALMFYHEQKRHHMNKIKSKKYRRIRKKQRLRGKEGELEAEMEENPDLVRELQEKEEVDRMKERMTLAHKNTSKWARRILKRG---KNVDVDTRRALSAQNKRGDELLKKMYSGSGEEDGDD 397          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: CBN78720.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 180.3 bits (456), Expect = 2.300e-41
Identity = 112/264 (42.42%), Postives = 167/264 (63.26%), Query Frame = 0
Query:  281 LTMEAMLNALENTKGYGNVRRRLSALVQDGKT-AIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNFAHNPVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRKAGIREG 544
            +TME ++ +L+ +KG+  V+++++A    GK+ A  AP   T + RAER + Y  +KKD+  W+  + + R+AE+L+FA       S AAL  K    T+MEK V ++L+ A    E  + + E E+L+++  + E VK R+AEL+KMRAL+FY+++K+H  NKIKSK Y +I+KRQR RA D  +E    +   AARK        RA+ERM+LRHKNTSKW K  LRA   KG  G + R+A+ EQ+ +G++LR K G  +G
Sbjct:  302 VTMETLMGSLQKSKGFAAVKKQVAAF--SGKSGAPAAPVSKTAELRAEREMAYDNRKKDMGKWVAPVQANRKAETLDFAPTVKTNLSNAALASKMEATTDMEKEV-EMLLTAGGASEAGLAENEMEELKSKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSKVYRKIKKRQRDRAGDAQQEEEGELGEVAARK--------RAEERMSLRHKNTSKWVKNALRA---KGGAGKDDRKAIAEQLKIGQELRAKMGGVDG 551          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: OEU20562.1 (small-subunit processome [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 164.5 bits (415), Expect = 1.300e-36
Identity = 102/279 (36.56%), Postives = 167/279 (59.86%), Query Frame = 0
Query:  264 ALQSFPDSLFATG-PASGLTMEAMLNALENTKGYGNVRRRLSALVQDGKTAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNFAHNPVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEE----DLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRK 538
            A+   P+S ++      GLT++ ++  +++T+G+ ++++  +       +   AP    + +R ER + Y  + +D+  W+ +I   R+AESL+F     +Q ++  L+ KF P+T  EK + + L  A    E AV +GEEE    DL A  ++ E+ K RR +LA++RAL+FY ++K+H   KIKSK Y RIRK+QR R +++A E     D    +++ E+E   R QERMTL HKNTSKWAK++L+ G    +  ++TRRA++ Q+  G+ LRRK
Sbjct:  126 AMGKIPESDYSNSISKKGLTLDNLMEGIQDTQGFRDLQKSFT----KAPSTTPAPMDKKLASRVERKINYTARSRDISRWVEIIQENRKAESLDFKPKERVQLTRDILVEKFQPKTNFEKEIEEALEEAGQQDEEAVLKGEEEALQDDLGANRLTMEDYKKRRGQLAQIRALMFYHERKQHHIKKIKSKKYRRIRKKQRDRIKESAMEAAIEQDEDLGKELKEKEEVARIQERMTLAHKNTSKWAKRILKRG---KNVDVDTRRALSAQLKRGDDLRRK 397          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: OQR89030.1 (U3 small nucleolar RNA-associated protein [Thraustotheca clavata])

HSP 1 Score: 159.1 bits (401), Expect = 5.400e-35
Identity = 103/254 (40.55%), Postives = 154/254 (60.63%), Query Frame = 0
