NO03G04730, NO03G04730 (gene) Nannochloropsis oceanica

Overview
NameNO03G04730
Unique NameNO03G04730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1119
Alignment locationchr3:1346674..1347792 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1346674..1347792 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G04730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005410NSK005410Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04730.1NO03G04730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100035g24gene729Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04730.1NO03G04730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04730 ID=NO03G04730|Name=NO03G04730|organism=Nannochloropsis oceanica|type=gene|length=1119bp
TGGGCTGGTGAAGCTTGTGATTCAGGATGATGATGCTTTCTGCTCTCCAA
AAGACACGTCGTTCCGACTCACAGATCCTCCCCGCGCGACAGCGCCAGAC
CTAAGTGGGAGTTGCTACATTGCGCTAACCGTGCCAGATATCCTTACGAG
GTCCGTGGACAGATATGGTGGCAAGAAGATAGCCTGGCCAGCCATACCGC
CAGCAGCACTTTCCCCTCGCCAACTCTCGCGCTTTCCGGCTAACTCAATC
GGCTCACTCCCTGACATAACCCAGTACGCTCACTCATGTCACAATTCATG
TCACAAGCTTTTCACGCCCCCACACTCTATCGCAGTGCCCAGAGCGTGGC
TCAACGAACCCTGCATCAAACGTTGCCAAAATAAAAGCCACTACCAACCT
CCCCAGCTCTCCTCTGCCTCCTCTCCTCATACACCCACACGAGGCGAGTG
GGGCACGGCTGGTTGGCTTTTCTGACGCGACGTATCAAAATATTCATGTC
TTCTGCCTCTTCGTCGTGGAACCGTACTGGAGCTGCCATCCCTGCCTCAT
TTCCAAAGACATCCCAGCAGGAGGCCTCGAAGGAGGAGGGCCGAGAATTG
GAAACCTCAAGGGAGATGGTGAGGGAGCCGGGGTTGAATTTGCTGGTGGA
GGGAGGAGGAAAGGGAGATGAAGCAGGAAAGATTCCGCCGTTGGGACCAG
TGGGGGTGGGAGGGGAAGCAGTGCAGGCCTCGGATGACTCCAAGCCCATC
TTCAAAGACACCGCGTTCCTAAgtacgtatcgactgtttttttccttatc
tcgacttaatcattcaagtacatcacgatttaaattgatgctttccccta
ccatcccgcctatatccttaatactcccttgtctcgaccaccaaaatcat
agGACCCGAGCGCATTGTCCTGCGCATCCCGCGAGCCAGTGTTAATACCA
AGCTTAGGTGAATGAAAGGACTTTTAAAGCATATCATACGAAGAAGATAG
GACGATTTCAGACTAGAGACATACACATGTTTGTCATATTTTGGTTTTGA
CCCGAAGACCACATGAAAAGCACGCACGGCCTTCCATCATTCGAAAAAAA
AATGAGGCATGTCATTACA
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protein sequence of NO03G04730.1

>NO03G04730.1-protein ID=NO03G04730.1-protein|Name=NO03G04730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=112bp
MSSASSSWNRTGAAIPASFPKTSQQEASKEEGRELETSREMVREPGLNLL
VEGGGKGDEAGKIPPLGPVGVGGEAVQASDDSKPIFKDTAFLRPERIVLR
IPRASVNTKLR*
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Synonyms
Publications