Query:  287 LNALENTKGYGNVRRRLSALVQDGKTAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNFAHN---PVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRK 538
            ++ ++       V+++L+ L +D  + + AP   T++ARA R + Y+EKKKD+  + P++ + R+ E+L+F +    P    S AAL  KF PE  +E+ V  LL  +    + A +Q E E+L+   +S E VK R+ ELAKMR ++FYE+QK  +  KIKSK YH+IR +Q  + E   R  LR +DP  A ++D E+A  RA+ERMTL+H NTSKW K  L  G     G   TR+A+ +QI  G++LRRK
Sbjct:  188 IDEIQPNANIAKVKQQLAQLERD-DSKLTAPLAPTLEARASRKVAYEEKKKDLAVFQPIVKANREKETLDFRNQGDVPANNLSVAALTSKFKPEKPLEQDVAALLATSGWSDKAAAKQ-EAEELEMNAVSAEEVKARQKELAKMRVMMFYEEQKHRRVKKIKSKLYHKIRNKQDAKRE---RAQLRELDPELADQLDREDAEKRAEERMTLKHNNTSKWVKHQLARGIQADQG---TRQAIHDQIRRGDELRRK 433          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: OQR91532.1 (U3 small nucleolar RNA-associated protein [Achlya hypogyna])

HSP 1 Score: 153.7 bits (387), Expect = 2.300e-33
Identity = 113/292 (38.70%), Postives = 161/292 (55.14%), Query Frame = 0
Query:  299 VRRRLSALVQDGKTAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNFAHN--PVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRKAGIREGEREEDEGVXXXXXXXXXXXGMDDAQRADVLRKRAAGKVRSLLGEV 589
            ++++ +AL +DG + + A     ++ARA R + Y EK K++E ++P++ + R  E+L+F       + PS A L  KF PE  ME  V  LL  A    + A    E E L+   ++PE V  R+ ELAKMRAL+FYE+QK  +  KIKSK YH+IR +Q  + E   R  LR +DP  A  MD EEA  RA+ERMTL+H NTSKW K  L  G    +G   TR+A+ +Q+  G++LRRK      E    E             G  + QR   L++R A K  +L+ E+
Sbjct:  205 LQKQFAALERDG-SQLAASLEPVLEARASRKVAYAEKAKELEVFVPVVRANRLKETLDFRQQGPTAVAPSVAGLTAKFQPEKPMETDVAKLLA-ASGWSDAAAAAAEGEALELNAVAPEEVAARQKELAKMRALMFYEEQKARRVKKIKSKLYHKIRNKQDAKRE---RAALRELDPELAASMDAEEAEKRAEERMTLKHNNTSKWVKHQLGRGLQADAG---TRQAIHDQLRRGDELRRKM-----ESVAHESDLSSDDDSDGEPGESETQR---LQRRLAKKASALVMEI 480          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: XP_021882069.1 (Utp14 protein-domain-containing protein [Lobosporangium transversale] >ORZ18274.1 Utp14 protein-domain-containing protein [Lobosporangium transversale])

HSP 1 Score: 152.1 bits (383), Expect = 6.600e-33
Identity = 112/285 (39.30%), Postives = 159/285 (55.79%), Query Frame = 0
Query:  274 ATGPAS-GLTMEAMLNALENTKGYGNVRRRLSAL---VQDGKT--AIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNFAHN--PVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRKAGIREGEREEDEG 551
            ATG  +  L M  +++ ++N  G+ ++++ +  L    + GKT   + AP P  VQ R  R   Y E KK+V  WLP++   RQAE L F  N  P+  PS A L  KF   T MEK +  +LV      +  +   E E+L    ++ E V+ RRAEL KMR L+F E+ +  + +KIKSK YH+I+K++R R   T  E +  +DP  AR+        RAQERMTL+HKNT KWAK  L+     G+   E+R+A+TEQI  GE+LRRK    + + E   G
Sbjct:  302 ATGTTNKKLDMLDLISTVQNEAGFSSLKKNVQTLENGPKKGKTVETLAAPLPKVVQDRLNRQAAYDEAKKEVTKWLPIVQQNRQAEHLAFPMNAPPIDTPSSATLASKFDASTPMEKEIQTVLVEGGMQEKKLM---EFEELSLNKMTTEEVERRRAELRKMRDLMFREELRAKRISKIKSKLYHKIKKKERERNALTT-EEMAELDPEQAREERLLAEQKRAQERMTLKHKNTGKWAKDQLK----HGNFDPESRQAITEQIERGERLRRKIQDVDSDEEMSGG 578          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: XP_016606282.1 (hypothetical protein SPPG_06642 [Spizellomyces punctatus DAOM BR117] >KNC98242.1 hypothetical protein SPPG_06642 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 147.5 bits (371), Expect = 1.600e-31
Identity = 101/273 (37.00%), Postives = 156/273 (57.14%), Query Frame = 0
Query:  283 MEAMLNALENTKGYGNVRRRLSALVQDGK---TAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNFAHNPV--LQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRKAGIREGEREEDEG 551
            +E ++ +L +  G+  ++++L+ L +        I AP P  VQ R +R   Y+E KK+V  W PL+   R+A+ L      +  +  S  AL+GKF   T +E  V  +L  +    +   +Q E E+   + IS E +  RRAELAKMRALLF+++QK+ +  KIKSKAY ++RK+ +++ ED + E L+ +DP  A +  +     RA+ERMTL+HKNT KWAKQ+L     +  G  ET RAV EQ+   E L+R+    E +  + +G
Sbjct:  313 LEDLMGSLGDEAGFATLKKQLAVLEKSTSKQMATIAAPLPKRVQDRYDRQAAYEETKKEVSKWAPLVKKNREADHLTLPTTDLSAVNNSSGALVGKFKASTSLESEVQKILEESYLLEK---KQKEMEEXXLKKISKEELMERRAELAKMRALLFFKEQKQKKIAKIKSKAYRKLRKKDKIK-EDLSLEELKRLDPQLAEQERDRLETERARERMTLKHKNTGKWAKQML----NRKDGDPETHRAVMEQLDKHEALKRRIKGFESDESDFDG 577          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: XP_009821558.1 (hypothetical protein H257_00526 [Aphanomyces astaci] >ETV89158.1 hypothetical protein H257_00526 [Aphanomyces astaci])

HSP 1 Score: 147.1 bits (370), Expect = 2.100e-31
Identity = 106/289 (36.68%), Postives = 165/289 (57.09%), Query Frame = 0
Query:  279 SGLTMEAMLNA----------------LENTKGYGNVRRRLSALVQDGKTAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNF---AHNPVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRKAGIREGEREED 549
            S LT+E +L A                ++++    +++++L+ L +D  + +QAPA   V+ARA R + Y +KKK ++ + P++ + R+ E+L+F       V   + A+L  KF PE  +E  V  LL  +    +T +++ E  +L A  +S + V+ R+ ELAKMRA++FY++QK  +  KIKSK YH+IR +Q  R E   R  LR +DP  A +MD +EA  RA+ERMTL+H NTSKW K  L  G G   G   TR A+ +Q+  G+ LR+K      + E+D
Sbjct:  189 SALTLEGLLGASITGLPGDDXXXXXXXVQSSTAVKSLKQQLAHLEKD-DSKLQAPAAPVVEARASRKVAYTDKKKQMDVFQPVVKANREKETLDFRAQGTQRVENLTVASLTSKFVPEKPLENDVAALLEASGWSDKTMLKE-EAAELAANEVSVDEVRARQGELAKMRAMMFYQEQKNKRIKKIKSKLYHKIRNKQEDRKE---RMALRELDPEFAAQMDADEAEKRAEERMTLKHTNTSKWVKHQLGRGIGADQG---TRSAIADQLRRGDDLRKKMQSVNPDSEDD 469          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: XP_008862561.1 (hypothetical protein H310_01274 [Aphanomyces invadans] >ETW08756.1 hypothetical protein H310_01274 [Aphanomyces invadans])

HSP 1 Score: 147.1 bits (370), Expect = 2.100e-31
Identity = 99/243 (40.74%), Postives = 148/243 (60.91%), Query Frame = 0
Query:  298 NVRRRLSALVQDGKTAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNF---AHNPVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRK 538
            +++++L++L +D  + +QAP    V+ARA R + Y +KKK ++ + P+I + R+ E+L+F    +  V   + A+L  KF PE  ME  V  LL  A    + ++ + E  +L A  IS + V+ R+ ELAKMRA++FY++QK  +  KIKSK YH+IR +Q  R E   R  LR +DP  A +MD E+A  RA+ERMTL+H NTSKW K  L  G     G   TR A+ +Q+  G+ LR+K
Sbjct:  225 SLKKQLASLEKD-DSRLQAPVAPVVEARASRKVAYADKKKQMDVFQPVIKANREKETLDFRTQGNQRVENITVASLTSKFVPEKPMENDVAALL-EASGWSDKSILKEEAAELAANEISVDEVRARQGELAKMRAMMFYQEQKNKRIKKIKSKLYHKIRNKQEDRKE---RMALRELDPEFAAQMDAEDAEKRAEERMTLKHTNTSKWVKHQLARGINADQG---TRSAIADQLRRGDDLRKK 459          
BLAST of NO03G05320 vs. NCBI_GenBank
Match: XP_010688852.1 (PREDICTED: uncharacterized protein C57A7.06 [Beta vulgaris subsp. vulgaris] >KMT02431.1 hypothetical protein BVRB_9g203840 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 142.5 bits (358), Expect = 5.200e-30
Identity = 105/278 (37.77%), Postives = 155/278 (55.76%), Query Frame = 0
Query:  266 QSFPDSLF-ATGPA-SG---LTMEAMLNALENTKGYGNVRRRLSALVQDGKTAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASARQAESLNFAH-NPVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVEQGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYHRIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTSKWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRK 538
            +++P+S F  TG   SG   +++E +L+ L  T  Y  +R+R+  + + G+T +QAP     + R ER   Y   KKD+  W PL+   R+A +L F   N +  PS  A+  +F P T+ EKA+    +    + E A +    + L+   IS E VK R+  LAKMR+LLF  + K     KIKSK YHR++K+++L+A     +     DP AAR++ E++   RA+ RMTLRHKN  KWAK+VL  G  K   G  T+ A+ EQ+ L   L RK
Sbjct:  105 EAYPESEFNPTGDVLSGNGQISIEDLLDPLRGTSDYSKLRKRIEHVEKKGET-VQAPLSRPERERVERGAAYDHTKKDITKWEPLVKRNREAPTLFFDQGNDMGLPSVGAIASEFKPRTDFEKAIAS--ISQNKEVEEAFKSDGAKLLELNKISVEEVKDRQDRLAKMRSLLFRHEMKAKHIKKIKSKTYHRLKKKEKLKAAPLDLQ----TDPEAARELAEKQERKRAEARMTLRHKNQGKWAKRVLERGLSKQDEG--TQAAIAEQLHLHNLLTRK 373          
The following BLAST results are available for this feature:
BLAST of NO03G05320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002185123.19.200e-4340.43predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBN78720.12.300e-4142.42conserved unknown protein [Ectocarpus siliculosus][more]
OEU20562.11.300e-3636.56small-subunit processome [Fragilariopsis cylindrus... [more]
OQR89030.15.400e-3540.55U3 small nucleolar RNA-associated protein [Thraust... [more]
OQR91532.12.300e-3338.70U3 small nucleolar RNA-associated protein [Achlya ... [more]
XP_021882069.16.600e-3339.30Utp14 protein-domain-containing protein [Lobospora... [more]
XP_016606282.11.600e-3137.00hypothetical protein SPPG_06642 [Spizellomyces pun... [more]
XP_009821558.12.100e-3136.68hypothetical protein H257_00526 [Aphanomyces astac... [more]
XP_008862561.12.100e-3140.74hypothetical protein H310_01274 [Aphanomyces invad... [more]
XP_010688852.15.200e-3037.77PREDICTED: uncharacterized protein C57A7.06 [Beta ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005338NSK005338Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05320.1NO03G05320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05320.1NO03G05320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05320 ID=NO03G05320|Name=NO03G05320|organism=Nannochloropsis oceanica|type=gene|length=2329bp
ACAGCAAATCAAAAACCCCACGAATGGGCTTGGTGCGACGACAAGGCCGG
CCGGCAGGTAAGGGCAAAGTCAAAGCTAAGAAGTGGGGTGGCGGCGATGG
CAACAAGAAAGCGGTGGCCGCTTTCACCAATAACAAGAGCAAGGGGAAGG
CCAGTAGCAGTAGCAGCAGCGCAGGCCCGAAGCAGCCGCGGCGACGGCCG
CAGGACATCTACGAGTACACGGACGAGGATACGGCACGCCATCGTCGGCC
TAGGGATGACGAGGACGATGGGAATTCCAAGTACAATTTTGTGCCAGGGG
GGGACGACGAGGAGATCGACGAGGATGGGGCGTTTGACTCGGAAGACGAG
AAACGTTATGGGGATTTGATGCGGCAGATCGAGGAGAACGACGAGACACG
GAAGAAGAGGAGGCGCAGCGATCGTGGTGAAGAAAGTGAAGAGGAGGACG
AGGACGAGGAGATGGATGCAGATCCCGAGGAAGGAGAGATGAGCTTGTCG
GACATGCTGGGTGGAGGTGGAAAGGCAGGAGGAGGGAAATTGGAGCAGGA
GCAGAAGAAGAAAAGTAAAAAGGCTGCTATGGAGCAGGAGGAGGAAAAGG
ATATGGAGGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAGGAGGACGAG
GACGACGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGATGACGACGA
GGAAGGAGACCACGACGGTCTGATGGACATGATCACCCAGCTGGCAGCCA
CGCAGCAACAGCAACAAGCGTCTTCTTCCTCTTCTTTCTCATCCTCCTCC
GCAGCCAACCAGGCGCTCCAGTCATTTCCCGACTCCCTCTTTGCCACCGG
CCCTGCCTCCGGCCTGACCATGGAGGCCATGCTCAATGCCCTGGAGAACA
CAAAAGGTTACGGCAACGTCCGTCGACGCCTCTCCGCCCTAGTCCAAGAC
GGCAAGACTGCGATCCAAGCCCCCGCGCCCTCAACTGTCCAAGCCCGTGC
AGAACGTTCCCTCGTATACAAGGAGAAGAAAAAAGACGTCGAAACCTGGC
TTCCCCTCATCGCCTCCGCCCGCCAAGCCGAATCCCTCAATTTCGCGCAT
AACCCAGTCCTCCAACCGTCCCAAGCGGCCTTAATTGGTAAGTTTGCACC
AGAAACGGAAATGGAAAAGGCCGTGCACGACCTCCTCGTCCATGCCAAAG
CGGACCGAGAAACAGCAGTCGAGCAAGGGGAAGAGGAGGACCTGCAGGCC
CGCGGCATCTCTCCTGAAAACGTCAAGATCCGTCGGGCGGAGTTGGCCAA
GATGCGTGCCCTGCTGTTTTACGAGCAGCAAAAGAGGCATCAAGCGAATA
AAATCAAGTCCAAGGCTTACCATCGCATCCGAAAGCGACAGCGGCTTCGG
GCCGAGGACACGGCGCGAGAGAATCTCCGCGCGGTCGACCCGGCTGCGGC
CCGTAAGATGGACGAGGAGGAGGCAGCAGGGAGGGCACAAGAAAGGATGA
CACTAAGGCATAAAAATACAAGCAAGTGGGCGAAGCAGGTGCTTCGGGCG
GGAGGGGGGAAGGGGTCGGGAGGGCTGGAGACACGACGGGCTGTAACGGA
ACAGATCTTGCTGGGGGAGCAGTTGAGGAGGAAGGCGGGAATCAGGGAGG
GGGAAAGGGAGGAGGATGAGGGAGTGGAGGAGGATGAGAGTGATGAGGAG
GGGTTGGAAGGGATGGACGATGCACAGAGGGCGGATGTGCTGAGGAAGAG
AGCGGCCGGGAAGGTGAGGTCGTTGCTCGGGGAGGTGGTGGAAGGAGGTA
AGGAGGGAGGGAAGGAGGGAGGGCTGATGGGTATGAAATTTATGACCCAG
GCGGTGGAGAAGCAGAGGGCTAAAGCTCAGGCAGAGGTGGAAAAGGTTTT
GAGGGAACTGGAGCAGCAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGGACATGTGGTGGAAGAGGCGGGGAGGAAGGGAGGGAGGAAG
GACATGGAGGGTTTGAGGGAGGGGTCGTTGCAGGTGGCAGGGGTGATGTG
GGGGGGCAGGGAGGGCGAGTTAAGGTGGCGGGACCCATCACTGTTGAAGG
AGGAGGAGGAGGGAGCGGTGGCAACAGTGGCAGCAGTAGCAGCGGCTCTG
CCTTTCCTTCCATTGGACAGGATTCGACGGGAGTTCAAGAGCCTCGGCTT
AAAGAGGCGCAAGCCCGTGGCCCTGTTAGTTTTGCCACAGAGGTTAAGAG
GGTAGCAGTAGCTGCAGTAGGAGCAGCGGCAGGAGCAGCAGCAGCGGTGC
ATAAGCGCGTGGCGTCGTTCGCTGTCAGC
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protein sequence of NO03G05320.1

>NO03G05320.1-protein ID=NO03G05320.1-protein|Name=NO03G05320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bp
MGLVRRQGRPAGKGKVKAKKWGGGDGNKKAVAAFTNNKSKGKASSSSSSA
GPKQPRRRPQDIYEYTDEDTARHRRPRDDEDDGNSKYNFVPGGDDEEIDE
DGAFDSEDEKRYGDLMRQIEENDETRKKRRRSDRGEESEEEDEDEEMDAD
PEEGEMSLSDMLGGGGKAGGGKLEQEQKKKSKKAAMEQEEEKDMEEEEEE
EEEEEEEDEDDEEEEEEGEEEEDDDEEGDHDGLMDMITQLAATQQQQQAS
SSSSFSSSSAANQALQSFPDSLFATGPASGLTMEAMLNALENTKGYGNVR
RRLSALVQDGKTAIQAPAPSTVQARAERSLVYKEKKKDVETWLPLIASAR
QAESLNFAHNPVLQPSQAALIGKFAPETEMEKAVHDLLVHAKADRETAVE
QGEEEDLQARGISPENVKIRRAELAKMRALLFYEQQKRHQANKIKSKAYH
RIRKRQRLRAEDTARENLRAVDPAAARKMDEEEAAGRAQERMTLRHKNTS
KWAKQVLRAGGGKGSGGLETRRAVTEQILLGEQLRRKAGIREGEREEDEG
VEEDESDEEGLEGMDDAQRADVLRKRAAGKVRSLLGEVVEGGKEGGKEGG
LMGMKFMTQAVEKQRAKAQAEVEKVLRELEQQEEEEEEEEEEEEEGHVVE
EAGRKGGRKDMEGLREGSLQVAGVMWGGREGELRWRDPSLLKEEEEGAVA
TVAAVAAALPFLPLDRIRREFKSLGLKRRKPVALLVLPQRLRG*
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Synonyms
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